RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C HMLALPHA1P0CY07 175 aa2.61□□□□□ -1.99
RPN4YDL020C YKR032WP36127 104 aa2.61□□□□□ -1.99
RPN4YDL020C YER085CP40058 173 aa2.61□□□□□ -1.99
RPN4YDL020C YER188WP40103 239 aa2.61□□□□□ -1.99
RPN4YDL020C YJR141WP47172 347 aaPredicted RBP2.61□□□□□ -1.99
RPN4YDL020C SYC1Q08553 188 aaPredicted RBP2.61□□□□□ -1.99
RPN4YDL020C CLP1Q08685 445 aaPredicted RBP2.61□□□□□ -1.99
RPN4YDL020C YOR268CQ08734 132 aa2.61□□□□□ -1.99
RPN4YDL020C YKL068W-AQ3E826 78 aa2.61□□□□□ -1.99
RPN4YDL020C NCB2Q92317 146 aa2.61□□□□□ -1.99
RPN4YDL020C FKS3Q04952 1785 aa2.61□□□□□ -1.99
RPN4YDL020C DRE2P36152 348 aa2.61□□□□□ -1.99
RPN4YDL020C YHB1P39676 399 aaKnown RBP2.61□□□□□ -1.99
RPN4YDL020C YMR114CQ04471 368 aaKnown RBP2.61□□□□□ -1.99
RPN4YDL020C MATALPHA2P0CY08 210 aa2.6□□□□□ -1.99
RPN4YDL020C HMLALPHA2P0CY09 210 aa2.6□□□□□ -1.99
RPN4YDL020C RPO26P20435 155 aa2.6□□□□□ -1.99
RPN4YDL020C RPS5P26783 225 aaKnown RBP2.6□□□□□ -1.99
RPN4YDL020C YHR127WP38833 243 aaKnown RBP2.6□□□□□ -1.99
RPN4YDL020C GON7P46984 123 aa2.6□□□□□ -1.99
RPN4YDL020C SSU72P53538 206 aaPredicted RBP2.6□□□□□ -1.99
RPN4YDL020C YLR179CQ06252 201 aaKnown RBP2.6□□□□□ -1.99
RPN4YDL020C YOR186WQ08560 144 aa2.6□□□□□ -1.99
RPN4YDL020C EMP46Q12396 444 aa2.6□□□□□ -1.99
RPN4YDL020C SWI1P09547 1314 aa2.59□□□□□ -1.99
RPN4YDL020C RPL22AP05749 121 aaKnown RBP2.59□□□□□ -1.99
RPN4YDL020C SEC22P22214 214 aa2.59□□□□□ -1.99
RPN4YDL020C MRPL25P23369 157 aa2.59□□□□□ -1.99
RPN4YDL020C YKT6P36015 200 aaKnown RBP2.59□□□□□ -1.99
RPN4YDL020C YKL075CP36083 450 aa2.59□□□□□ -1.99
RPN4YDL020C DIA1P54005 336 aa2.59□□□□□ -1.99
RPN4YDL020C RNH1Q04740 348 aa2.59□□□□□ -1.99
RPN4YDL020C PHO13P19881 312 aa2.58□□□□□ -2
RPN4YDL020C YCR102CP25608 368 aa2.58□□□□□ -2
RPN4YDL020C YER189WP40104 122 aa2.58□□□□□ -2
RPN4YDL020C NOP13P53883 403 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
RPN4YDL020C SAC3P46674 1301 aa2.58□□□□□ -2
RPN4YDL020C DPM1P14020 267 aaKnown RBP2.57□□□□□ -2
RPN4YDL020C TIM11P81449 96 aaPredicted RBP2.57□□□□□ -2
RPN4YDL020C GRH1Q04410 372 aaKnown RBP2.57□□□□□ -2
RPN4YDL020C SEI1Q06058 285 aa2.57□□□□□ -2
RPN4YDL020C SPO77Q06134 477 aa2.57□□□□□ -2
RPN4YDL020C YLR126CQ12288 251 aa2.57□□□□□ -2
RPN4YDL020C UTP10P42945 1769 aaKnown RBP2.57□□□□□ -2
RPN4YDL020C RSF2P46974 1380 aa2.57□□□□□ -2
RPN4YDL020C SGA1P08019 549 aa2.57□□□□□ -2
RPN4YDL020C BMH2P34730 273 aaKnown RBP2.57□□□□□ -2
RPN4YDL020C YNL046WP53956 172 aa2.57□□□□□ -2
RPN4YDL020C MIX17Q03667 156 aa2.57□□□□□ -2
RPN4YDL020C UTR5P32630 166 aa2.56□□□□□ -2
RPN4YDL020C RCN1P36054 211 aa2.56□□□□□ -2
RPN4YDL020C CUE1P38428 203 aa2.56□□□□□ -2
RPN4YDL020C YGP1P38616 354 aaKnown RBP2.56□□□□□ -2
RPN4YDL020C RIO2P40160 425 aaKnown RBP2.56□□□□□ -2
RPN4YDL020C RPC17P47076 161 aa2.56□□□□□ -2
RPN4YDL020C RSM10Q03201 203 aa2.56□□□□□ -2
RPN4YDL020C YPL225WQ08971 146 aaKnown RBP2.56□□□□□ -2
RPN4YDL020C RUD3Q12234 484 aaKnown RBP2.56□□□□□ -2
RPN4YDL020C YLR462WO13556 202 aa2.55□□□□□ -2
RPN4YDL020C RHO1P06780 209 aaKnown RBP2.55□□□□□ -2
RPN4YDL020C VPS21P36017 210 aaKnown RBP2.55□□□□□ -2
RPN4YDL020C YEL075CP39972 122 aa2.55□□□□□ -2
RPN4YDL020C YMR144WP40214 342 aaKnown RBP2.55□□□□□ -2
RPN4YDL020C CAB4P53332 305 aa2.55□□□□□ -2
RPN4YDL020C RDS3Q06835 107 aaPredicted RBP2.55□□□□□ -2
RPN4YDL020C BBP1Q12365 385 aa2.55□□□□□ -2
RPN4YDL020C RPL26AP05743 127 aaKnown RBP2.54□□□□□ -2
RPN4YDL020C MSA2P36157 363 aa2.54□□□□□ -2
RPN4YDL020C MED6P38782 295 aa2.54□□□□□ -2
RPN4YDL020C COG3P40094 801 aa2.54□□□□□ -2
RPN4YDL020C TIF34P40217 347 aaKnown RBP2.54□□□□□ -2
RPN4YDL020C OTU1P43558 301 aa2.54□□□□□ -2
RPN4YDL020C OST2P46964 130 aa2.54□□□□□ -2
RPN4YDL020C YJL016WP47072 561 aa2.54□□□□□ -2
RPN4YDL020C RPL26BP53221 127 aaKnown RBP2.54□□□□□ -2
RPN4YDL020C ERD2P18414 219 aa2.53□□□□□ -2
RPN4YDL020C RPL24BP24000 155 aaKnown RBP2.53□□□□□ -2
RPN4YDL020C COS8P38723 381 aa2.53□□□□□ -2
RPN4YDL020C YGL159WP53110 370 aa2.53□□□□□ -2
RPN4YDL020C PEX12Q04370 399 aa2.53□□□□□ -2
RPN4YDL020C FAR8Q05040 523 aa2.53□□□□□ -2
RPN4YDL020C YLR030WQ07967 263 aa2.53□□□□□ -2
RPN4YDL020C SAS5Q99314 248 aa2.53□□□□□ -2
RPN4YDL020C CDC8P00572 216 aa2.53□□□□□ -2.01
RPN4YDL020C CDC10P25342 322 aaKnown RBP2.53□□□□□ -2.01
RPN4YDL020C PPA2P28239 310 aa2.53□□□□□ -2.01
RPN4YDL020C VMA6P32366 345 aaKnown RBP2.53□□□□□ -2.01
RPN4YDL020C ERG24P32462 438 aaKnown RBP2.53□□□□□ -2.01
RPN4YDL020C YET1P35723 206 aa2.53□□□□□ -2.01
RPN4YDL020C GCN20P43535 752 aaKnown RBP2.53□□□□□ -2.01
RPN4YDL020C YJR146WP47174 117 aa2.53□□□□□ -2.01
RPN4YDL020C TRM9P49957 279 aa2.53□□□□□ -2.01
RPN4YDL020C DCR2Q05924 578 aa2.53□□□□□ -2.01
RPN4YDL020C YPR172WQ06608 200 aa2.53□□□□□ -2.01
RPN4YDL020C YPL229WQ99395 206 aa2.53□□□□□ -2.01
RPN4YDL020C FAS2P19097 1887 aaKnown RBP2.52□□□□□ -2.01
RPN4YDL020C THP2O13539 261 aaKnown RBP2.52□□□□□ -2.01
RPN4YDL020C IPP1P00817 287 aaKnown RBP2.52□□□□□ -2.01
RPN4YDL020C SNA3P14359 133 aa2.52□□□□□ -2.01
RPN4YDL020C SEC14P24280 304 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 86.2 ms