RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 CLTAP09496 248 aa24.69■■□□□ 1.54
PABPN1-207ENST00000556821 IDEP14735 1019 aa24.69■■□□□ 1.54
PABPN1-207ENST00000556821 KCNA1Q09470 495 aa24.69■■□□□ 1.54
PABPN1-207ENST00000556821 TPRNQ4KMQ1 711 aa24.69■■□□□ 1.54
PABPN1-207ENST00000556821 FAM171A1Q5VUB5 890 aa24.69■■□□□ 1.54
PABPN1-207ENST00000556821 RESP18Q5W5W9 173 aa24.69■■□□□ 1.54
PABPN1-207ENST00000556821 PRSS55Q6UWB4 352 aaPredicted RBP24.69■■□□□ 1.54
PABPN1-207ENST00000556821 ASCL5Q7RTU5 278 aa24.69■■□□□ 1.54
PABPN1-207ENST00000556821 C12orf76Q8N812 135 aaPredicted RBP24.69■■□□□ 1.54
PABPN1-207ENST00000556821 RIN2Q8WYP3 895 aaPredicted RBP24.69■■□□□ 1.54
PABPN1-207ENST00000556821 C18orf25Q96B23 403 aaPredicted RBP24.69■■□□□ 1.54
PABPN1-207ENST00000556821 UROC1Q96N76 676 aa24.69■■□□□ 1.54
PABPN1-207ENST00000556821 CUEDC2Q9H467 287 aa24.69■■□□□ 1.54
PABPN1-207ENST00000556821 MRPL44Q9H9J2 332 aaKnown RBP24.69■■□□□ 1.54
PABPN1-207ENST00000556821 OGTO15294 1046 aa24.68■■□□□ 1.54
PABPN1-207ENST00000556821 B3GAT3O94766 335 aa24.68■■□□□ 1.54
PABPN1-207ENST00000556821 ADH1AP07327 375 aa24.68■■□□□ 1.54
PABPN1-207ENST00000556821 DCLRE1AQ6PJP8 1040 aa24.68■■□□□ 1.54
PABPN1-207ENST00000556821 TMEM130Q8N3G9 435 aa24.68■■□□□ 1.54
PABPN1-207ENST00000556821 ADAM7Q9H2U9 754 aa24.68■■□□□ 1.54
PABPN1-207ENST00000556821 PANK4Q9NVE7 773 aa24.68■■□□□ 1.54
PABPN1-207ENST00000556821 STYXL1Q9Y6J8 313 aa24.68■■□□□ 1.54
PABPN1-207ENST00000556821 NOTCH4Q99466 2003 aa24.68■■□□□ 1.54
PABPN1-207ENST00000556821 RPL17P18621 184 aaKnown RBP24.67■■□□□ 1.54
PABPN1-207ENST00000556821 SPAG1Q07617 926 aa24.67■■□□□ 1.54
PABPN1-207ENST00000556821 ELAVL2Q12926 359 aaKnown RBP24.67■■□□□ 1.54
PABPN1-207ENST00000556821 ENOX2Q16206 610 aaKnown RBP24.67■■□□□ 1.54
PABPN1-207ENST00000556821 RARS2Q5T160 578 aaKnown RBP24.67■■□□□ 1.54
PABPN1-207ENST00000556821 ERMP1Q7Z2K6 904 aa24.67■■□□□ 1.54
PABPN1-207ENST00000556821 PIK3R5Q8WYR1 880 aa24.67■■□□□ 1.54
PABPN1-207ENST00000556821 TTPALQ9BTX7 342 aa24.67■■□□□ 1.54
PABPN1-207ENST00000556821 MSTO1Q9BUK6 570 aa24.67■■□□□ 1.54
PABPN1-207ENST00000556821 PHF7Q9BWX1 381 aaPredicted RBP24.67■■□□□ 1.54
PABPN1-207ENST00000556821 TRIM9Q9C026 710 aa24.67■■□□□ 1.54
PABPN1-207ENST00000556821 PLEKHA5Q9HAU0 1116 aa24.67■■□□□ 1.54
PABPN1-207ENST00000556821 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.67■■□□□ 1.541e-8■■■■□ 20.6
PABPN1-207ENST00000556821 FNIP2Q9P278 1114 aa24.67■■□□□ 1.54
PABPN1-207ENST00000556821 TUBGCP4Q9UGJ1 667 aa24.67■■□□□ 1.54
PABPN1-207ENST00000556821 CPSF3Q9UKF6 684 aaKnown RBP24.67■■□□□ 1.54
PABPN1-207ENST00000556821 I3L4J1 428 aa24.66■■□□□ 1.54
PABPN1-207ENST00000556821 POLR2DO15514 142 aaKnown RBP24.66■■□□□ 1.54
PABPN1-207ENST00000556821 ADRB2P07550 413 aa24.66■■□□□ 1.54
PABPN1-207ENST00000556821 WEE2P0C1S8 567 aa24.66■■□□□ 1.54
PABPN1-207ENST00000556821 MYBP10242 640 aa24.66■■□□□ 1.54
PABPN1-207ENST00000556821 FGFR3P22607 806 aa24.66■■□□□ 1.54
PABPN1-207ENST00000556821 BRCC3P46736 316 aa24.66■■□□□ 1.54
PABPN1-207ENST00000556821 ITIH3Q06033 890 aa24.66■■□□□ 1.54
PABPN1-207ENST00000556821 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.66■■□□□ 1.54
PABPN1-207ENST00000556821 GLYCTKQ8IVS8 523 aa24.66■■□□□ 1.54
PABPN1-207ENST00000556821 IQUBQ8NA54 791 aa24.66■■□□□ 1.54
PABPN1-207ENST00000556821 LNX1Q8TBB1 728 aaPredicted RBP24.66■■□□□ 1.54
PABPN1-207ENST00000556821 LEO1Q8WVC0 666 aaPredicted RBP24.66■■□□□ 1.54
PABPN1-207ENST00000556821 DDX27Q96GQ7 796 aaKnown RBP24.66■■□□□ 1.54
PABPN1-207ENST00000556821 H0Y858 1186 aa24.65■■□□□ 1.54
PABPN1-207ENST00000556821 PODXLO00592 558 aa24.65■■□□□ 1.54
PABPN1-207ENST00000556821 GCNT3O95395 438 aa24.65■■□□□ 1.54
PABPN1-207ENST00000556821 GLUD1P00367 558 aa24.65■■□□□ 1.54
PABPN1-207ENST00000556821 PPP2R3AQ06190 1150 aa24.65■■□□□ 1.54
PABPN1-207ENST00000556821 ZBTB6Q15916 424 aa24.65■■□□□ 1.54
PABPN1-207ENST00000556821 KYAT1Q16773 422 aa24.65■■□□□ 1.54
PABPN1-207ENST00000556821 L1TD1Q5T7N2 865 aaKnown RBP24.65■■□□□ 1.54
PABPN1-207ENST00000556821 CNNM4Q6P4Q7 775 aa24.65■■□□□ 1.54
PABPN1-207ENST00000556821 CEP57Q86XR8 500 aa24.65■■□□□ 1.54
PABPN1-207ENST00000556821 POMKQ9H5K3 350 aa24.65■■□□□ 1.54
PABPN1-207ENST00000556821 SFXN1Q9H9B4 322 aa24.65■■□□□ 1.54
PABPN1-207ENST00000556821 MAN1C1Q9NR34 630 aa24.65■■□□□ 1.54
PABPN1-207ENST00000556821 LACTBL1A8MY62 500 aa24.64■■□□□ 1.54
PABPN1-207ENST00000556821 ADSSP30520 456 aa24.64■■□□□ 1.54
PABPN1-207ENST00000556821 KRT85P78386 507 aa24.64■■□□□ 1.54
PABPN1-207ENST00000556821 PSMD5Q16401 504 aa24.64■■□□□ 1.54
PABPN1-207ENST00000556821 CES5AQ6NT32 575 aa24.64■■□□□ 1.54
PABPN1-207ENST00000556821 CCDC65Q8IXS2 484 aa24.64■■□□□ 1.54
PABPN1-207ENST00000556821 GLIS3Q8NEA6 775 aa24.64■■□□□ 1.54
PABPN1-207ENST00000556821 HPS3Q969F9 1004 aa24.64■■□□□ 1.54
PABPN1-207ENST00000556821 CLSTN3Q9BQT9 956 aa24.64■■□□□ 1.54
PABPN1-207ENST00000556821 RPF1Q9H9Y2 349 aaKnown RBP24.64■■□□□ 1.54
PABPN1-207ENST00000556821 FAM13BQ9NYF5 915 aa24.64■■□□□ 1.54
PABPN1-207ENST00000556821 TGM5O43548 720 aa24.63■■□□□ 1.53
PABPN1-207ENST00000556821 TKTP29401 623 aaKnown RBP24.63■■□□□ 1.53
PABPN1-207ENST00000556821 RPL9P32969 192 aaKnown RBP24.63■■□□□ 1.53
PABPN1-207ENST00000556821 ACOT2P49753 483 aa24.63■■□□□ 1.53
PABPN1-207ENST00000556821 CREMQ03060 361 aa24.63■■□□□ 1.53
PABPN1-207ENST00000556821 BECN1Q14457 450 aa24.63■■□□□ 1.53
PABPN1-207ENST00000556821 ADALQ6DHV7 355 aa24.63■■□□□ 1.53
PABPN1-207ENST00000556821 SLFN12LQ6IEE8 588 aa24.63■■□□□ 1.53
PABPN1-207ENST00000556821 LILRA6Q6PI73 481 aa24.63■■□□□ 1.53
PABPN1-207ENST00000556821 TMC5Q6UXY8 1006 aa24.63■■□□□ 1.53
PABPN1-207ENST00000556821 PALB2Q86YC2 1186 aa24.63■■□□□ 1.53
PABPN1-207ENST00000556821 LRRC27Q9C0I9 530 aa24.63■■□□□ 1.53
PABPN1-207ENST00000556821 MAGEF1Q9HAY2 307 aa24.63■■□□□ 1.53
PABPN1-207ENST00000556821 AGO2Q9UKV8 859 aaKnown RBP24.63■■□□□ 1.53
PABPN1-207ENST00000556821 PRR23AA6NEV1 266 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 ADAM12O43184 909 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 GALR2O43603 387 aaPredicted RBP24.62■■□□□ 1.53
PABPN1-207ENST00000556821 C1RP00736 705 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 SPATA31D3P0C874 917 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 CASP1P29466 404 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 NBL1P41271 181 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 ASIC1P78348 528 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 ALCAMQ13740 583 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms