RNA–Protein interactions for RNA: YDR297W

SUR2, Transcript of Sphinganine C4-hydroxylase, yeast

Gene SUR2, Length 1,050 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUR2	YDR297W	BRR6	P53062	197 aa		4.24	□□□□□ -1.73
SUR2	YDR297W	ROG1	P53118	685 aa		4.24	□□□□□ -1.73
SUR2	YDR297W	MMS2	P53152	137 aa		4.24	□□□□□ -1.73
SUR2	YDR297W	MPA43	P53583	542 aa	Predicted RBP	4.24	□□□□□ -1.73
SUR2	YDR297W	YNL184C	P53876	108 aa		4.24	□□□□□ -1.73
SUR2	YDR297W	IDP3	P53982	420 aa	Known RBP	4.24	□□□□□ -1.73
SUR2	YDR297W	RSM23	Q01163	450 aa		4.24	□□□□□ -1.73
SUR2	YDR297W	CTL1	Q03220	320 aa	Known RBP	4.24	□□□□□ -1.73
SUR2	YDR297W	CGI121	Q03705	181 aa	Known RBP	4.24	□□□□□ -1.73
SUR2	YDR297W	RPC11	Q04307	110 aa	Predicted RBP	4.24	□□□□□ -1.73
SUR2	YDR297W	HNT3	Q08702	217 aa		4.24	□□□□□ -1.73
SUR2	YDR297W	SIA1	Q12212	622 aa		4.24	□□□□□ -1.73
SUR2	YDR297W	EPT1	P22140	391 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	INO2	P26798	304 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	MSK1	P32048	576 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	ACH1	P32316	526 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	PRY2	P36110	329 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	TRM7	P38238	310 aa	Known RBP	4.23	□□□□□ -1.73
SUR2	YDR297W	PCL5	P38794	229 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	GAT1	P43574	510 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	AVT4	P50944	713 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	ARO8	P53090	500 aa	Known RBP	4.23	□□□□□ -1.73
SUR2	YDR297W	YGR168C	P53293	376 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	TMA23	Q03525	211 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	RAV2	Q03956	351 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	YML053C	Q04978	212 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	SEI1	Q06058	285 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
SUR2	YDR297W	LDS2	Q08218	356 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	THP1	Q08231	455 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	YOR283W	Q12040	230 aa	Known RBP	4.23	□□□□□ -1.73
SUR2	YDR297W	YLR122C	Q12312	125 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	GEP5	Q12393	293 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	YLR099W-A	Q3E798	87 aa		4.23	□□□□□ -1.73
SUR2	YDR297W	FAB1	P34756	2278 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	MES1	P00958	751 aa	Known RBP	4.22	□□□□□ -1.73
SUR2	YDR297W	CPA1	P07258	411 aa	Known RBP	4.22	□□□□□ -1.73
SUR2	YDR297W	RPL31A	P0C2H8	113 aa	Known RBP	4.22	□□□□□ -1.73
SUR2	YDR297W	YLL053C	P0CD98	152 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	RPL18A	P0CX49	186 aa	Known RBP	4.22	□□□□□ -1.73
SUR2	YDR297W	RPL18B	P0CX50	186 aa	Known RBP	4.22	□□□□□ -1.73
SUR2	YDR297W	FCY2	P17064	533 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	PHO80	P20052	293 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	ARO7	P32178	256 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	FRE2	P36033	711 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SUR2	YDR297W	PAN3	P36102	679 aa	Predicted RBP	4.22	□□□□□ -1.73
SUR2	YDR297W	GMH1	P36125	273 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	YPT10	P38146	199 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	YBR137W	P38276	179 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	MTC4	P38335	694 aa	Known RBP	4.22	□□□□□ -1.73
SUR2	YDR297W	AYR1	P40471	297 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	GNA1	P43577	159 aa	Predicted RBP	4.22	□□□□□ -1.73
SUR2	YDR297W	XPT1	P47165	209 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	COS10	P52924	374 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	CDH1	P53197	566 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	FMP48	P53233	369 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	YNL033W	P53964	284 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	YNL019C	P53975	284 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	SED5	Q01590	340 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	ELC1	Q03071	99 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	HNT1	Q04344	158 aa	Known RBP	4.22	□□□□□ -1.73
SUR2	YDR297W	YMR034C	Q05131	434 aa	Predicted RBP	4.22	□□□□□ -1.73
SUR2	YDR297W	ATX2	Q12067	313 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	USV1	Q12132	391 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	PST1	Q12355	444 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	PRM4	Q12498	284 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	RIB3	Q99258	208 aa		4.22	□□□□□ -1.73
SUR2	YDR297W	SUC2	P00724	532 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	RAS2	P01120	322 aa	Known RBP	4.21	□□□□□ -1.74
SUR2	YDR297W	RPL28	P02406	149 aa	Known RBP	4.21	□□□□□ -1.74
SUR2	YDR297W	ADK1	P07170	222 aa	Known RBP	4.21	□□□□□ -1.74
SUR2	YDR297W	NUP2	P32499	720 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	SEC17	P32602	292 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	SDH3	P33421	198 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	UTP30	P36144	274 aa	Known RBP	4.21	□□□□□ -1.74
SUR2	YDR297W	PDX3	P38075	228 aa	Known RBP	4.21	□□□□□ -1.74
SUR2	YDR297W	FAA2	P39518	744 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	SMB1	P40018	196 aa	Known RBP	4.21	□□□□□ -1.74
SUR2	YDR297W	KRE29	P40026	464 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	YER076C	P40049	302 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	POP1	P41812	875 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	YGR026W	P53217	278 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	DAD3	P69850	94 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	TDA1	Q03533	586 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	COQ11	Q05892	277 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	YTH1	Q06102	208 aa	Predicted RBP	4.21	□□□□□ -1.74
SUR2	YDR297W	IRC13	Q08630	104 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	YPL245W	Q12179	454 aa	Known RBP	4.21	□□□□□ -1.74
SUR2	YDR297W	FRE7	Q12333	620 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	YGL194C-A	Q2V2P6	80 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	YKL018C-A	Q3E7A7	99 aa		4.21	□□□□□ -1.74
SUR2	YDR297W	VAR1	P02381	398 aa		4.2	□□□□□ -1.74
SUR2	YDR297W	GRX2	P17695	143 aa	Known RBP	4.2	□□□□□ -1.74
SUR2	YDR297W	STE4	P18851	423 aa		4.2	□□□□□ -1.74
SUR2	YDR297W	POF1	P25576	258 aa		4.2	□□□□□ -1.74
SUR2	YDR297W	YCR102C	P25608	368 aa		4.2	□□□□□ -1.74
SUR2	YDR297W	YOR062C	P36025	268 aa		4.2	□□□□□ -1.74
SUR2	YDR297W	FRM2	P37261	193 aa		4.2	□□□□□ -1.74
SUR2	YDR297W	YBR241C	P38142	488 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms