RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W MIC12P38341 106 aa1.85□□□□□ -2.11
SLD5YDR489W YHR180WP38868 163 aa1.85□□□□□ -2.11
SLD5YDR489W YAR068WP39564 161 aa1.85□□□□□ -2.11
SLD5YDR489W IRC22P40006 225 aa1.85□□□□□ -2.11
SLD5YDR489W YRB1P41920 201 aaKnown RBP1.85□□□□□ -2.11
SLD5YDR489W PRM10P42946 383 aa1.85□□□□□ -2.11
SLD5YDR489W YNL010WP53981 241 aaKnown RBP1.85□□□□□ -2.11
SLD5YDR489W ABF2Q02486 183 aa1.85□□□□□ -2.11
SLD5YDR489W CDC123Q05791 360 aa1.85□□□□□ -2.11
SLD5YDR489W DCN1Q12395 269 aa1.85□□□□□ -2.11
SLD5YDR489W RAS2P01120 322 aaKnown RBP1.84□□□□□ -2.11
SLD5YDR489W RPL9AP05738 191 aaKnown RBP1.84□□□□□ -2.11
SLD5YDR489W URA6P15700 204 aa1.84□□□□□ -2.11
SLD5YDR489W SCL1P21243 252 aaKnown RBP1.84□□□□□ -2.11
SLD5YDR489W ERG28P40030 148 aa1.84□□□□□ -2.11
SLD5YDR489W RPL9BP51401 191 aaKnown RBP1.84□□□□□ -2.11
SLD5YDR489W MGA1P53050 456 aa1.84□□□□□ -2.11
SLD5YDR489W BRR6P53062 197 aa1.84□□□□□ -2.11
SLD5YDR489W YML096WQ04489 525 aa1.84□□□□□ -2.11
SLD5YDR489W NEJ1Q06148 342 aa1.84□□□□□ -2.11
SLD5YDR489W ATG39Q06159 398 aa1.84□□□□□ -2.11
SLD5YDR489W MHT1Q12525 324 aa1.84□□□□□ -2.11
SLD5YDR489W NCB2Q92317 146 aa1.84□□□□□ -2.11
SLD5YDR489W PPA2P28239 310 aa1.83□□□□□ -2.12
SLD5YDR489W PEX4P29340 183 aa1.83□□□□□ -2.12
SLD5YDR489W MDH3P32419 343 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
SLD5YDR489W TCA17P32613 152 aa1.83□□□□□ -2.12
SLD5YDR489W YBR063CP38083 404 aa1.83□□□□□ -2.12
SLD5YDR489W ALG13P53178 202 aa1.83□□□□□ -2.12
SLD5YDR489W MRPS8Q03799 155 aa1.83□□□□□ -2.12
SLD5YDR489W TRM12Q04235 462 aa1.83□□□□□ -2.12
SLD5YDR489W HEM25Q07534 307 aa1.83□□□□□ -2.12
SLD5YDR489W PSF1Q12488 208 aa1.83□□□□□ -2.12
SLD5YDR489W LSO2Q3E772 92 aaKnown RBP1.83□□□□□ -2.12
SLD5YDR489W MSW1P04803 379 aa1.82□□□□□ -2.12
SLD5YDR489W CDC33P07260 213 aaKnown RBP1.82□□□□□ -2.12
SLD5YDR489W YBR121C-AP0C5L4 52 aa1.82□□□□□ -2.12
SLD5YDR489W NHP6BP11633 99 aaKnown RBP1.82□□□□□ -2.12
SLD5YDR489W FCY2P17064 533 aa1.82□□□□□ -2.12
SLD5YDR489W SSO1P32867 290 aa1.82□□□□□ -2.12
SLD5YDR489W NUP57P48837 541 aa1.82□□□□□ -2.12
SLD5YDR489W CWC23P52868 283 aaPredicted RBP1.82□□□□□ -2.12
SLD5YDR489W FYV6P53913 173 aa1.82□□□□□ -2.12
SLD5YDR489W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SLD5YDR489W CDC28P00546 298 aaKnown RBP1.81□□□□□ -2.12
SLD5YDR489W REP2P03872 296 aa1.81□□□□□ -2.12
SLD5YDR489W SEC4P07560 215 aaKnown RBP1.81□□□□□ -2.12
SLD5YDR489W COQ1P18900 473 aa1.81□□□□□ -2.12
SLD5YDR489W PGA2P53903 129 aa1.81□□□□□ -2.12
SLD5YDR489W YHR086W-AQ3E746 53 aa1.81□□□□□ -2.12
SLD5YDR489W YDR157WA0A023PZE8 133 aa1.8□□□□□ -2.12
SLD5YDR489W CDC8P00572 216 aa1.8□□□□□ -2.12
SLD5YDR489W MEI4P29467 408 aa1.8□□□□□ -2.12
SLD5YDR489W PRP18P33411 251 aaPredicted RBP1.8□□□□□ -2.12
SLD5YDR489W TCD1P38756 429 aa1.8□□□□□ -2.12
SLD5YDR489W YNL194CP40169 301 aa1.8□□□□□ -2.12
SLD5YDR489W FAR7P43592 221 aa1.8□□□□□ -2.12
SLD5YDR489W RAD17P48581 401 aa1.8□□□□□ -2.12
SLD5YDR489W YGR219WP53307 113 aa1.8□□□□□ -2.12
SLD5YDR489W PRM15Q03262 622 aa1.8□□□□□ -2.12
SLD5YDR489W YML108WQ03759 105 aa1.8□□□□□ -2.12
SLD5YDR489W SSQ1Q05931 657 aaPredicted RBP1.8□□□□□ -2.12
SLD5YDR489W USB1Q12208 290 aaKnown RBP1.8□□□□□ -2.12
SLD5YDR489W DRS2P39524 1355 aa1.8□□□□□ -2.12
SLD5YDR489W JIP3O13555 125 aa1.79□□□□□ -2.12
SLD5YDR489W FBA1P14540 359 aaKnown RBP1.79□□□□□ -2.12
SLD5YDR489W DBF2P22204 572 aa1.79□□□□□ -2.12
SLD5YDR489W OAC1P32332 324 aa1.79□□□□□ -2.12
SLD5YDR489W SEC17P32602 292 aa1.79□□□□□ -2.12
SLD5YDR489W VMA11P32842 164 aa1.79□□□□□ -2.12
SLD5YDR489W APS1P35181 156 aa1.79□□□□□ -2.12
SLD5YDR489W TAF14P35189 244 aa1.79□□□□□ -2.12
SLD5YDR489W CBT1P36038 271 aaPredicted RBP1.79□□□□□ -2.12
SLD5YDR489W PHO88P38264 188 aaPredicted RBP1.79□□□□□ -2.12
SLD5YDR489W DOG2P38773 246 aa1.79□□□□□ -2.12
SLD5YDR489W AYR1P40471 297 aa1.79□□□□□ -2.12
SLD5YDR489W ADO1P47143 340 aaKnown RBP1.79□□□□□ -2.12
SLD5YDR489W PRM8P53174 237 aa1.79□□□□□ -2.12
SLD5YDR489W YDR248CQ03786 193 aa1.79□□□□□ -2.12
SLD5YDR489W LPP1Q04396 274 aa1.79□□□□□ -2.12
SLD5YDR489W ATO3Q12359 275 aa1.79□□□□□ -2.12
SLD5YDR489W GIS3Q12418 502 aa1.79□□□□□ -2.12
SLD5YDR489W YPR170W-BP0C5R9 85 aa1.78□□□□□ -2.12
SLD5YDR489W DDI2P0CH63 225 aa1.78□□□□□ -2.12
SLD5YDR489W DDI3P0CH64 225 aa1.78□□□□□ -2.12
SLD5YDR489W STE18P18852 110 aa1.78□□□□□ -2.12
SLD5YDR489W POP4P38336 279 aa1.78□□□□□ -2.12
SLD5YDR489W YKE4P40544 346 aa1.78□□□□□ -2.12
SLD5YDR489W BXI1P48558 297 aa1.78□□□□□ -2.12
SLD5YDR489W YNR062CP53748 327 aa1.78□□□□□ -2.12
SLD5YDR489W GRX3Q03835 250 aa1.78□□□□□ -2.12
SLD5YDR489W SPG3Q04398 127 aaPredicted RBP1.78□□□□□ -2.12
SLD5YDR489W JLP1Q12358 412 aa1.78□□□□□ -2.12
SLD5YDR489W RPL28P02406 149 aaKnown RBP1.77□□□□□ -2.13
SLD5YDR489W RPB4P20433 221 aaPredicted RBP1.77□□□□□ -2.13
SLD5YDR489W SVP26P38869 228 aa1.77□□□□□ -2.13
SLD5YDR489W YIL001WP40560 513 aa1.77□□□□□ -2.13
SLD5YDR489W CIS3P47001 227 aa1.77□□□□□ -2.13
SLD5YDR489W YMD8Q03697 442 aa1.77□□□□□ -2.13
SLD5YDR489W YLR156WP0CE96 114 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms