RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 GPBP1Q86WP2 473 aa11.73□□□□□ -0.53
PNN-203ENST00000554117 MYCT1Q8N699 235 aa11.73□□□□□ -0.53
PNN-203ENST00000554117 KRI1Q8N9T8 703 aaKnown RBP11.73□□□□□ -0.53
PNN-203ENST00000554117 SNX27Q96L92 541 aa11.73□□□□□ -0.53
PNN-203ENST00000554117 NTPCRQ9BSD7 190 aaKnown RBP11.73□□□□□ -0.53
PNN-203ENST00000554117 PLEKHA5Q9HAU0 1116 aa11.73□□□□□ -0.53
PNN-203ENST00000554117 PARVGQ9HBI0 331 aa11.73□□□□□ -0.53
PNN-203ENST00000554117 CNTN3Q9P232 1028 aa11.73□□□□□ -0.53
PNN-203ENST00000554117 CDH7Q9ULB5 785 aa11.73□□□□□ -0.53
PNN-203ENST00000554117 KCNH3Q9ULD8 1083 aa11.73□□□□□ -0.53
PNN-203ENST00000554117 CA14Q9ULX7 337 aa11.73□□□□□ -0.53
PNN-203ENST00000554117 USP20Q9Y2K6 914 aa11.73□□□□□ -0.53
PNN-203ENST00000554117 MRPS23Q9Y3D9 190 aaKnown RBP11.73□□□□□ -0.53
PNN-203ENST00000554117 GFRA3O60609 400 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 POU2F2P09086 479 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 CLTAP09496 248 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 CPB1P15086 417 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 KCNE1P15382 129 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 PAX3P23760 479 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 TKTP29401 623 aaKnown RBP11.72□□□□□ -0.53
PNN-203ENST00000554117 TCF15Q12870 199 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 PLD1Q13393 1074 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 NAB2Q15742 525 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 CTXN3Q4LDR2 81 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 VARS2Q5ST30 1063 aaKnown RBP11.72□□□□□ -0.53
PNN-203ENST00000554117 CYP4A22Q5TCH4 519 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 TPGS2Q68CL5 300 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 ZC3H14Q6PJT7 736 aaKnown RBP11.72□□□□□ -0.53
PNN-203ENST00000554117 HAUS6Q7Z4H7 955 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 CD302Q8IX05 232 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 SLC44A3Q8N4M1 653 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 CEP120Q8N960 986 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 ZNF461Q8TAF7 563 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 ZNF707Q96C28 371 aaPredicted RBP11.72□□□□□ -0.53
PNN-203ENST00000554117 KIF12Q96FN5 646 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 ZNF512Q96ME7 567 aaPredicted RBP11.72□□□□□ -0.53
PNN-203ENST00000554117 MYADMQ96S97 322 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 RPF1Q9H9Y2 349 aaKnown RBP11.72□□□□□ -0.53
PNN-203ENST00000554117 CYP4F11Q9HBI6 524 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 GOLGA2P5Q9HBQ8 144 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 MAFFQ9ULX9 164 aa11.72□□□□□ -0.53
PNN-203ENST00000554117 UBQLN1Q9UMX0 589 aaKnown RBP11.72□□□□□ -0.53
PNN-203ENST00000554117 ZDBF2Q9HCK1 2354 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 NCAM2O15394 837 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 TRAK2O60296 914 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 PAPLNO95428 1278 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 EDN1P05305 212 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 MAPTP10636 758 aaKnown RBP11.71□□□□□ -0.53
PNN-203ENST00000554117 PROZP22891 400 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 BRCC3P46736 316 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 SLC12A3P55017 1021 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 NCKAP1LP55160 1127 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 DSTYKQ6XUX3 929 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 PDZD4Q76G19 769 aaPredicted RBP11.71□□□□□ -0.53
PNN-203ENST00000554117 TMEM105Q8N8V8 129 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 LEMD2Q8NC56 503 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 TMEM161BQ8NDZ6 487 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 BEST2Q8NFU1 509 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 LARP4BQ92615 738 aaKnown RBP11.71□□□□□ -0.53
PNN-203ENST00000554117 FAM212AQ96EL1 285 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 MMTAG2Q9BU76 263 aaKnown RBP11.71□□□□□ -0.53
PNN-203ENST00000554117 SMOC2Q9H3U7 446 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 ARHGEF3Q9NR81 526 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 FAM86C1Q9NVL1 165 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 R3HCC1Q9Y3T6 440 aaKnown RBP11.71□□□□□ -0.53
PNN-203ENST00000554117 NUMBLQ9Y6R0 609 aa11.71□□□□□ -0.53
PNN-203ENST00000554117 I3L4J1 428 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 TULP1O00294 542 aaPredicted RBP11.7□□□□□ -0.54
PNN-203ENST00000554117 OGTO15294 1046 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 NARSO43776 548 aaKnown RBP11.7□□□□□ -0.54
PNN-203ENST00000554117 ATF2P15336 505 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 CYP3A5P20815 502 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 ROR1Q01973 937 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 YWHAHQ04917 246 aaPredicted RBP11.7□□□□□ -0.54
PNN-203ENST00000554117 MCL1Q07820 350 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 HTR4Q13639 388 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 SF3A1Q15459 793 aaKnown RBP11.7□□□□□ -0.54
PNN-203ENST00000554117 IL17AQ16552 155 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 TMEM119Q4V9L6 283 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 XKR4Q5GH76 650 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 SLFN12LQ6IEE8 588 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 PHLDB3Q6NSJ2 640 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 ARMCX5Q6P1M9 558 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 ALKAL1Q6UXT8 129 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 CCDC105Q8IYK2 499 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 DAW1Q8N136 415 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 DTWD2Q8NBA8 298 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 GPR152Q8TDT2 470 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 RSAD2Q8WXG1 361 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 FGF13Q92913 245 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 NKD2Q969F2 451 aaPredicted RBP11.7□□□□□ -0.54
PNN-203ENST00000554117 SUSD3Q96L08 255 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 TBC1D32Q96NH3 1257 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 PNMA5Q96PV4 448 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 REEP2Q9BRK0 252 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 MSTO1Q9BUK6 570 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 TBC1D17Q9HA65 648 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 PTPRHQ9HD43 1115 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 SLC2A4RGQ9NR83 387 aa11.7□□□□□ -0.54
PNN-203ENST00000554117 GDE1Q9NZC3 331 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms