RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C COG3P40094 801 aa1.99□□□□□ -2.09
SRD1YCR018C TIF34P40217 347 aaKnown RBP1.99□□□□□ -2.09
SRD1YCR018C FIS1P40515 155 aa1.99□□□□□ -2.09
SRD1YCR018C ARC15P40518 154 aaRIP-Chip data1.99□□□□□ -2.09not detected
SRD1YCR018C CAT5P41735 233 aa1.99□□□□□ -2.09
SRD1YCR018C YRB1P41920 201 aaKnown RBP1.99□□□□□ -2.09
SRD1YCR018C HAM1P47119 197 aaKnown RBP1.99□□□□□ -2.09
SRD1YCR018C MIC26P50087 233 aa1.99□□□□□ -2.09
SRD1YCR018C GTR2P53290 341 aa1.99□□□□□ -2.09
SRD1YCR018C BNA7Q04066 261 aa1.99□□□□□ -2.09
SRD1YCR018C YML096WQ04489 525 aa1.99□□□□□ -2.09
SRD1YCR018C SSQ1Q05931 657 aaPredicted RBP1.99□□□□□ -2.09
SRD1YCR018C SUE1Q06524 206 aa1.99□□□□□ -2.09
SRD1YCR018C GIS3Q12418 502 aa1.99□□□□□ -2.09
SRD1YCR018C VTH1P40438 1549 aa1.99□□□□□ -2.09
SRD1YCR018C VTH2P40890 1549 aa1.99□□□□□ -2.09
SRD1YCR018C VPS15P22219 1454 aa1.99□□□□□ -2.09
SRD1YCR018C TY2B-BQ12491 1770 aa1.98□□□□□ -2.09
SRD1YCR018C TY1B-DR3Q99231 1755 aa1.98□□□□□ -2.09
SRD1YCR018C RPL26AP05743 127 aaKnown RBP1.98□□□□□ -2.09
SRD1YCR018C ARG80P07249 177 aa1.98□□□□□ -2.09
SRD1YCR018C URA6P15700 204 aa1.98□□□□□ -2.09
SRD1YCR018C RPL26BP53221 127 aaKnown RBP1.98□□□□□ -2.09
SRD1YCR018C YML108WQ03759 105 aa1.98□□□□□ -2.09
SRD1YCR018C MSA1Q08471 629 aa1.98□□□□□ -2.09
SRD1YCR018C YOR020W-AQ3E824 90 aa1.98□□□□□ -2.09
SRD1YCR018C NCB2Q92317 146 aa1.98□□□□□ -2.09
SRD1YCR018C GEA2P39993 1459 aaKnown RBP1.98□□□□□ -2.09
SRD1YCR018C MMS1Q06211 1407 aa1.98□□□□□ -2.09
SRD1YCR018C TY1B-HO13535 1793 aa1.98□□□□□ -2.09
SRD1YCR018C TY1B-DR5P0C2I2 1755 aa1.98□□□□□ -2.09
SRD1YCR018C TY1B-DR6P0C2I3 1755 aa1.98□□□□□ -2.09
SRD1YCR018C TY1B-LR2P0C2I5 1755 aa1.98□□□□□ -2.09
SRD1YCR018C TY1B-LR3P0C2I6 1755 aaKnown RBP1.98□□□□□ -2.09
SRD1YCR018C TY1B-PR1P0C2I9 1755 aaKnown RBP1.98□□□□□ -2.09
SRD1YCR018C TY1B-PR2P0C2J0 1756 aa1.98□□□□□ -2.09
SRD1YCR018C TY1B-PR3P0C2J1 1755 aaKnown RBP1.98□□□□□ -2.09
SRD1YCR018C TY1B-JR1P47098 1755 aa1.98□□□□□ -2.09
SRD1YCR018C TY1B-ML2Q03434 1755 aaKnown RBP1.98□□□□□ -2.09
SRD1YCR018C TY1B-ER1Q03612 1755 aa1.98□□□□□ -2.09
SRD1YCR018C TY1B-ML1Q04711 1755 aaKnown RBP1.98□□□□□ -2.09
SRD1YCR018C TY1B-GR2Q12269 1755 aa1.98□□□□□ -2.09
SRD1YCR018C TY1B-OLQ12273 1755 aa1.98□□□□□ -2.09
SRD1YCR018C TY1B-PLQ12414 1755 aaKnown RBP1.98□□□□□ -2.09
SRD1YCR018C MYO4P32492 1471 aa1.97□□□□□ -2.09
SRD1YCR018C COX5AP00424 153 aa1.97□□□□□ -2.09
SRD1YCR018C SPT3P06844 337 aa1.97□□□□□ -2.09
SRD1YCR018C VMA11P32842 164 aa1.97□□□□□ -2.09
SRD1YCR018C PRP18P33411 251 aaPredicted RBP1.97□□□□□ -2.09
SRD1YCR018C YKT6P36015 200 aaKnown RBP1.97□□□□□ -2.09
SRD1YCR018C CBT1P36038 271 aaPredicted RBP1.97□□□□□ -2.09
SRD1YCR018C YHL026CP38740 315 aa1.97□□□□□ -2.09
SRD1YCR018C MED6P38782 295 aa1.97□□□□□ -2.09
SRD1YCR018C YHR125WP38831 101 aa1.97□□□□□ -2.09
SRD1YCR018C YAR068WP39564 161 aa1.97□□□□□ -2.09
SRD1YCR018C ERG28P40030 148 aa1.97□□□□□ -2.09
SRD1YCR018C YJR149WP47177 404 aa1.97□□□□□ -2.09
SRD1YCR018C RAD17P48581 401 aa1.97□□□□□ -2.09
SRD1YCR018C ALG13P53178 202 aa1.97□□□□□ -2.09
SRD1YCR018C CGR1P53188 120 aa1.97□□□□□ -2.09
SRD1YCR018C YGR026WP53217 278 aa1.97□□□□□ -2.09
SRD1YCR018C SLM2P53955 656 aa1.97□□□□□ -2.09
SRD1YCR018C RSM10Q03201 203 aa1.97□□□□□ -2.09
SRD1YCR018C YMR279CQ03263 540 aa1.97□□□□□ -2.09
SRD1YCR018C YMD8Q03697 442 aa1.97□□□□□ -2.09
SRD1YCR018C TPO4Q12256 659 aa1.97□□□□□ -2.09
SRD1YCR018C SNT2P53127 1403 aa1.97□□□□□ -2.09
SRD1YCR018C SNQ2P32568 1501 aaKnown RBP1.96□□□□□ -2.09
SRD1YCR018C BNI1P41832 1953 aa1.96□□□□□ -2.1
SRD1YCR018C YHR032W-AP0C5N6 59 aa1.96□□□□□ -2.1
SRD1YCR018C FCY2P17064 533 aa1.96□□□□□ -2.1
SRD1YCR018C CCA1P21269 546 aa1.96□□□□□ -2.1
SRD1YCR018C CLB6P32943 380 aa1.96□□□□□ -2.1
SRD1YCR018C YPT52P36018 234 aaKnown RBP1.96□□□□□ -2.1
SRD1YCR018C URA8P38627 578 aaPredicted RBP1.96□□□□□ -2.1
SRD1YCR018C RTC3P38804 111 aaPredicted RBP1.96□□□□□ -2.1
SRD1YCR018C YNL194CP40169 301 aa1.96□□□□□ -2.1
SRD1YCR018C NUP57P48837 541 aa1.96□□□□□ -2.1
SRD1YCR018C ATG39Q06159 398 aa1.96□□□□□ -2.1
SRD1YCR018C JLP1Q12358 412 aa1.96□□□□□ -2.1
SRD1YCR018C DCN1Q12395 269 aa1.96□□□□□ -2.1
SRD1YCR018C MHT1Q12525 324 aa1.96□□□□□ -2.1
SRD1YCR018C YKL183C-AQ3E765 70 aa1.96□□□□□ -2.1
SRD1YCR018C Q0255P03881 472 aa1.95□□□□□ -2.1
SRD1YCR018C CDC36P06100 191 aaPredicted RBP1.95□□□□□ -2.1
SRD1YCR018C CDC33P07260 213 aaKnown RBP1.95□□□□□ -2.1
SRD1YCR018C SCM4P32564 187 aa1.95□□□□□ -2.1
SRD1YCR018C PEX17P40155 199 aa1.95□□□□□ -2.1
SRD1YCR018C MRPL49P40858 161 aaPredicted RBP1.95□□□□□ -2.1
SRD1YCR018C YJR146WP47174 117 aa1.95□□□□□ -2.1
SRD1YCR018C ERV29P53337 310 aa1.95□□□□□ -2.1
SRD1YCR018C ABF2Q02486 183 aa1.95□□□□□ -2.1
SRD1YCR018C NIP7Q08962 181 aaKnown RBP1.95□□□□□ -2.1
SRD1YCR018C LSO2Q3E772 92 aaKnown RBP1.95□□□□□ -2.1
SRD1YCR018C NTE1Q04958 1679 aa1.95□□□□□ -2.1
SRD1YCR018C YRF1-1P0CX20 1796 aa1.95□□□□□ -2.1
SRD1YCR018C YRF1-5P0CX21 1796 aa1.95□□□□□ -2.1
SRD1YCR018C YRF1-8P0CX22 1796 aa1.95□□□□□ -2.1
SRD1YCR018C IDH1P28834 360 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SRD1YCR018C YBR063CP38083 404 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 101.7 ms