RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 SLC16A4O15374 487 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 KINO60870 393 aaKnown RBP14.21□□□□□ -0.13
SF3B3-202ENST00000562722 ECI2O75521 394 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 MCF2P10911 925 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 CEBPBP17676 345 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 MCM4P33991 863 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 MATR3P43243 847 aaKnown RBP eCLIP14.21□□□□□ -0.13
SF3B3-202ENST00000562722 CSTF1Q05048 431 aaKnown RBP14.21□□□□□ -0.13
SF3B3-202ENST00000562722 RAD51AP2Q09MP3 1159 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 STRN3Q13033 797 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 CTXN3Q4LDR2 81 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 ZBTB41Q5SVQ8 909 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 SLC8B1Q6J4K2 584 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 MPZL3Q6UWV2 235 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 DTHD1Q6ZMT9 781 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 DAW1Q8N136 415 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 ELMOD1Q8N336 334 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 RUBCNQ92622 972 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 C18orf25Q96B23 403 aaPredicted RBP14.21□□□□□ -0.13
SF3B3-202ENST00000562722 ZMAT2Q96NC0 199 aaKnown RBP14.21□□□□□ -0.13
SF3B3-202ENST00000562722 DDX23Q9BUQ8 820 aaKnown RBP14.21□□□□□ -0.13
SF3B3-202ENST00000562722 PTPRHQ9HD43 1115 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 LTB4R2Q9NPC1 389 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 SH2B1Q9NRF2 756 aaPredicted RBP14.21□□□□□ -0.13
SF3B3-202ENST00000562722 ARHGAP28Q9P2N2 729 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 PCDHB6Q9Y5E3 794 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 MYH15Q9Y2K3 1946 aa14.21□□□□□ -0.14
SF3B3-202ENST00000562722 COL4A3Q01955 1670 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 ARHGEF37A1IGU5 675 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 SFI1A8K8P3 1242 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 LAD1O00515 517 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 SYN3O14994 580 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 KCNE1P15382 129 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 CDC25AP30304 524 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 RPL9P32969 192 aaKnown RBP14.2□□□□□ -0.14
SF3B3-202ENST00000562722 XKR4Q5GH76 650 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 CYP4A22Q5TCH4 519 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 ZNF280DQ6N043 979 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 RINT1Q6NUQ1 792 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 ALKAL1Q6UXT8 129 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 ZNF852Q6ZMS4 543 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 PDZD4Q76G19 769 aaPredicted RBP14.2□□□□□ -0.14
SF3B3-202ENST00000562722 OSBPL6Q9BZF3 934 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 CNTN3Q9P232 1028 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 FBXL5Q9UKA1 691 aa14.2□□□□□ -0.14
SF3B3-202ENST00000562722 MRPS17Q9Y2R5 130 aaKnown RBP14.2□□□□□ -0.14
SF3B3-202ENST00000562722 VPS13AQ96RL7 3174 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 ZNF197O14709 1029 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 NCAM2O15394 837 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 ABLIM3O94929 683 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 SEC24AO95486 1093 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 CPB1P15086 417 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 ATF2P15336 505 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 U2AF2P26368 475 aaKnown RBP eCLIP14.19□□□□□ -0.14
SF3B3-202ENST00000562722 MARCKSP29966 332 aaPredicted RBP14.19□□□□□ -0.14
SF3B3-202ENST00000562722 MAGEA9P43362 315 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 TOB1P50616 345 aaPredicted RBP14.19□□□□□ -0.14
SF3B3-202ENST00000562722 SMTNP53814 917 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 GRM2Q14416 872 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 NOLC1Q14978 699 aaKnown RBP eCLIP14.19□□□□□ -0.143e-8■■■□□ 18.2
SF3B3-202ENST00000562722 SEZ6Q53EL9 994 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 MCTP1Q6DN14 999 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 TANGO2Q6ICL3 276 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 IQCEQ6IPM2 695 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 C1orf186Q6ZWK4 172 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 TAS1R3Q7RTX0 852 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 TCEAL8Q8IYN2 117 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 MAML2Q8IZL2 1156 aaPredicted RBP14.19□□□□□ -0.14
SF3B3-202ENST00000562722 APPL2Q8NEU8 664 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 ATRIPQ8WXE1 791 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 ELSPBP1Q96BH3 223 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 RMDN1Q96DB5 314 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 CDK5RAP3Q96JB5 506 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 TIPINQ9BVW5 301 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 PLA2G2FQ9BZM2 168 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 BRD9Q9H8M2 597 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 C17orf75Q9HAS0 396 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 HEBP1Q9NRV9 189 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 FBXO4Q9UKT5 387 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 INSL5Q9Y5Q6 135 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 DOCK6Q96HP0 2047 aa14.19□□□□□ -0.14
SF3B3-202ENST00000562722 GVINP1Q7Z2Y8 2422 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 TOM1L1O75674 476 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 PROZP22891 400 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 TARSP26639 723 aaKnown RBP14.18□□□□□ -0.14
SF3B3-202ENST00000562722 PRPHP41219 470 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 ADCY1Q08828 1119 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 MAPK7Q13164 816 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 ZNF528Q3MIS6 628 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 TPGS2Q68CL5 300 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 KCNK18Q7Z418 384 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 DCLK2Q8N568 766 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 TCEAL4Q96EI5 215 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 BICD1Q96G01 975 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 ZBTB45Q96K62 511 aaPredicted RBP14.18□□□□□ -0.14
SF3B3-202ENST00000562722 SUSD3Q96L08 255 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 ZNF512Q96ME7 567 aaPredicted RBP14.18□□□□□ -0.14
SF3B3-202ENST00000562722 TBC1D32Q96NH3 1257 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 NELL2Q99435 816 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 PLIN2Q99541 437 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms