RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B SMB1P40018 196 aaKnown RBP-0.16□□□□□ -2.44
HTL1YCR020W-B YNL046WP53956 172 aa-0.16□□□□□ -2.44
HTL1YCR020W-B SSQ1Q05931 657 aaPredicted RBP-0.16□□□□□ -2.44
HTL1YCR020W-B MSH5Q12175 901 aa-0.16□□□□□ -2.44
HTL1YCR020W-B SSK22P25390 1331 aaPredicted RBP-0.16□□□□□ -2.44
HTL1YCR020W-B MRPS28P21771 286 aa-0.17□□□□□ -2.44
HTL1YCR020W-B BLI1P35727 113 aa-0.17□□□□□ -2.44
HTL1YCR020W-B CAT5P41735 233 aa-0.17□□□□□ -2.44
HTL1YCR020W-B POP3P53833 195 aaPredicted RBP-0.17□□□□□ -2.44
HTL1YCR020W-B NOP13P53883 403 aaKnown RBP RIP-Chip data-0.17□□□□□ -2.44not detected
HTL1YCR020W-B ALG11P53954 548 aaKnown RBP-0.17□□□□□ -2.44
HTL1YCR020W-B RCE1Q03530 315 aa-0.17□□□□□ -2.44
HTL1YCR020W-B GAS3Q03655 524 aa-0.17□□□□□ -2.44
HTL1YCR020W-B TRM12Q04235 462 aa-0.17□□□□□ -2.44
HTL1YCR020W-B MRP1P10662 321 aaKnown RBP-0.18□□□□□ -2.44
HTL1YCR020W-B VPS21P36017 210 aaKnown RBP-0.18□□□□□ -2.44
HTL1YCR020W-B YBR096WP38256 230 aa-0.18□□□□□ -2.44
HTL1YCR020W-B PRS2P38620 318 aaKnown RBP-0.18□□□□□ -2.44
HTL1YCR020W-B SIP3P38717 1229 aa-0.18□□□□□ -2.44
HTL1YCR020W-B YFL065CP43539 102 aa-0.18□□□□□ -2.44
HTL1YCR020W-B HAM1P47119 197 aaKnown RBP-0.18□□□□□ -2.44
HTL1YCR020W-B KNH1P50112 268 aa-0.18□□□□□ -2.44
HTL1YCR020W-B ARO8P53090 500 aaKnown RBP-0.18□□□□□ -2.44
HTL1YCR020W-B CUS2P53830 285 aaPredicted RBP-0.18□□□□□ -2.44
HTL1YCR020W-B YDR209CQ03480 137 aa-0.18□□□□□ -2.44
HTL1YCR020W-B YLR413WQ06689 675 aa-0.18□□□□□ -2.44
HTL1YCR020W-B STP22P25604 385 aa-0.19□□□□□ -2.44
HTL1YCR020W-B EDC3P39998 551 aaKnown RBP-0.19□□□□□ -2.44
HTL1YCR020W-B DOC1P53068 250 aa-0.19□□□□□ -2.44
HTL1YCR020W-B RHO3Q00245 231 aaKnown RBP-0.19□□□□□ -2.44
HTL1YCR020W-B YOR029WQ12243 111 aa-0.19□□□□□ -2.44
HTL1YCR020W-B PSF1Q12488 208 aa-0.19□□□□□ -2.44
HTL1YCR020W-B TUS1Q06412 1307 aa-0.19□□□□□ -2.44
HTL1YCR020W-B YPR170W-BP0C5R9 85 aa-0.2□□□□□ -2.44
HTL1YCR020W-B RPS5P26783 225 aaKnown RBP-0.2□□□□□ -2.44
HTL1YCR020W-B HOM6P31116 359 aaKnown RBP-0.2□□□□□ -2.44
HTL1YCR020W-B ILM1P47155 203 aa-0.2□□□□□ -2.44
HTL1YCR020W-B KAP114P53067 1004 aa-0.2□□□□□ -2.44
HTL1YCR020W-B YML096WQ04489 525 aa-0.2□□□□□ -2.44
HTL1YCR020W-B LCL2Q08045 131 aa-0.2□□□□□ -2.44
HTL1YCR020W-B YOL160WQ08321 113 aa-0.2□□□□□ -2.44
HTL1YCR020W-B SIR2P06700 562 aa-0.21□□□□□ -2.44
HTL1YCR020W-B TPM1P17536 199 aaKnown RBP-0.21□□□□□ -2.44
HTL1YCR020W-B YBR209WP38311 105 aa-0.21□□□□□ -2.44
HTL1YCR020W-B FLX1P40464 311 aa-0.21□□□□□ -2.44
HTL1YCR020W-B YAE1P47118 141 aaPredicted RBP-0.21□□□□□ -2.44
HTL1YCR020W-B EAF6P47128 113 aa-0.21□□□□□ -2.44
HTL1YCR020W-B YHR127WP38833 243 aaKnown RBP-0.22□□□□□ -2.44
HTL1YCR020W-B RSM25P40496 264 aa-0.22□□□□□ -2.44
HTL1YCR020W-B USE1P53146 245 aa-0.22□□□□□ -2.44
HTL1YCR020W-B ERD2P18414 219 aa-0.23□□□□□ -2.45
HTL1YCR020W-B RIB1P38066 345 aa-0.23□□□□□ -2.45
HTL1YCR020W-B YHL042WP38729 150 aa-0.23□□□□□ -2.45
HTL1YCR020W-B GLG2P47011 380 aa-0.23□□□□□ -2.45
HTL1YCR020W-B ABF2Q02486 183 aa-0.23□□□□□ -2.45
HTL1YCR020W-B CWC27Q02770 301 aa-0.23□□□□□ -2.45
HTL1YCR020W-B DIG2Q03373 323 aaKnown RBP-0.23□□□□□ -2.45
HTL1YCR020W-B YHR007C-AQ07074 71 aa-0.23□□□□□ -2.45
HTL1YCR020W-B SNU23Q12368 194 aaPredicted RBP-0.23□□□□□ -2.45
HTL1YCR020W-B YIL002W-AQ3E7Z5 69 aa-0.23□□□□□ -2.45
HTL1YCR020W-B OPY1P38271 328 aa-0.24□□□□□ -2.45
HTL1YCR020W-B UMP1P38293 148 aa-0.24□□□□□ -2.45
HTL1YCR020W-B YMR144WP40214 342 aaKnown RBP-0.24□□□□□ -2.45
HTL1YCR020W-B PRE6P40303 254 aaKnown RBP-0.24□□□□□ -2.45
HTL1YCR020W-B SNZ1Q03148 297 aa-0.24□□□□□ -2.45
HTL1YCR020W-B YMD8Q03697 442 aa-0.24□□□□□ -2.45
HTL1YCR020W-B SEI1Q06058 285 aa-0.24□□□□□ -2.45
HTL1YCR020W-B YPL229WQ99395 206 aa-0.24□□□□□ -2.45
HTL1YCR020W-B REP2P03872 296 aa-0.25□□□□□ -2.45
HTL1YCR020W-B DAL82P21705 255 aa-0.25□□□□□ -2.45
HTL1YCR020W-B URA8P38627 578 aaPredicted RBP-0.25□□□□□ -2.45
HTL1YCR020W-B BFR1P38934 470 aaKnown RBP RIP-Chip data-0.25□□□□□ -2.45not detected
HTL1YCR020W-B ADH6Q04894 360 aaKnown RBP-0.25□□□□□ -2.45
HTL1YCR020W-B COX2P00410 251 aa-0.26□□□□□ -2.45
HTL1YCR020W-B YCL042WP25572 119 aa-0.26□□□□□ -2.45
HTL1YCR020W-B UGX2P32772 223 aa-0.26□□□□□ -2.45
HTL1YCR020W-B SNC2P33328 115 aa-0.26□□□□□ -2.45
HTL1YCR020W-B YEA4P40004 342 aa-0.26□□□□□ -2.45
HTL1YCR020W-B YNL010WP53981 241 aaKnown RBP-0.26□□□□□ -2.45
HTL1YCR020W-B SED1Q01589 338 aa-0.26□□□□□ -2.45
HTL1YCR020W-B COX20Q04935 205 aa-0.26□□□□□ -2.45
HTL1YCR020W-B FMP49A0A023PZB3 126 aa-0.27□□□□□ -2.45
HTL1YCR020W-B YLR236CA0A023PZG4 107 aa-0.27□□□□□ -2.45
HTL1YCR020W-B YLR156WP0CE96 114 aa-0.27□□□□□ -2.45
HTL1YCR020W-B YLR159WP0CE97 114 aa-0.27□□□□□ -2.45
HTL1YCR020W-B YLR161WP0CE98 114 aa-0.27□□□□□ -2.45
HTL1YCR020W-B ATG22P25568 528 aa-0.27□□□□□ -2.45
HTL1YCR020W-B MRPL17P36528 281 aa-0.27□□□□□ -2.45
HTL1YCR020W-B PEX17P40155 199 aa-0.27□□□□□ -2.45
HTL1YCR020W-B HYR1P40581 163 aaKnown RBP-0.27□□□□□ -2.45
HTL1YCR020W-B YNL247WP53852 767 aaKnown RBP-0.27□□□□□ -2.45
HTL1YCR020W-B YDR248CQ03786 193 aa-0.27□□□□□ -2.45
HTL1YCR020W-B RAD28Q12021 506 aa-0.27□□□□□ -2.45
HTL1YCR020W-B YLR126CQ12288 251 aa-0.27□□□□□ -2.45
HTL1YCR020W-B DBP3P20447 523 aaKnown RBP-0.28□□□□□ -2.45
HTL1YCR020W-B DBF2P22204 572 aa-0.28□□□□□ -2.45
HTL1YCR020W-B MRPL28P36527 147 aa-0.28□□□□□ -2.45
HTL1YCR020W-B IRC22P40006 225 aa-0.28□□□□□ -2.45
HTL1YCR020W-B EMC2P47133 292 aaKnown RBP-0.28□□□□□ -2.45
HTL1YCR020W-B EGD1Q02642 157 aaKnown RBP-0.28□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms