RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W BUD23P25627 275 aaPredicted RBP5.72□□□□□ -1.49
SWD1YAR003W ERG3P32353 365 aa5.72□□□□□ -1.49
SWD1YAR003W ARO4P32449 370 aaKnown RBP5.72□□□□□ -1.49
SWD1YAR003W YER079WP40052 210 aaKnown RBP5.72□□□□□ -1.49
SWD1YAR003W OST1P41543 476 aaKnown RBP5.72□□□□□ -1.49
SWD1YAR003W YFL051CP43552 160 aa5.72□□□□□ -1.49
SWD1YAR003W SSN8P47821 323 aa5.72□□□□□ -1.49
SWD1YAR003W GTF1P53260 183 aaPredicted RBP5.72□□□□□ -1.49
SWD1YAR003W YNL092WP53934 400 aa5.72□□□□□ -1.49
SWD1YAR003W YML018CQ03730 393 aa5.72□□□□□ -1.49
SWD1YAR003W DLT1Q04216 342 aa5.72□□□□□ -1.49
SWD1YAR003W YMR254CQ04838 102 aa5.72□□□□□ -1.49
SWD1YAR003W PIN3Q06449 215 aa5.72□□□□□ -1.49
SWD1YAR003W YLR125WQ12138 136 aa5.72□□□□□ -1.49
SWD1YAR003W TRM13Q12383 476 aa5.72□□□□□ -1.49
SWD1YAR003W PRM4Q12498 284 aa5.72□□□□□ -1.49
SWD1YAR003W HUT1Q12520 339 aa5.72□□□□□ -1.49
SWD1YAR003W REP2P03872 296 aa5.71□□□□□ -1.5
SWD1YAR003W URA3P03962 267 aa5.71□□□□□ -1.5
SWD1YAR003W YML003WP0CF16 290 aa5.71□□□□□ -1.5
SWD1YAR003W RPL3P14126 387 aaKnown RBP5.71□□□□□ -1.5
SWD1YAR003W SAR1P20606 190 aaKnown RBP5.71□□□□□ -1.5
SWD1YAR003W IFM1P25038 676 aa5.71□□□□□ -1.5
SWD1YAR003W YCP4P25349 247 aaKnown RBP5.71□□□□□ -1.5
SWD1YAR003W VAM7P32912 316 aa5.71□□□□□ -1.5
SWD1YAR003W YGP1P38616 354 aaKnown RBP5.71□□□□□ -1.5
SWD1YAR003W EGT2P42835 1041 aa5.71□□□□□ -1.5
SWD1YAR003W UFD1P53044 361 aa5.71□□□□□ -1.5
SWD1YAR003W FCY22Q12119 530 aa5.71□□□□□ -1.5
SWD1YAR003W SSA3P09435 649 aaKnown RBP5.7□□□□□ -1.5
SWD1YAR003W RPL43AP0CX25 92 aaKnown RBP5.7□□□□□ -1.5
SWD1YAR003W RPL43BP0CX26 92 aa5.7□□□□□ -1.5
SWD1YAR003W ATG22P25568 528 aa5.7□□□□□ -1.5
SWD1YAR003W ACH1P32316 526 aa5.7□□□□□ -1.5
SWD1YAR003W PAN3P36102 679 aaPredicted RBP5.7□□□□□ -1.5
SWD1YAR003W MRPL36P36531 177 aa5.7□□□□□ -1.5
SWD1YAR003W PRS2P38620 318 aaKnown RBP5.7□□□□□ -1.5
SWD1YAR003W YER121WP40076 114 aa5.7□□□□□ -1.5
SWD1YAR003W MRX5P47007 382 aa5.7□□□□□ -1.5
SWD1YAR003W YJR011CP47086 261 aaPredicted RBP5.7□□□□□ -1.5
SWD1YAR003W DIE2P50076 525 aa5.7□□□□□ -1.5
SWD1YAR003W MRPS16Q02608 121 aa5.7□□□□□ -1.5
SWD1YAR003W GRC3Q07845 632 aa5.7□□□□□ -1.5
SWD1YAR003W YOR385WQ08909 290 aa5.7□□□□□ -1.5
SWD1YAR003W NCE102Q12207 173 aaRIP-Chip data5.7□□□□□ -1.5not detected
SWD1YAR003W MED4Q12343 284 aa5.7□□□□□ -1.5
SWD1YAR003W ATG40Q99325 256 aa5.7□□□□□ -1.5
SWD1YAR003W PET20Q99373 253 aa5.7□□□□□ -1.5
SWD1YAR003W NHP6BP11633 99 aaKnown RBP5.69□□□□□ -1.5
SWD1YAR003W HNM1P19807 563 aa5.69□□□□□ -1.5
SWD1YAR003W RFA1P22336 621 aaKnown RBP5.69□□□□□ -1.5
SWD1YAR003W MRP17P28778 131 aa5.69□□□□□ -1.5
SWD1YAR003W PEX4P29340 183 aa5.69□□□□□ -1.5
SWD1YAR003W SPC29P33419 253 aa5.69□□□□□ -1.5
SWD1YAR003W MRPL27P36526 146 aaPredicted RBP5.69□□□□□ -1.5
SWD1YAR003W SHM2P37291 469 aaKnown RBP5.69□□□□□ -1.5
SWD1YAR003W LAG1P38703 411 aa5.69□□□□□ -1.5
SWD1YAR003W COS8P38723 381 aa5.69□□□□□ -1.5
SWD1YAR003W VMA22P38784 181 aa5.69□□□□□ -1.5
SWD1YAR003W BMT5P40493 336 aa5.69□□□□□ -1.5
SWD1YAR003W QRI1P43123 477 aaKnown RBP5.69□□□□□ -1.5
SWD1YAR003W TAF4P50105 388 aa5.69□□□□□ -1.5
SWD1YAR003W SKO1Q02100 647 aa5.69□□□□□ -1.5
SWD1YAR003W PRM15Q03262 622 aa5.69□□□□□ -1.5
SWD1YAR003W VBA1Q04301 562 aa5.69□□□□□ -1.5
SWD1YAR003W API2Q04413 109 aa5.69□□□□□ -1.5
SWD1YAR003W UPS1Q05776 175 aa5.69□□□□□ -1.5
SWD1YAR003W AAC1P04710 309 aa5.68□□□□□ -1.5
SWD1YAR003W SPS100P13130 326 aa5.68□□□□□ -1.5
SWD1YAR003W VMA8P32610 256 aaKnown RBP5.68□□□□□ -1.5
SWD1YAR003W FMT1P32785 401 aa5.68□□□□□ -1.5
SWD1YAR003W LNP1P38878 278 aa5.68□□□□□ -1.5
SWD1YAR003W CCS1P40202 249 aaKnown RBP5.68□□□□□ -1.5
SWD1YAR003W TIM10P87108 93 aa5.68□□□□□ -1.5
SWD1YAR003W SED1Q01589 338 aa5.68□□□□□ -1.5
SWD1YAR003W YMR279CQ03263 540 aa5.68□□□□□ -1.5
SWD1YAR003W CAB5Q03941 241 aa5.68□□□□□ -1.5
SWD1YAR003W GMC1Q04399 608 aa5.68□□□□□ -1.5
SWD1YAR003W LIP2Q06005 328 aa5.68□□□□□ -1.5
SWD1YAR003W SCP1Q08873 200 aa5.68□□□□□ -1.5
SWD1YAR003W BBP1Q12365 385 aa5.68□□□□□ -1.5
SWD1YAR003W TFB5Q3E7C1 72 aaPredicted RBP5.68□□□□□ -1.5
SWD1YAR003W UBA3Q99344 299 aa5.68□□□□□ -1.5
SWD1YAR003W PRP8P33334 2413 aaKnown RBP5.68□□□□□ -1.5
SWD1YAR003W PET494P07390 489 aaPredicted RBP5.67□□□□□ -1.5
SWD1YAR003W YLL053CP0CD98 152 aa5.67□□□□□ -1.5
SWD1YAR003W CKA1P15790 372 aa5.67□□□□□ -1.5
SWD1YAR003W CPR4P25334 318 aa5.67□□□□□ -1.5
SWD1YAR003W YCR016WP25617 290 aaKnown RBP5.67□□□□□ -1.5
SWD1YAR003W IMP1P28627 190 aa5.67□□□□□ -1.5
SWD1YAR003W SUA5P32579 426 aa5.67□□□□□ -1.5
SWD1YAR003W TCA17P32613 152 aa5.67□□□□□ -1.5
SWD1YAR003W MTR2P34232 184 aaKnown RBP5.67□□□□□ -1.5
SWD1YAR003W FIG1P38224 298 aa5.67□□□□□ -1.5
SWD1YAR003W BFR1P38934 470 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
SWD1YAR003W SWM2P40342 146 aa5.67□□□□□ -1.5
SWD1YAR003W BNA2P47125 453 aa5.67□□□□□ -1.5
SWD1YAR003W SLX9P53251 210 aaPredicted RBP5.67□□□□□ -1.5
SWD1YAR003W MRPL50P53724 139 aa5.67□□□□□ -1.5
SWD1YAR003W YDR286CQ05530 114 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms