RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 STT3AP46977 705 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 PNOCQ13519 176 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 MORC3Q14149 939 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 GIT2Q14161 759 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 IQCB1Q15051 598 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 NFIL3Q16649 462 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 IER5Q5VY09 327 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 CDCA2Q69YH5 1023 aaPredicted RBP4.43□□□□□ -1.7
ZEB1-212ENST00000558655 PADI6Q6TGC4 694 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 EPM2AIP1Q7L775 607 aaPredicted RBP4.43□□□□□ -1.7
ZEB1-212ENST00000558655 C11orf74Q86VG3 221 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 DAW1Q8N136 415 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 GJD3Q8N144 294 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 TCP11Q8WWU5 503 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 KIFAP3Q92845 792 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 FIZ1Q96SL8 496 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 RUSC1Q9BVN2 902 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 ZNF576Q9H609 170 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 ATP6V0A4Q9HBG4 840 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 RMND1Q9NWS8 449 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 KIAA1468Q9P260 1216 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 GTF2IRD1Q9UHL9 959 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 MICAL3Q7RTP6 2002 aa4.43□□□□□ -1.7
ZEB1-212ENST00000558655 ARHGEF35A5YM69 484 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 H0YCG3 227 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 EIF3DO15371 548 aaKnown RBP eCLIP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 AKAP10O43572 662 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 FOXD2O60548 495 aaPredicted RBP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 CAVIN2O95810 425 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 PIGRP01833 764 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 SMIM10L2AP0DMW4 78 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 SMIM10L2BP0DMW5 78 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 GNAT1P11488 350 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 DNAJB2P25686 324 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 NCKAP1LP55160 1127 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 SNRPFP62306 86 aaKnown RBP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 CYP4A11Q02928 519 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 SLC20A2Q08357 652 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 CCDC15Q0P6D6 951 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 EMC2Q15006 297 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 PCBP1Q15365 356 aaKnown RBP eCLIP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 KCNA10Q16322 511 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 TRIM71Q2Q1W2 868 aaKnown RBP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 PROX2Q3B8N5 592 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 FAM133BQ5BKY9 247 aaKnown RBP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 MTHFD1LQ6UB35 978 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 CAPN12Q6ZSI9 719 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 GPBP1Q86WP2 473 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 DDX42Q86XP3 938 aaKnown RBP eCLIP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 FAM178BQ8IXR5 827 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 ZC3H3Q8IXZ2 948 aaKnown RBP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 STAMQ92783 540 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 LENG1Q96BZ8 264 aaPredicted RBP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 CTAGE1Q96RT6 745 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 POP1Q99575 1024 aaKnown RBP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 BPIFA3Q9BQP9 254 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 BHMT2Q9H2M3 363 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 RNPEPQ9H4A4 650 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 SRA1Q9HD15 236 aaKnown RBP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 NEUROD4Q9HD90 331 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 SAMM50Q9Y512 469 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 SQORQ9Y6N5 450 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 COL4A6Q14031 1691 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 ZMYM2Q9UBW7 1377 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 CITO14578 2027 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 A0A1W2PQ45 241 aaPredicted RBP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 A0A1W2PQY0 241 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 H0Y3Z8 333 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 CD4P01730 458 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 ASGR1P07306 291 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 C6orf222P0C671 652 aaPredicted RBP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 ZNF286BP0CG31 522 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 PLS3P13797 630 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 INSRRP14616 1297 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 PSMA3P25788 255 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 NAMPTP43490 491 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 CBX1P83916 185 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 ENPEPQ07075 957 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 PPFIA1Q13136 1202 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 CUL4BQ13620 913 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 GRIK4Q16099 956 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 TPD52L1Q16890 204 aaPredicted RBP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 FAM187BQ17R55 369 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 XKR9Q5GH70 373 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 GNASQ5JWF2 1037 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 UTP14CQ5TAP6 766 aaKnown RBP4.42□□□□□ -1.7
ZEB1-212ENST00000558655 AGAP9Q5VTM2 703 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 TAF2Q6P1X5 1199 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 ANKRD33Q7Z3H0 272 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 SERINC5Q86VE9 423 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 ZNF410Q86VK4 478 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 CCDC65Q8IXS2 484 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 FBXL6Q8N531 539 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 ARL10Q8N8L6 244 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 LMBR1Q8WVP7 490 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 GLG1Q92896 1179 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 RMDN1Q96DB5 314 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 TOX2Q96NM4 488 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 DEPDC7Q96QD5 511 aa4.42□□□□□ -1.7
ZEB1-212ENST00000558655 REEP2Q9BRK0 252 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms