RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C RPE1P46969 238 aa1.03□□□□□ -2.24
VPS54YDR027C CPR7P47103 393 aa1.03□□□□□ -2.24
VPS54YDR027C RRP17Q04031 235 aaPredicted RBP1.03□□□□□ -2.24
VPS54YDR027C GTO3Q04806 366 aa1.03□□□□□ -2.24
VPS54YDR027C YPR098CQ06089 161 aa1.03□□□□□ -2.24
VPS54YDR027C DXO1Q06349 442 aa1.03□□□□□ -2.24
VPS54YDR027C COQ10Q08058 207 aa1.03□□□□□ -2.24
VPS54YDR027C YBL112CQ3E7Y4 105 aa1.03□□□□□ -2.24
VPS54YDR027C YKR104WP0CE69 306 aa1.03□□□□□ -2.24
VPS54YDR027C YCR102CP25608 368 aa1.03□□□□□ -2.24
VPS54YDR027C SRB4P32569 687 aa1.03□□□□□ -2.24
VPS54YDR027C TAF14P35189 244 aa1.03□□□□□ -2.24
VPS54YDR027C PRY2P36110 329 aa1.03□□□□□ -2.24
VPS54YDR027C RTC3P38804 111 aaPredicted RBP1.03□□□□□ -2.24
VPS54YDR027C HST4P53688 370 aa1.03□□□□□ -2.24
VPS54YDR027C RHO3Q00245 231 aaKnown RBP1.03□□□□□ -2.24
VPS54YDR027C EMI1Q04406 187 aa1.03□□□□□ -2.24
VPS54YDR027C ATG38Q05789 226 aaKnown RBP1.03□□□□□ -2.24
VPS54YDR027C YOL019WQ08157 551 aa1.03□□□□□ -2.24
VPS54YDR027C TIM22Q12328 207 aa1.03□□□□□ -2.24
VPS54YDR027C RAD50P12753 1312 aa1.03□□□□□ -2.24
VPS54YDR027C VPS3P23643 1011 aa1.02□□□□□ -2.25
VPS54YDR027C DOA4P32571 926 aa1.02□□□□□ -2.25
VPS54YDR027C AGA2P32781 87 aa1.02□□□□□ -2.25
VPS54YDR027C SGE1P33335 543 aa1.02□□□□□ -2.25
VPS54YDR027C MIC12P38341 106 aa1.02□□□□□ -2.25
VPS54YDR027C SNZ3P43545 298 aa1.02□□□□□ -2.25
VPS54YDR027C CIS3P47001 227 aa1.02□□□□□ -2.25
VPS54YDR027C YJL028WP47062 111 aa1.02□□□□□ -2.25
VPS54YDR027C SNZ2P53824 298 aa1.02□□□□□ -2.25
VPS54YDR027C ATG17Q06410 417 aa1.02□□□□□ -2.25
VPS54YDR027C YPR147CQ06522 304 aaKnown RBP1.02□□□□□ -2.25
VPS54YDR027C RRP40Q08285 240 aaKnown RBP1.02□□□□□ -2.25
VPS54YDR027C YCT1Q12235 531 aa1.02□□□□□ -2.25
VPS54YDR027C RPS23AP0CX29 145 aaKnown RBP1.02□□□□□ -2.25
VPS54YDR027C RPS23BP0CX30 145 aa1.02□□□□□ -2.25
VPS54YDR027C YAK1P14680 807 aa1.02□□□□□ -2.25
VPS54YDR027C CSG2P35206 410 aa1.02□□□□□ -2.25
VPS54YDR027C GCN20P43535 752 aaKnown RBP1.02□□□□□ -2.25
VPS54YDR027C SLX9P53251 210 aaPredicted RBP1.02□□□□□ -2.25
VPS54YDR027C KRE28Q04431 385 aa1.02□□□□□ -2.25
VPS54YDR027C DCR2Q05924 578 aa1.02□□□□□ -2.25
VPS54YDR027C SPO77Q06134 477 aa1.02□□□□□ -2.25
VPS54YDR027C YLR179CQ06252 201 aaKnown RBP1.02□□□□□ -2.25
VPS54YDR027C YPR195CQ06594 109 aa1.02□□□□□ -2.25
VPS54YDR027C YPR011CQ12251 326 aa1.02□□□□□ -2.25
VPS54YDR027C PRR2Q12310 699 aa1.02□□□□□ -2.25
VPS54YDR027C STT4P37297 1900 aa1.02□□□□□ -2.25
VPS54YDR027C MRPL25P23369 157 aa1.02□□□□□ -2.25
VPS54YDR027C RAD51P25454 400 aa1.02□□□□□ -2.25
VPS54YDR027C YKT6P36015 200 aaKnown RBP1.02□□□□□ -2.25
VPS54YDR027C YKL075CP36083 450 aa1.02□□□□□ -2.25
VPS54YDR027C TRM7P38238 310 aaKnown RBP1.02□□□□□ -2.25
VPS54YDR027C RPC17P47076 161 aa1.02□□□□□ -2.25
VPS54YDR027C AAH1P53909 347 aa1.02□□□□□ -2.25
VPS54YDR027C TVP15Q03860 143 aa1.02□□□□□ -2.25
VPS54YDR027C SPG4Q04438 115 aa1.02□□□□□ -2.25
VPS54YDR027C GGA1Q06336 557 aa1.02□□□□□ -2.25
VPS54YDR027C YLR126CQ12288 251 aa1.02□□□□□ -2.25
VPS54YDR027C IES3Q12345 250 aa1.02□□□□□ -2.25
VPS54YDR027C YKL183C-AQ3E765 70 aa1.02□□□□□ -2.25
VPS54YDR027C YPL229WQ99395 206 aa1.02□□□□□ -2.25
VPS54YDR027C THP2O13539 261 aaKnown RBP1.01□□□□□ -2.25
VPS54YDR027C CDC36P06100 191 aaPredicted RBP1.01□□□□□ -2.25
VPS54YDR027C CDC33P07260 213 aaKnown RBP1.01□□□□□ -2.25
VPS54YDR027C YKL102CP34249 101 aa1.01□□□□□ -2.25
VPS54YDR027C AST1P35183 429 aa1.01□□□□□ -2.25
VPS54YDR027C VPS21P36017 210 aaKnown RBP1.01□□□□□ -2.25
VPS54YDR027C RIB1P38066 345 aa1.01□□□□□ -2.25
VPS54YDR027C MAL32P38158 584 aa1.01□□□□□ -2.25
VPS54YDR027C URA8P38627 578 aaPredicted RBP1.01□□□□□ -2.25
VPS54YDR027C YHR127WP38833 243 aaKnown RBP1.01□□□□□ -2.25
VPS54YDR027C THO1P40040 218 aaKnown RBP1.01□□□□□ -2.25
VPS54YDR027C YIL059CP40520 121 aa1.01□□□□□ -2.25
VPS54YDR027C ECO1P43605 281 aa1.01□□□□□ -2.25
VPS54YDR027C OST3P48439 350 aa1.01□□□□□ -2.25
VPS54YDR027C NIF3P53081 288 aa1.01□□□□□ -2.25
VPS54YDR027C MAL12P53341 584 aa1.01□□□□□ -2.25
VPS54YDR027C ALG9P53868 555 aaKnown RBP1.01□□□□□ -2.25
VPS54YDR027C PGA2P53903 129 aa1.01□□□□□ -2.25
VPS54YDR027C RRS1Q08746 203 aaKnown RBP1.01□□□□□ -2.25
VPS54YDR027C SNU23Q12368 194 aaPredicted RBP1.01□□□□□ -2.25
VPS54YDR027C YPL247CQ12523 523 aa1.01□□□□□ -2.25
VPS54YDR027C ADF1Q2V2Q1 113 aa1.01□□□□□ -2.25
VPS54YDR027C CDC39P25655 2108 aaKnown RBP1.01□□□□□ -2.25
VPS54YDR027C BLM10P43583 2143 aa1.01□□□□□ -2.25
VPS54YDR027C YOL163WP0CF20 169 aa1.01□□□□□ -2.25
VPS54YDR027C NHP6BP11633 99 aaKnown RBP1.01□□□□□ -2.25
VPS54YDR027C SEN2P16658 377 aa1.01□□□□□ -2.25
VPS54YDR027C CDC10P25342 322 aaKnown RBP1.01□□□□□ -2.25
VPS54YDR027C PBN1P25580 416 aa1.01□□□□□ -2.25
VPS54YDR027C PPA2P28239 310 aa1.01□□□□□ -2.25
VPS54YDR027C VMA6P32366 345 aaKnown RBP1.01□□□□□ -2.25
VPS54YDR027C SSO1P32867 290 aa1.01□□□□□ -2.25
VPS54YDR027C NTF2P33331 125 aaKnown RBP1.01□□□□□ -2.25
VPS54YDR027C KDX1P36005 433 aa1.01□□□□□ -2.25
VPS54YDR027C CBT1P36038 271 aaPredicted RBP1.01□□□□□ -2.25
VPS54YDR027C ECM13P38195 257 aa1.01□□□□□ -2.25
VPS54YDR027C FZO1P38297 855 aa1.01□□□□□ -2.25
VPS54YDR027C SUR2P38992 349 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms