RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A ABF2Q02486 183 aa2.11□□□□□ -2.07
YDR170W-AYDR170W-A NIP7Q08962 181 aaKnown RBP2.11□□□□□ -2.07
YDR170W-AYDR170W-A LSO2Q3E772 92 aaKnown RBP2.11□□□□□ -2.07
YDR170W-AYDR170W-A RSM25P40496 264 aa2.1□□□□□ -2.07
YDR170W-AYDR170W-A FIS1P40515 155 aa2.1□□□□□ -2.07
YDR170W-AYDR170W-A ADO1P47143 340 aaKnown RBP2.1□□□□□ -2.07
YDR170W-AYDR170W-A YJR146WP47174 117 aa2.1□□□□□ -2.07
YDR170W-AYDR170W-A YML096WQ04489 525 aa2.1□□□□□ -2.07
YDR170W-AYDR170W-A VPS68Q12016 184 aa2.1□□□□□ -2.07
YDR170W-AYDR170W-A JLP1Q12358 412 aa2.1□□□□□ -2.07
YDR170W-AYDR170W-A YDR157WA0A023PZE8 133 aa2.09□□□□□ -2.08
YDR170W-AYDR170W-A SCO1P23833 295 aa2.09□□□□□ -2.08
YDR170W-AYDR170W-A SCM4P32564 187 aa2.09□□□□□ -2.08
YDR170W-AYDR170W-A SMD3P43321 101 aaKnown RBP2.09□□□□□ -2.08
YDR170W-AYDR170W-A YGR026WP53217 278 aa2.09□□□□□ -2.08
YDR170W-AYDR170W-A MRPS17Q03246 237 aaPredicted RBP2.09□□□□□ -2.08
YDR170W-AYDR170W-A YMR226CQ05016 267 aaKnown RBP2.09□□□□□ -2.08
YDR170W-AYDR170W-A SSQ1Q05931 657 aaPredicted RBP2.09□□□□□ -2.08
YDR170W-AYDR170W-A CDC28P00546 298 aaKnown RBP2.08□□□□□ -2.08
YDR170W-AYDR170W-A TAF14P35189 244 aa2.08□□□□□ -2.08
YDR170W-AYDR170W-A ECM33P38248 429 aaKnown RBP2.08□□□□□ -2.08
YDR170W-AYDR170W-A YAR068WP39564 161 aa2.08□□□□□ -2.08
YDR170W-AYDR170W-A FAR7P43592 221 aa2.08□□□□□ -2.08
YDR170W-AYDR170W-A IRC18P47056 224 aa2.08□□□□□ -2.08
YDR170W-AYDR170W-A BXI1P48558 297 aa2.08□□□□□ -2.08
YDR170W-AYDR170W-A COS6P53344 381 aa2.08□□□□□ -2.08
YDR170W-AYDR170W-A CUS2P53830 285 aaPredicted RBP2.08□□□□□ -2.08
YDR170W-AYDR170W-A YDR248CQ03786 193 aa2.08□□□□□ -2.08
YDR170W-AYDR170W-A ATG39Q06159 398 aa2.08□□□□□ -2.08
YDR170W-AYDR170W-A SUE1Q06524 206 aa2.08□□□□□ -2.08
YDR170W-AYDR170W-A RDS3Q06835 107 aaPredicted RBP2.08□□□□□ -2.08
YDR170W-AYDR170W-A AKR2Q12013 749 aa2.08□□□□□ -2.08
YDR170W-AYDR170W-A YHR032W-AP0C5N6 59 aa2.07□□□□□ -2.08
YDR170W-AYDR170W-A FCY2P17064 533 aa2.07□□□□□ -2.08
YDR170W-AYDR170W-A DBF2P22204 572 aa2.07□□□□□ -2.08
YDR170W-AYDR170W-A IDH1P28834 360 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
YDR170W-AYDR170W-A YBR063CP38083 404 aa2.07□□□□□ -2.08
YDR170W-AYDR170W-A MED6P38782 295 aa2.07□□□□□ -2.08
YDR170W-AYDR170W-A CTR2P38865 189 aa2.07□□□□□ -2.08
YDR170W-AYDR170W-A RFC4P40339 323 aaKnown RBP2.07□□□□□ -2.08
YDR170W-AYDR170W-A DSK2P48510 373 aa2.07□□□□□ -2.08
YDR170W-AYDR170W-A SLM2P53955 656 aa2.07□□□□□ -2.08
YDR170W-AYDR170W-A YMD8Q03697 442 aa2.07□□□□□ -2.08
YDR170W-AYDR170W-A DRS2P39524 1355 aa2.06□□□□□ -2.08
YDR170W-AYDR170W-A APS1P35181 156 aa2.06□□□□□ -2.08
YDR170W-AYDR170W-A DOG2P38773 246 aa2.06□□□□□ -2.08
YDR170W-AYDR170W-A DOG1P38774 246 aa2.06□□□□□ -2.08
YDR170W-AYDR170W-A IKI1P38874 309 aa2.06□□□□□ -2.08
YDR170W-AYDR170W-A IRC22P40006 225 aa2.06□□□□□ -2.08
YDR170W-AYDR170W-A SNX4P47057 423 aa2.06□□□□□ -2.08
YDR170W-AYDR170W-A PRM8P53174 237 aa2.06□□□□□ -2.08
YDR170W-AYDR170W-A CDD1Q06549 142 aa2.06□□□□□ -2.08
YDR170W-AYDR170W-A GET4Q12125 312 aa2.06□□□□□ -2.08
YDR170W-AYDR170W-A HTB1P02293 131 aaKnown RBP2.05□□□□□ -2.08
YDR170W-AYDR170W-A HTB2P02294 131 aa2.05□□□□□ -2.08
YDR170W-AYDR170W-A GRX2P17695 143 aaKnown RBP2.05□□□□□ -2.08
YDR170W-AYDR170W-A RFA3P26755 122 aaKnown RBP2.05□□□□□ -2.08
YDR170W-AYDR170W-A OAC1P32332 324 aa2.05□□□□□ -2.08
YDR170W-AYDR170W-A PDR17P53844 350 aa2.05□□□□□ -2.08
YDR170W-AYDR170W-A YNL010WP53981 241 aaKnown RBP2.05□□□□□ -2.08
YDR170W-AYDR170W-A YRA1Q12159 226 aaKnown RBP2.05□□□□□ -2.08
YDR170W-AYDR170W-A EMC6Q12431 108 aa2.05□□□□□ -2.08
YDR170W-AYDR170W-A RPL9AP05738 191 aaKnown RBP2.04□□□□□ -2.08
YDR170W-AYDR170W-A GCN3P14741 305 aa2.04□□□□□ -2.08
YDR170W-AYDR170W-A TCA17P32613 152 aa2.04□□□□□ -2.08
YDR170W-AYDR170W-A MGM101P32787 269 aaKnown RBP2.04□□□□□ -2.08
YDR170W-AYDR170W-A VMA11P32842 164 aa2.04□□□□□ -2.08
YDR170W-AYDR170W-A RPL9BP51401 191 aaKnown RBP2.04□□□□□ -2.08
YDR170W-AYDR170W-A RGM1Q00453 211 aa2.04□□□□□ -2.08
YDR170W-AYDR170W-A MHT1Q12525 324 aa2.04□□□□□ -2.08
YDR170W-AYDR170W-A TUS1Q06412 1307 aa2.04□□□□□ -2.08
YDR170W-AYDR170W-A SEC4P07560 215 aaKnown RBP2.03□□□□□ -2.08
YDR170W-AYDR170W-A PUT1P09368 476 aa2.03□□□□□ -2.08
YDR170W-AYDR170W-A YPR170W-BP0C5R9 85 aa2.03□□□□□ -2.08
YDR170W-AYDR170W-A MATALPHA2P0CY08 210 aa2.03□□□□□ -2.08
YDR170W-AYDR170W-A HMLALPHA2P0CY09 210 aa2.03□□□□□ -2.08
YDR170W-AYDR170W-A CBF1P17106 351 aa2.03□□□□□ -2.08
YDR170W-AYDR170W-A YCR087C-AP37263 153 aa2.03□□□□□ -2.08
YDR170W-AYDR170W-A CGI121Q03705 181 aaKnown RBP2.03□□□□□ -2.08
YDR170W-AYDR170W-A LPP1Q04396 274 aa2.03□□□□□ -2.08
YDR170W-AYDR170W-A ARR2Q06597 130 aa2.03□□□□□ -2.08
YDR170W-AYDR170W-A ABP140Q08641 628 aaKnown RBP2.03□□□□□ -2.08
YDR170W-AYDR170W-A PSF1Q12488 208 aa2.03□□□□□ -2.08
YDR170W-AYDR170W-A CDC8P00572 216 aa2.02□□□□□ -2.09
YDR170W-AYDR170W-A MSW1P04803 379 aa2.02□□□□□ -2.09
YDR170W-AYDR170W-A ATG22P25568 528 aa2.02□□□□□ -2.09
YDR170W-AYDR170W-A YOR062CP36025 268 aa2.02□□□□□ -2.09
YDR170W-AYDR170W-A POP4P38336 279 aa2.02□□□□□ -2.09
YDR170W-AYDR170W-A BMT5P40493 336 aa2.02□□□□□ -2.09
YDR170W-AYDR170W-A MNN5P46982 586 aa2.02□□□□□ -2.09
YDR170W-AYDR170W-A GET1P53192 235 aa2.02□□□□□ -2.09
YDR170W-AYDR170W-A PRM15Q03262 622 aa2.02□□□□□ -2.09
YDR170W-AYDR170W-A YCL012CQ8J0M4 134 aa2.02□□□□□ -2.09
YDR170W-AYDR170W-A REP2P03872 296 aa2.01□□□□□ -2.09
YDR170W-AYDR170W-A YPK2P18961 677 aa2.01□□□□□ -2.09
YDR170W-AYDR170W-A SPS18P32572 300 aa2.01□□□□□ -2.09
YDR170W-AYDR170W-A GRE3P38715 327 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
YDR170W-AYDR170W-A YIL001WP40560 513 aa2.01□□□□□ -2.09
YDR170W-AYDR170W-A DAD3P69850 94 aa2.01□□□□□ -2.09
YDR170W-AYDR170W-A NEJ1Q06148 342 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms