RNA–Protein interactions for RNA: YAR042W

SWH1, Transcript of Protein similar to mammalian oxysterol-binding protein, yeast

Gene SWH1, Length 3,567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWH1	YAR042W	YJR012C	P47087	207 aa		3.38	□□□□□ -1.87
SWH1	YAR042W	YNR066C	P53752	436 aa		3.38	□□□□□ -1.87
SWH1	YAR042W	SNO2	P53823	222 aa		3.38	□□□□□ -1.87
SWH1	YAR042W	MRX8	Q05473	314 aa		3.38	□□□□□ -1.87
SWH1	YAR042W	GIC2	Q06648	383 aa		3.38	□□□□□ -1.87
SWH1	YAR042W	NAT5	Q08689	176 aa		3.38	□□□□□ -1.87
SWH1	YAR042W	SME1	Q12330	94 aa	Predicted RBP	3.38	□□□□□ -1.87
SWH1	YAR042W	PAU19	P0CE85	124 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	PAU21	P0CE86	164 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	PAU22	P0CE87	164 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	STE18	P18852	110 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	NPR1	P22211	790 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	PAU3	P25610	124 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	SKN7	P38889	622 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	SLZ1	P40167	298 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	OYE3	P41816	400 aa	Predicted RBP	3.37	□□□□□ -1.87
SWH1	YAR042W	MTM1	P53320	366 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	SCW4	P53334	386 aa	Known RBP	3.37	□□□□□ -1.87
SWH1	YAR042W	YNR061C	P53747	219 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	YLR118C	Q12354	227 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	IZH2	Q12442	317 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
SWH1	YAR042W	CYT1	P07143	309 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	HAP3	P13434	144 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	BET2	P20133	325 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	GAS1	P22146	559 aa	Known RBP	3.37	□□□□□ -1.87
SWH1	YAR042W	UMP1	P38293	148 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	CUE1	P38428	203 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	PFS1	P38872	237 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	YAL037W	P39728	267 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	LRO1	P40345	661 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	PAU5	P43575	122 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	MATALPHA1	P0CY06	175 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	HMLALPHA1	P0CY07	175 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	RML2	P32611	393 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	TRS65	P32893	560 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	YBR292C	P38357	123 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	RPP1	P38786	293 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	MNL1	P38888	796 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	PAC1	P39946	494 aa	Known RBP	3.37	□□□□□ -1.87
SWH1	YAR042W	ATC1	Q04005	294 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	FCY22	Q12119	530 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	YCT1	Q12235	531 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	ATG5	Q12380	294 aa		3.37	□□□□□ -1.87
SWH1	YAR042W	RPL31A	P0C2H8	113 aa	Known RBP	3.36	□□□□□ -1.87
SWH1	YAR042W	RPL31B	P0C2H9	113 aa	Known RBP	3.36	□□□□□ -1.87
SWH1	YAR042W	BGL2	P15703	313 aa	Known RBP	3.36	□□□□□ -1.87
SWH1	YAR042W	SAC7	P17121	654 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	LSB5	P25369	354 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	TRR1	P29509	319 aa	Known RBP	3.36	□□□□□ -1.87
SWH1	YAR042W	ANS1	P38832	159 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	YIL067C	P40514	678 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	PHS1	P40857	217 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	YLR152C	P54072	576 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	YDR366C	P87287	132 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	YML053C	Q04978	212 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	FSH2	Q05015	223 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	FRQ1	Q06389	190 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	OPI10	Q08202	246 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	WTM2	Q12206	467 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	QCR2	P07257	368 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	SRB5	P32585	307 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	AIM29	P36154	155 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	YMR262W	P38430	313 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	WSS1	P38838	269 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	SMK1	P41808	388 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	COQ5	P49017	307 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	YML096W	Q04489	525 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	YOL073C	Q08232	322 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	AKR2	Q12013	749 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	ERV2	Q12284	196 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	SWM1	Q12379	170 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	NPC2	Q12408	173 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	RAX2	Q12465	1220 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	YOR062C	P36025	268 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	RPL13B	P40212	199 aa	Known RBP	3.36	□□□□□ -1.87
SWH1	YAR042W	ATG27	P46989	271 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	BRR6	P53062	197 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	SHH3	Q04487	196 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	ASM4	Q05166	528 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	MCT1	Q12283	360 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	YDR262W	Q12331	272 aa		3.36	□□□□□ -1.87
SWH1	YAR042W	RPL13A	Q12690	199 aa	Predicted RBP	3.36	□□□□□ -1.87
SWH1	YAR042W	HTB1	P02293	131 aa	Known RBP	3.35	□□□□□ -1.87
SWH1	YAR042W	HTB2	P02294	131 aa		3.35	□□□□□ -1.87
SWH1	YAR042W	SPO13	P23624	291 aa		3.35	□□□□□ -1.87
SWH1	YAR042W	KRR1	P25586	316 aa	Predicted RBP	3.35	□□□□□ -1.87
SWH1	YAR042W	ARO4	P32449	370 aa	Known RBP	3.35	□□□□□ -1.87
SWH1	YAR042W	DAL3	P32459	195 aa		3.35	□□□□□ -1.87
SWH1	YAR042W	POP7	P38291	140 aa		3.35	□□□□□ -1.87
SWH1	YAR042W	OM14	P38325	134 aa		3.35	□□□□□ -1.87
SWH1	YAR042W	PEX7	P39108	375 aa		3.35	□□□□□ -1.87
SWH1	YAR042W	CFD1	P40558	293 aa		3.35	□□□□□ -1.87
SWH1	YAR042W	YJR011C	P47086	261 aa	Predicted RBP	3.35	□□□□□ -1.87
SWH1	YAR042W	HOL1	P53389	586 aa		3.35	□□□□□ -1.87
SWH1	YAR042W	RCE1	Q03530	315 aa		3.35	□□□□□ -1.87
SWH1	YAR042W	IRC13	Q08630	104 aa		3.35	□□□□□ -1.87
SWH1	YAR042W	PAR32	Q12515	295 aa	Known RBP	3.35	□□□□□ -1.87
SWH1	YAR042W	CET1	O13297	549 aa	Predicted RBP	3.35	□□□□□ -1.87
SWH1	YAR042W	CTA1	P15202	515 aa		3.35	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 59.7 ms