RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W DCC1P25559 380 aa1.75□□□□□ -2.13
SIR4YDR227W TRS20P38334 175 aa1.75□□□□□ -2.13
SIR4YDR227W DIA4P38705 446 aaPredicted RBP1.75□□□□□ -2.13
SIR4YDR227W EFM1P38732 585 aa1.75□□□□□ -2.13
SIR4YDR227W MPA43P53583 542 aaPredicted RBP1.75□□□□□ -2.13
SIR4YDR227W ALG9P53868 555 aaKnown RBP1.75□□□□□ -2.13
SIR4YDR227W PLP1Q04004 230 aa1.75□□□□□ -2.13
SIR4YDR227W POS5Q06892 414 aa1.75□□□□□ -2.13
SIR4YDR227W UIP4Q08926 304 aa1.75□□□□□ -2.13
SIR4YDR227W HMS1Q12398 434 aa1.75□□□□□ -2.13
SIR4YDR227W CMD1P06787 147 aaKnown RBP1.75□□□□□ -2.13
SIR4YDR227W RPS19AP07280 144 aaKnown RBP1.75□□□□□ -2.13
SIR4YDR227W RPS19BP07281 144 aaPredicted RBP1.75□□□□□ -2.13
SIR4YDR227W BAR1P12630 587 aa1.75□□□□□ -2.13
SIR4YDR227W PET9P18239 318 aaKnown RBP1.75□□□□□ -2.13
SIR4YDR227W MGT1P26188 188 aa1.75□□□□□ -2.13
SIR4YDR227W PEX3P28795 441 aa1.75□□□□□ -2.13
SIR4YDR227W OAR1P35731 278 aa1.75□□□□□ -2.13
SIR4YDR227W YBR096WP38256 230 aa1.75□□□□□ -2.13
SIR4YDR227W MOG1P47123 218 aa1.75□□□□□ -2.13
SIR4YDR227W YNL040WP53960 456 aaPredicted RBP1.75□□□□□ -2.13
SIR4YDR227W UBC7Q02159 165 aa1.75□□□□□ -2.13
SIR4YDR227W SCS7Q03529 384 aa1.75□□□□□ -2.13
SIR4YDR227W UTP15Q04305 513 aaKnown RBP1.75□□□□□ -2.13
SIR4YDR227W GMC1Q04399 608 aa1.75□□□□□ -2.13
SIR4YDR227W DPP1Q05521 289 aa1.75□□□□□ -2.13
SIR4YDR227W IES4Q08561 116 aa1.75□□□□□ -2.13
SIR4YDR227W CPA1P07258 411 aaKnown RBP1.74□□□□□ -2.13
SIR4YDR227W YOL163WP0CF20 169 aa1.74□□□□□ -2.13
SIR4YDR227W URE2P23202 354 aaKnown RBP1.74□□□□□ -2.13
SIR4YDR227W MRPS5P33759 307 aa1.74□□□□□ -2.13
SIR4YDR227W YGP1P38616 354 aaKnown RBP1.74□□□□□ -2.13
SIR4YDR227W PEX17P40155 199 aa1.74□□□□□ -2.13
SIR4YDR227W MDV1P47025 714 aa1.74□□□□□ -2.13
SIR4YDR227W BXI1P48558 297 aa1.74□□□□□ -2.13
SIR4YDR227W SDC1Q03323 175 aa1.74□□□□□ -2.13
SIR4YDR227W HSP31Q04432 237 aa1.74□□□□□ -2.13
SIR4YDR227W PAL1Q05518 499 aaKnown RBP1.74□□□□□ -2.13
SIR4YDR227W YPR170W-BP0C5R9 85 aa1.74□□□□□ -2.13
SIR4YDR227W CBS2P14905 389 aa1.74□□□□□ -2.13
SIR4YDR227W ERG4P25340 473 aa1.74□□□□□ -2.13
SIR4YDR227W YCR023CP25351 611 aa1.74□□□□□ -2.13
SIR4YDR227W CNE1P27825 502 aa1.74□□□□□ -2.13
SIR4YDR227W MRPL6P32904 214 aa1.74□□□□□ -2.13
SIR4YDR227W SEC66P33754 206 aa1.74□□□□□ -2.13
SIR4YDR227W ECM31P38122 312 aa1.74□□□□□ -2.13
SIR4YDR227W MRP21P38175 177 aa1.74□□□□□ -2.13
SIR4YDR227W HAC1P41546 238 aa1.74□□□□□ -2.13
SIR4YDR227W PFA4Q12006 378 aa1.74□□□□□ -2.13
SIR4YDR227W MHF1Q3E835 90 aa1.74□□□□□ -2.13
SIR4YDR227W MAK31P23059 88 aa1.74□□□□□ -2.13
SIR4YDR227W RNA14P25298 677 aaKnown RBP1.74□□□□□ -2.13
SIR4YDR227W PTC1P35182 281 aa1.74□□□□□ -2.13
SIR4YDR227W FRE2P36033 711 aa1.74□□□□□ -2.13
SIR4YDR227W EDC3P39998 551 aaKnown RBP1.74□□□□□ -2.13
SIR4YDR227W YIL060WP40519 144 aa1.74□□□□□ -2.13
SIR4YDR227W SYG1P40528 902 aa1.74□□□□□ -2.13
SIR4YDR227W PRS5Q12265 496 aaKnown RBP1.74□□□□□ -2.13
SIR4YDR227W JIP3O13555 125 aa1.73□□□□□ -2.13
SIR4YDR227W SAM35P14693 329 aa1.73□□□□□ -2.13
SIR4YDR227W FCY2P17064 533 aa1.73□□□□□ -2.13
SIR4YDR227W PEX4P29340 183 aa1.73□□□□□ -2.13
SIR4YDR227W MRPL3P36516 390 aa1.73□□□□□ -2.13
SIR4YDR227W SLM1P40485 686 aa1.73□□□□□ -2.13
SIR4YDR227W YGR219WP53307 113 aa1.73□□□□□ -2.13
SIR4YDR227W RMI1Q02685 241 aa1.73□□□□□ -2.13
SIR4YDR227W MCH1Q07376 486 aa1.73□□□□□ -2.13
SIR4YDR227W GAT3Q07928 141 aa1.73□□□□□ -2.13
SIR4YDR227W SRL2Q12020 392 aa1.73□□□□□ -2.13
SIR4YDR227W STF2P16965 84 aa1.73□□□□□ -2.13
SIR4YDR227W YCH1P42937 148 aa1.73□□□□□ -2.13
SIR4YDR227W YLR053CQ12026 108 aa1.73□□□□□ -2.13
SIR4YDR227W YOR283WQ12040 230 aaKnown RBP1.73□□□□□ -2.13
SIR4YDR227W NAG1Q8TGN9 163 aa1.73□□□□□ -2.13
SIR4YDR227W DET1Q99288 334 aaKnown RBP1.73□□□□□ -2.13
SIR4YDR227W RAD52P06778 471 aaKnown RBP1.73□□□□□ -2.13
SIR4YDR227W RPL2AP0CX45 254 aaKnown RBP1.73□□□□□ -2.13
SIR4YDR227W RPL2BP0CX46 254 aaKnown RBP1.73□□□□□ -2.13
SIR4YDR227W IFM1P25038 676 aa1.73□□□□□ -2.13
SIR4YDR227W ROX3P25046 220 aa1.73□□□□□ -2.13
SIR4YDR227W LHP1P33399 275 aaKnown RBP1.73□□□□□ -2.13
SIR4YDR227W MRPL24P36525 258 aaPredicted RBP1.73□□□□□ -2.13
SIR4YDR227W HAT2P39984 401 aa1.73□□□□□ -2.13
SIR4YDR227W YIL029CP40538 142 aa1.73□□□□□ -2.13
SIR4YDR227W ERJ5P43613 295 aaPredicted RBP1.73□□□□□ -2.13
SIR4YDR227W YGL034CP53186 121 aa1.73□□□□□ -2.13
SIR4YDR227W YNR062CP53748 327 aa1.73□□□□□ -2.13
SIR4YDR227W CDC14Q00684 551 aa1.73□□□□□ -2.13
SIR4YDR227W SCW10Q04951 389 aa1.73□□□□□ -2.13
SIR4YDR227W YLR446WQ06204 433 aa1.73□□□□□ -2.13
SIR4YDR227W ENB1Q08299 606 aa1.73□□□□□ -2.13
SIR4YDR227W YPR063CQ12160 140 aa1.73□□□□□ -2.13
SIR4YDR227W ATP16Q12165 160 aa1.73□□□□□ -2.13
SIR4YDR227W RKI1Q12189 258 aa1.73□□□□□ -2.13
SIR4YDR227W SFM1Q12314 213 aa1.73□□□□□ -2.13
SIR4YDR227W FLO9P39712 1322 aa1.73□□□□□ -2.13
SIR4YDR227W CYC7P00045 113 aa1.72□□□□□ -2.13
SIR4YDR227W HIS3P06633 220 aa1.72□□□□□ -2.13
SIR4YDR227W URA6P15700 204 aa1.72□□□□□ -2.13
SIR4YDR227W PHO13P19881 312 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 143.4 ms