RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	NHP6A	P11632	93 aa	Known RBP	3.58	□□□□□ -1.84
VMA1	YDL185W	LDH1	P38139	375 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	PCL5	P38794	229 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	IRC22	P40006	225 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	SKP1	P52286	194 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	RCR2	Q03446	210 aa	Known RBP	3.58	□□□□□ -1.84
VMA1	YDL185W	YAP6	Q03935	383 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	YDR444W	Q04093	687 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	FSH2	Q05015	223 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	RTT103	Q05543	409 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	MSW1	P04803	379 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	PRE3	P38624	215 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	YHR127W	P38833	243 aa	Known RBP	3.58	□□□□□ -1.84
VMA1	YDL185W	CTF19	Q02732	369 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	INP1	Q03694	420 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	CCE1	Q03702	353 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	MTQ2	Q03920	221 aa	Predicted RBP	3.58	□□□□□ -1.84
VMA1	YDL185W	HSP33	Q08914	237 aa	Known RBP	3.58	□□□□□ -1.84
VMA1	YDL185W	YDL157C	Q12082	118 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	ERV2	Q12284	196 aa		3.58	□□□□□ -1.84
VMA1	YDL185W	MES1	P00958	751 aa	Known RBP	3.57	□□□□□ -1.84
VMA1	YDL185W	POR1	P04840	283 aa	Known RBP	3.57	□□□□□ -1.84
VMA1	YDL185W	YHL026C	P38740	315 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	JHD1	P40034	492 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	BUD8	P41698	603 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	EAF6	P47128	113 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	YGL235W	P53071	178 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	CDH1	P53197	566 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	DIG2	Q03373	323 aa	Known RBP	3.57	□□□□□ -1.84
VMA1	YDL185W	RCE1	Q03530	315 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	CSM4	Q08955	156 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	RPB5	P20434	215 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	YKL069W	P36088	180 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	PRY2	P36110	329 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	CUE1	P38428	203 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	GGC1	P38988	300 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	FET4	P40988	552 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	BXI1	P48558	297 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	EMC4	P53073	190 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	YNL134C	P53912	376 aa	Known RBP	3.57	□□□□□ -1.84
VMA1	YDL185W	SAM50	P53969	484 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	YML018C	Q03730	393 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	YOR387C	Q08910	206 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	SUL2	Q12325	893 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	POX1	P13711	748 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	YCR025C	P25352	136 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	YKL102C	P34249	101 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	UMP1	P38293	148 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	ECM34	P38728	170 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	MNL1	P38888	796 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	PEX7	P39108	375 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	GIP2	P40036	548 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	YFR020W	P43600	232 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	SFH5	P47008	294 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	STP4	Q07351	490 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	MCH1	Q07376	486 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	ATG10	Q07879	167 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	FRE7	Q12333	620 aa		3.57	□□□□□ -1.84
VMA1	YDL185W	DAL80	P26343	269 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	ZIM17	P42844	174 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	SSU72	P53538	206 aa	Predicted RBP	3.56	□□□□□ -1.84
VMA1	YDL185W	HED1	Q03937	162 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	YLR030W	Q07967	263 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	OPI10	Q08202	246 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	YPL257W	Q08974	193 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	YCT1	Q12235	531 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	RPS21B	Q3E754	87 aa	Known RBP	3.56	□□□□□ -1.84
VMA1	YDL185W	VMA3	P25515	160 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	TCA17	P32613	152 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	PFS1	P38872	237 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	TRM9	P49957	279 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	THG1	P53215	237 aa	Known RBP	3.56	□□□□□ -1.84
VMA1	YDL185W	PAU4	P53427	120 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	PIR1	Q03178	341 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	YDR248C	Q03786	193 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	YMR082C	Q04276	118 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	YML096W	Q04489	525 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	HRI1	Q05905	244 aa	Known RBP	3.56	□□□□□ -1.84
VMA1	YDL185W	YDL211C	Q12121	372 aa		3.56	□□□□□ -1.84
VMA1	YDL185W	MBF1	O14467	151 aa	Known RBP	3.55	□□□□□ -1.84
VMA1	YDL185W	CBS1	P14066	229 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	CWP1	P28319	239 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	KKQ8	P36004	724 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	IML3	P38265	245 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	YBR292C	P38357	123 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	RPP1	P38786	293 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	YPT35	P38815	214 aa	Known RBP	3.55	□□□□□ -1.84
VMA1	YDL185W	HSP10	P38910	106 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	BTT1	P40314	149 aa	Predicted RBP	3.55	□□□□□ -1.84
VMA1	YDL185W	RIB4	P50861	169 aa	Predicted RBP	3.55	□□□□□ -1.84
VMA1	YDL185W	PDR16	P53860	351 aa	Known RBP	3.55	□□□□□ -1.84
VMA1	YDL185W	RNH201	P53942	307 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	CAB5	Q03941	241 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	STP3	Q05937	343 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	SNT309	Q06091	175 aa	Predicted RBP	3.55	□□□□□ -1.84
VMA1	YDL185W	TPT1	Q12272	230 aa	Known RBP	3.55	□□□□□ -1.84
VMA1	YDL185W	COA2	Q3E823	68 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	Q0144	Q9ZZW2	109 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	SAL1	D6W196	494 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	QCR2	P07257	368 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms