RNA–Protein interactions for RNA: YBR029C

CDS1, Transcript of Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase), yeast

Gene CDS1, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDS1	YBR029C	YRB1	P41920	201 aa	Known RBP	4.12	□□□□□ -1.75
CDS1	YBR029C	BUD13	P46947	266 aa	Predicted RBP	4.12	□□□□□ -1.75
CDS1	YBR029C	YDR222W	Q04925	415 aa		4.12	□□□□□ -1.75
CDS1	YBR029C	ADF1	Q2V2Q1	113 aa		4.12	□□□□□ -1.75
CDS1	YBR029C	NCB2	Q92317	146 aa		4.12	□□□□□ -1.75
CDS1	YBR029C	PDR18	P53756	1333 aa		4.11	□□□□□ -1.75
CDS1	YBR029C	FAS2	P19097	1887 aa	Known RBP	4.11	□□□□□ -1.75
CDS1	YBR029C	DPB2	P24482	689 aa	Predicted RBP	4.11	□□□□□ -1.75
CDS1	YBR029C	FMT1	P32785	401 aa		4.11	□□□□□ -1.75
CDS1	YBR029C	SFC1	P33303	322 aa		4.11	□□□□□ -1.75
CDS1	YBR029C	RIB1	P38066	345 aa		4.11	□□□□□ -1.75
CDS1	YBR029C	CPR7	P47103	393 aa		4.11	□□□□□ -1.75
CDS1	YBR029C	YPR011C	Q12251	326 aa		4.11	□□□□□ -1.75
CDS1	YBR029C	YBR121C-A	P0C5L4	52 aa		4.1	□□□□□ -1.75
CDS1	YBR029C	NOP1	P15646	327 aa	Known RBP	4.1	□□□□□ -1.75
CDS1	YBR029C	GDH2	P33327	1092 aa	Known RBP	4.1	□□□□□ -1.75
CDS1	YBR029C	SIP3	P38717	1229 aa		4.1	□□□□□ -1.75
CDS1	YBR029C	SEI1	Q06058	285 aa		4.1	□□□□□ -1.75
CDS1	YBR029C	MRX4	Q12467	430 aa		4.1	□□□□□ -1.75
CDS1	YBR029C	SEY1	Q99287	776 aa		4.1	□□□□□ -1.75
CDS1	YBR029C	CCH1	P50077	2039 aa		4.09	□□□□□ -1.75
CDS1	YBR029C	PRP18	P33411	251 aa	Predicted RBP	4.09	□□□□□ -1.75
CDS1	YBR029C	SLX1	P38324	304 aa		4.09	□□□□□ -1.75
CDS1	YBR029C	ECM14	P38836	430 aa		4.09	□□□□□ -1.75
CDS1	YBR029C	RSM25	P40496	264 aa		4.09	□□□□□ -1.75
CDS1	YBR029C	OST3	P48439	350 aa		4.09	□□□□□ -1.75
CDS1	YBR029C	CDC123	Q05791	360 aa		4.09	□□□□□ -1.75
CDS1	YBR029C	YOR186W	Q08560	144 aa		4.09	□□□□□ -1.75
CDS1	YBR029C	RNP1	P32385	249 aa		4.08	□□□□□ -1.76
CDS1	YBR029C	PRX1	P34227	261 aa	Known RBP	4.08	□□□□□ -1.76
CDS1	YBR029C	CBT1	P36038	271 aa	Predicted RBP	4.08	□□□□□ -1.76
CDS1	YBR029C	RAD17	P48581	401 aa		4.08	□□□□□ -1.76
CDS1	YBR029C	TRM9	P49957	279 aa		4.08	□□□□□ -1.76
CDS1	YBR029C	EMI1	Q04406	187 aa		4.08	□□□□□ -1.76
CDS1	YBR029C	HEM25	Q07534	307 aa		4.08	□□□□□ -1.76
CDS1	YBR029C	TIM22	Q12328	207 aa		4.08	□□□□□ -1.76
CDS1	YBR029C	ZWF1	P11412	505 aa	Known RBP	4.07	□□□□□ -1.76
CDS1	YBR029C	RTC3	P38804	111 aa	Predicted RBP	4.07	□□□□□ -1.76
CDS1	YBR029C	ERG28	P40030	148 aa		4.07	□□□□□ -1.76
CDS1	YBR029C	NSA1	P53136	463 aa	Predicted RBP	4.07	□□□□□ -1.76
CDS1	YBR029C	YDL012C	Q12489	107 aa		4.07	□□□□□ -1.76
CDS1	YBR029C	BCY1	P07278	416 aa	Known RBP	4.06	□□□□□ -1.76
CDS1	YBR029C	MIC26	P50087	233 aa		4.06	□□□□□ -1.76
CDS1	YBR029C	YDR114C	Q04597	100 aa		4.06	□□□□□ -1.76
CDS1	YBR029C	YPR195C	Q06594	109 aa		4.06	□□□□□ -1.76
CDS1	YBR029C	DDP1	Q99321	188 aa	Known RBP	4.06	□□□□□ -1.76
CDS1	YBR029C	SAC3	P46674	1301 aa		4.06	□□□□□ -1.76
CDS1	YBR029C	FIG2	P25653	1609 aa		4.05	□□□□□ -1.76
CDS1	YBR029C	RPL28	P02406	149 aa	Known RBP	4.05	□□□□□ -1.76
CDS1	YBR029C	CDC33	P07260	213 aa	Known RBP	4.05	□□□□□ -1.76
CDS1	YBR029C	RPS23A	P0CX29	145 aa	Known RBP	4.05	□□□□□ -1.76
CDS1	YBR029C	RPS23B	P0CX30	145 aa		4.05	□□□□□ -1.76
CDS1	YBR029C	NTF2	P33331	125 aa	Known RBP	4.05	□□□□□ -1.76
CDS1	YBR029C	PRY2	P36110	329 aa		4.05	□□□□□ -1.76
CDS1	YBR029C	URA8	P38627	578 aa	Predicted RBP	4.05	□□□□□ -1.76
CDS1	YBR029C	YER189W	P40104	122 aa		4.05	□□□□□ -1.76
CDS1	YBR029C	MCM22	P47167	239 aa		4.05	□□□□□ -1.76
CDS1	YBR029C	YGL034C	P53186	121 aa		4.05	□□□□□ -1.76
CDS1	YBR029C	YPL247C	Q12523	523 aa		4.05	□□□□□ -1.76
CDS1	YBR029C	YKL183C-A	Q3E765	70 aa		4.05	□□□□□ -1.76
CDS1	YBR029C	TAO3	P40468	2376 aa		4.05	□□□□□ -1.76
CDS1	YBR029C	MATALPHA2	P0CY08	210 aa		4.04	□□□□□ -1.76
CDS1	YBR029C	HMLALPHA2	P0CY09	210 aa		4.04	□□□□□ -1.76
CDS1	YBR029C	SNA3	P14359	133 aa		4.04	□□□□□ -1.76
CDS1	YBR029C	ECM13	P38195	257 aa		4.04	□□□□□ -1.76
CDS1	YBR029C	YNL194C	P40169	301 aa		4.04	□□□□□ -1.76
CDS1	YBR029C	PFS2	P42841	465 aa	Known RBP	4.04	□□□□□ -1.76
CDS1	YBR029C	FYV6	P53913	173 aa		4.04	□□□□□ -1.76
CDS1	YBR029C	YMR226C	Q05016	267 aa	Known RBP	4.04	□□□□□ -1.76
CDS1	YBR029C	YLR179C	Q06252	201 aa	Known RBP	4.04	□□□□□ -1.76
CDS1	YBR029C	NUM1	Q00402	2748 aa		4.04	□□□□□ -1.76
CDS1	YBR029C	UTP10	P42945	1769 aa	Known RBP	4.04	□□□□□ -1.76
CDS1	YBR029C	IPP1	P00817	287 aa	Known RBP	4.03	□□□□□ -1.76
CDS1	YBR029C	SPT3	P06844	337 aa		4.03	□□□□□ -1.76
CDS1	YBR029C	TOM40	P23644	387 aa	Known RBP	4.03	□□□□□ -1.76
CDS1	YBR029C	ILM1	P47155	203 aa		4.03	□□□□□ -1.76
CDS1	YBR029C	YNL046W	P53956	172 aa		4.03	□□□□□ -1.76
CDS1	YBR029C	PMD1	P32634	1753 aa		4.03	□□□□□ -1.76
CDS1	YBR029C	HIS3	P06633	220 aa		4.02	□□□□□ -1.77
CDS1	YBR029C	PPH21	P23594	369 aa		4.02	□□□□□ -1.77
CDS1	YBR029C	MDM34	P53083	459 aa		4.02	□□□□□ -1.77
CDS1	YBR029C	YMR114C	Q04471	368 aa	Known RBP	4.02	□□□□□ -1.77
CDS1	YBR029C	SSQ1	Q05931	657 aa	Predicted RBP	4.02	□□□□□ -1.77
CDS1	YBR029C	YRA1	Q12159	226 aa	Known RBP	4.02	□□□□□ -1.77
CDS1	YBR029C	JLP1	Q12358	412 aa		4.02	□□□□□ -1.77
CDS1	YBR029C	DCN1	Q12395	269 aa		4.02	□□□□□ -1.77
CDS1	YBR029C	SEC22	P22214	214 aa		4.02	□□□□□ -1.77
CDS1	YBR029C	ALG13	P53178	202 aa		4.02	□□□□□ -1.77
CDS1	YBR029C	GEP5	Q12393	293 aa		4.02	□□□□□ -1.77
CDS1	YBR029C	EMP46	Q12396	444 aa		4.02	□□□□□ -1.77
CDS1	YBR029C	TOR1	P35169	2470 aa		4.01	□□□□□ -1.77
CDS1	YBR029C	YLR462W	O13556	202 aa		4.01	□□□□□ -1.77
CDS1	YBR029C	RAD10	P06838	210 aa		4.01	□□□□□ -1.77
CDS1	YBR029C	ERD2	P18414	219 aa		4.01	□□□□□ -1.77
CDS1	YBR029C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
CDS1	YBR029C	AGA2	P32781	87 aa		4.01	□□□□□ -1.77
CDS1	YBR029C	YEL075C	P39972	122 aa		4.01	□□□□□ -1.77
CDS1	YBR029C	RFC4	P40339	323 aa	Known RBP	4.01	□□□□□ -1.77
CDS1	YBR029C	YJR149W	P47177	404 aa		4.01	□□□□□ -1.77
CDS1	YBR029C	NUP57	P48837	541 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms