RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TCERG1LQ5VWI1 586 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 GSTCDQ8NEC7 633 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 PPP1R13BQ96KQ4 1090 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 CRACR2AQ9BSW2 395 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 LSM14BQ9BX40 385 aaKnown RBP17.87■□□□□ 0.45
TPM1-219ENST00000559397 GANQ9H2C0 597 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 RSAD1Q9HA92 442 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 PLEKHA5Q9HAU0 1116 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 TRMT1Q9NXH9 659 aaKnown RBP17.87■□□□□ 0.45
TPM1-219ENST00000559397 KLK14Q9P0G3 267 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 CEP72Q9P209 647 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 PDCD11Q14690 1871 aaKnown RBP17.87■□□□□ 0.45
TPM1-219ENST00000559397 CEP290O15078 2479 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 INPPL1O15357 1258 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 FGFR1P11362 822 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 AFF1P51825 1210 aaKnown RBP17.87■□□□□ 0.45
TPM1-219ENST00000559397 ENPEPQ07075 957 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 TSR1Q2NL82 804 aaKnown RBP17.87■□□□□ 0.45
TPM1-219ENST00000559397 CLLU1OSQ5K130 101 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 TOGARAM2Q6ZUX3 1019 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 NYAP1Q6ZVC0 841 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 GAD1Q99259 594 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 TOPORSQ9NS56 1045 aaPredicted RBP17.87■□□□□ 0.45
TPM1-219ENST00000559397 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
TPM1-219ENST00000559397 CNTN3Q9P232 1028 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 PLAGL2Q9UPG8 496 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 ZBBXA8MT70 800 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 IL18RAPO95256 599 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 KRT13P13646 458 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 PON1P27169 355 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 MLH1P40692 756 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 FMO5P49326 533 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 EXOC3L4Q17RC7 722 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 C9orf50Q5SZB4 431 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 C1orf220Q5T0J3 134 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 GBP6Q6ZN66 633 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 CD302Q8IX05 232 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 REXO1L1PQ8IX06 675 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 PARD3BQ8TEW8 1205 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 ZFP42Q96MM3 310 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 ZMAT2Q96NC0 199 aaKnown RBP17.86■□□□□ 0.45
TPM1-219ENST00000559397 CHP1Q99653 195 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 ASB7Q9H672 318 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 PDE11AQ9HCR9 933 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 MIOSQ9NXC5 875 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 LRFN2Q9ULH4 789 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 PPP2R2CQ9Y2T4 447 aa17.86■□□□□ 0.45
TPM1-219ENST00000559397 FNDC1Q4ZHG4 1894 aaPredicted RBP17.85■□□□□ 0.45
TPM1-219ENST00000559397 COL4A6Q14031 1691 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 ARL5CA6NH57 179 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 PTGESO14684 152 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 ZSCAN12O43309 604 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 UPP2O95045 317 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 VAMP7P51809 220 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 DLG4P78352 724 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 CLDN10P78369 228 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 SURF1Q15526 300 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 PDXDC1Q6P996 788 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.85■□□□□ 0.45
TPM1-219ENST00000559397 TMCO2Q7Z6W1 182 aaPredicted RBP17.85■□□□□ 0.45
TPM1-219ENST00000559397 HELQQ8TDG4 1101 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 TMC2Q8TDI7 906 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 FAM212AQ96EL1 285 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 NUCKS1Q9H1E3 243 aaKnown RBP17.85■□□□□ 0.45
TPM1-219ENST00000559397 ZNHIT6Q9NWK9 470 aaKnown RBP17.85■□□□□ 0.45
TPM1-219ENST00000559397 FBXL5Q9UKA1 691 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 ADGRG1Q9Y653 693 aa17.85■□□□□ 0.45
TPM1-219ENST00000559397 LAMA2P24043 3122 aaKnown RBP17.85■□□□□ 0.45
TPM1-219ENST00000559397 PTPRJQ12913 1337 aa17.84■□□□□ 0.45
TPM1-219ENST00000559397 LRRIQ3A6PVS8 624 aaPredicted RBP17.84■□□□□ 0.45
TPM1-219ENST00000559397 PMM2O15305 246 aa17.84■□□□□ 0.45
TPM1-219ENST00000559397 DGKIO75912 1065 aa17.84■□□□□ 0.45
TPM1-219ENST00000559397 KCNE1P15382 129 aa17.84■□□□□ 0.45
TPM1-219ENST00000559397 SLC9A1P19634 815 aa17.84■□□□□ 0.45
TPM1-219ENST00000559397 GATMP50440 423 aa17.84■□□□□ 0.45
TPM1-219ENST00000559397 MLLT1Q03111 559 aaPredicted RBP17.84■□□□□ 0.45
TPM1-219ENST00000559397 SHHQ15465 462 aa17.84■□□□□ 0.45
TPM1-219ENST00000559397 KLHDC7AQ5VTJ3 777 aa17.84■□□□□ 0.45
TPM1-219ENST00000559397 EFCAB13Q8IY85 973 aa17.84■□□□□ 0.45
TPM1-219ENST00000559397 SYN2Q92777 582 aaPredicted RBP17.84■□□□□ 0.45
TPM1-219ENST00000559397 CCDC127Q96BQ5 260 aa17.84■□□□□ 0.45
TPM1-219ENST00000559397 CASD1Q96PB1 797 aa17.84■□□□□ 0.45
TPM1-219ENST00000559397 POP1Q99575 1024 aaKnown RBP17.84■□□□□ 0.45
TPM1-219ENST00000559397 RC3H2Q9HBD1 1191 aaKnown RBP17.84■□□□□ 0.45
TPM1-219ENST00000559397 SIX2Q9NPC8 291 aa17.84■□□□□ 0.45
TPM1-219ENST00000559397 RANBP2P49792 3224 aaKnown RBP17.84■□□□□ 0.45
TPM1-219ENST00000559397 SMIM28A0A1B0GU29 152 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 P4HA2O15460 535 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 HOXA2O43364 376 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 NFICP08651 508 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 TRIM49P0CI25 452 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 TRIM49CP0CI26 452 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 ZBTB6Q15916 424 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 CBWD6Q4V339 395 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 CBWD3Q5JTY5 395 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 CBWD5Q5RIA9 395 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 JADE1Q6IE81 842 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 GLB1LQ6UWU2 654 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 RRAGAQ7L523 313 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 PHOSPHO2Q8TCD6 241 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms