RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	PSK1	P31374	1356 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	TOP2	P06786	1428 aa	Known RBP	4.16	□□□□□ -1.74
ECM1	YAL059W	HHF1	P02309	103 aa	Known RBP	4.16	□□□□□ -1.74
ECM1	YAL059W	RPL25	P04456	142 aa	Known RBP	4.16	□□□□□ -1.74
ECM1	YAL059W	SIR2	P06700	562 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	SEC4	P07560	215 aa	Known RBP	4.16	□□□□□ -1.74
ECM1	YAL059W	ERG24	P32462	438 aa	Known RBP	4.16	□□□□□ -1.74
ECM1	YAL059W	RPS1A	P33442	255 aa	Known RBP	4.16	□□□□□ -1.74
ECM1	YAL059W	YIL067C	P40514	678 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	YFL064C	P43540	174 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	NCA3	P46955	337 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	YJR015W	P47090	510 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	YMD8	Q03697	442 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	YDR249C	Q03787	373 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	YDR124W	Q04608	324 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	SHH4	Q06236	168 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	FRQ1	Q06389	190 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	YPR202W	Q08993	238 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	AKR2	Q12013	749 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	THP3	Q12049	470 aa	Known RBP	4.16	□□□□□ -1.74
ECM1	YAL059W	YLR046C	Q12253	270 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	SLO1	Q3E784	85 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	YPL229W	Q99395	206 aa		4.16	□□□□□ -1.74
ECM1	YAL059W	KIN28	P06242	306 aa		4.15	□□□□□ -1.75
ECM1	YAL059W	CPR4	P25334	318 aa		4.15	□□□□□ -1.75
ECM1	YAL059W	LDS1	P31379	325 aa		4.15	□□□□□ -1.75
ECM1	YAL059W	PTM1	P32857	523 aa		4.15	□□□□□ -1.75
ECM1	YAL059W	PMU1	P36069	295 aa		4.15	□□□□□ -1.75
ECM1	YAL059W	YBR285W	P38354	144 aa		4.15	□□□□□ -1.75
ECM1	YAL059W	YJL213W	P40896	331 aa		4.15	□□□□□ -1.75
ECM1	YAL059W	YDR278C	Q05612	105 aa		4.15	□□□□□ -1.75
ECM1	YAL059W	YHC1	Q05900	231 aa	Known RBP	4.15	□□□□□ -1.75
ECM1	YAL059W	HRI1	Q05905	244 aa	Known RBP	4.15	□□□□□ -1.75
ECM1	YAL059W	MSA1	Q08471	629 aa		4.15	□□□□□ -1.75
ECM1	YAL059W	SYC1	Q08553	188 aa	Predicted RBP	4.15	□□□□□ -1.75
ECM1	YAL059W	YHR214C-E	Q8TGK0	99 aa		4.15	□□□□□ -1.75
ECM1	YAL059W	CYC3	P06182	269 aa		4.14	□□□□□ -1.75
ECM1	YAL059W	IMP1	P28627	190 aa		4.14	□□□□□ -1.75
ECM1	YAL059W	TRR2	P38816	342 aa		4.14	□□□□□ -1.75
ECM1	YAL059W	LSM12	P38828	187 aa	Known RBP	4.14	□□□□□ -1.75
ECM1	YAL059W	ILM1	P47155	203 aa		4.14	□□□□□ -1.75
ECM1	YAL059W	SDS23	P53172	527 aa		4.14	□□□□□ -1.75
ECM1	YAL059W	ELP3	Q02908	557 aa	Known RBP	4.14	□□□□□ -1.75
ECM1	YAL059W	ADD37	Q03233	198 aa		4.14	□□□□□ -1.75
ECM1	YAL059W	NEJ1	Q06148	342 aa		4.14	□□□□□ -1.75
ECM1	YAL059W	YIL177C	P40434	1758 aa		4.14	□□□□□ -1.75
ECM1	YAL059W	YJL225C	P40889	1758 aa		4.14	□□□□□ -1.75
ECM1	YAL059W	TRP1	P00912	224 aa		4.13	□□□□□ -1.75
ECM1	YAL059W	ATR1	P13090	542 aa		4.13	□□□□□ -1.75
ECM1	YAL059W	MSI1	P13712	422 aa		4.13	□□□□□ -1.75
ECM1	YAL059W	YCR025C	P25352	136 aa		4.13	□□□□□ -1.75
ECM1	YAL059W	SFK1	P35735	353 aa		4.13	□□□□□ -1.75
ECM1	YAL059W	HPM1	P40481	377 aa		4.13	□□□□□ -1.75
ECM1	YAL059W	ERV29	P53337	310 aa		4.13	□□□□□ -1.75
ECM1	YAL059W	AAH1	P53909	347 aa		4.13	□□□□□ -1.75
ECM1	YAL059W	YPL113C	Q02961	396 aa		4.13	□□□□□ -1.75
ECM1	YAL059W	SDH7	Q04401	133 aa		4.13	□□□□□ -1.75
ECM1	YAL059W	YBL008W-A	Q3E821	79 aa		4.13	□□□□□ -1.75
ECM1	YAL059W	IPP1	P00817	287 aa	Known RBP	4.12	□□□□□ -1.75
ECM1	YAL059W	PHO2	P07269	559 aa		4.12	□□□□□ -1.75
ECM1	YAL059W	YKL102C	P34249	101 aa		4.12	□□□□□ -1.75
ECM1	YAL059W	POP8	P38208	133 aa		4.12	□□□□□ -1.75
ECM1	YAL059W	YHL044W	P38727	235 aa		4.12	□□□□□ -1.75
ECM1	YAL059W	HMF1	P40037	129 aa	Known RBP	4.12	□□□□□ -1.75
ECM1	YAL059W	YNL208W	P40159	199 aa	Known RBP	4.12	□□□□□ -1.75
ECM1	YAL059W	CAT5	P41735	233 aa		4.12	□□□□□ -1.75
ECM1	YAL059W	DIM1	P41819	318 aa	Known RBP	4.12	□□□□□ -1.75
ECM1	YAL059W	YGL260W	P53056	76 aa		4.12	□□□□□ -1.75
ECM1	YAL059W	CLD1	P53264	445 aa		4.12	□□□□□ -1.75
ECM1	YAL059W	ARL3	Q02804	198 aa		4.12	□□□□□ -1.75
ECM1	YAL059W	YML108W	Q03759	105 aa		4.12	□□□□□ -1.75
ECM1	YAL059W	GPI17	Q04080	534 aa		4.12	□□□□□ -1.75
ECM1	YAL059W	YLR177W	Q06251	628 aa		4.12	□□□□□ -1.75
ECM1	YAL059W	DGA1	Q08650	418 aa		4.12	□□□□□ -1.75
ECM1	YAL059W	RPL2A	P0CX45	254 aa	Known RBP	4.11	□□□□□ -1.75
ECM1	YAL059W	RPL2B	P0CX46	254 aa	Known RBP	4.11	□□□□□ -1.75
ECM1	YAL059W	RNA14	P25298	677 aa	Known RBP	4.11	□□□□□ -1.75
ECM1	YAL059W	FMP46	P36141	133 aa	Known RBP	4.11	□□□□□ -1.75
ECM1	YAL059W	TVP38	P36164	337 aa		4.11	□□□□□ -1.75
ECM1	YAL059W	YEA4	P40004	342 aa		4.11	□□□□□ -1.75
ECM1	YAL059W	YIL012W	P40551	113 aa		4.11	□□□□□ -1.75
ECM1	YAL059W	GPI14	P47088	403 aa	Known RBP	4.11	□□□□□ -1.75
ECM1	YAL059W	MDM34	P53083	459 aa		4.11	□□□□□ -1.75
ECM1	YAL059W	YGL101W	P53144	215 aa		4.11	□□□□□ -1.75
ECM1	YAL059W	TIM8	P57744	87 aa		4.11	□□□□□ -1.75
ECM1	YAL059W	HCR1	Q05775	265 aa	Known RBP	4.11	□□□□□ -1.75
ECM1	YAL059W	MBF1	O14467	151 aa	Known RBP	4.1	□□□□□ -1.75
ECM1	YAL059W	MRS3	P10566	314 aa		4.1	□□□□□ -1.75
ECM1	YAL059W	CPR1	P14832	162 aa	Known RBP	4.1	□□□□□ -1.75
ECM1	YAL059W	TFC1	P32367	649 aa		4.1	□□□□□ -1.75
ECM1	YAL059W	GSP1	P32835	219 aa	Known RBP	4.1	□□□□□ -1.75
ECM1	YAL059W	GSP2	P32836	220 aa	Known RBP	4.1	□□□□□ -1.75
ECM1	YAL059W	FMP23	P38231	175 aa		4.1	□□□□□ -1.75
ECM1	YAL059W	EDC2	P40023	145 aa	Predicted RBP	4.1	□□□□□ -1.75
ECM1	YAL059W	MNN5	P46982	586 aa		4.1	□□□□□ -1.75
ECM1	YAL059W	HHT1	P61830	136 aa		4.1	□□□□□ -1.75
ECM1	YAL059W	DID2	P69771	204 aa		4.1	□□□□□ -1.75
ECM1	YAL059W	AYT1	Q12226	474 aa		4.1	□□□□□ -1.75
ECM1	YAL059W	YHR139C-A	O13536	103 aa		4.09	□□□□□ -1.75
ECM1	YAL059W	CDC7	P06243	507 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms