RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 AAASQ9NRG9 546 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 OLFML3Q9NRN5 406 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 GPRC5DQ9NZD1 345 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 NKX1-2Q9UD57 310 aaPredicted RBP13.16□□□□□ -0.3
HDAC7-230ENST00000552960 NAALADL1Q9UQQ1 740 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 CYP3A7-CYP3A51PA0A087WV96 503 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 GAS7O60861 476 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 CYP3A7P24462 503 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 RPS12P25398 132 aaKnown RBP13.16□□□□□ -0.3
HDAC7-230ENST00000552960 RAD23BP54727 409 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 MGAT5Q09328 741 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 ARHGEF18Q6ZSZ5 1173 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 FAM20AQ96MK3 541 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 SYT11Q9BT88 431 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 WNT8AQ9H1J5 351 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 RANBP17Q9H2T7 1088 aaKnown RBP13.16□□□□□ -0.3
HDAC7-230ENST00000552960 SLC5A4Q9NY91 659 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 ZMYND8Q9ULU4 1186 aaPredicted RBP13.16□□□□□ -0.3
HDAC7-230ENST00000552960 PCDHA3Q9Y5H8 950 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 TTC4O95801 387 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 CETPP11597 493 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 ATF2P15336 505 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 CHRNB2P17787 502 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 AP3B2Q13367 1082 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 GALNTL6Q49A17 601 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 IL31RAQ8NI17 732 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 ZNF483Q8TF39 744 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-230ENST00000552960 SERPINB12Q96P63 405 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 CBWD1Q9BRT8 395 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 OSBPL1AQ9BXW6 950 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 MYLK2Q9H1R3 596 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 ARHGEF3Q9NR81 526 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 ANAPC7Q9UJX3 599 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.15□□□□□ -0.3
HDAC7-230ENST00000552960 ARHGEF35A5YM69 484 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 KRT5P13647 590 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 KIF22Q14807 665 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 C11orf63Q6NUN7 778 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 LLGL2Q6P1M3 1020 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 C1orf186Q6ZWK4 172 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 SLC5A5Q92911 643 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 VAV3Q9UKW4 847 aa13.15□□□□□ -0.3
HDAC7-230ENST00000552960 WDR91A4D1P6 747 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 KRT15P19012 456 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 FOXN2P32314 431 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 SSTR3P32745 418 aaPredicted RBP13.15□□□□□ -0.31
HDAC7-230ENST00000552960 VAMP7P51809 220 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 HMGCS2P54868 508 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 IRX1P78414 480 aaPredicted RBP13.15□□□□□ -0.31
HDAC7-230ENST00000552960 TNFAIP1Q13829 316 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 MFSD5Q6N075 450 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 MOB2Q70IA6 237 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 ZNF365Q70YC5 407 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 CYFIP1Q7L576 1253 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 C4orf33Q8N1A6 199 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 FAM84AQ96KN4 292 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 CCPG1Q9ULG6 757 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 RIPK3Q9Y572 518 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 ZHX2Q9Y6X8 837 aa13.15□□□□□ -0.31
HDAC7-230ENST00000552960 LTBP3Q9NS15 1303 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 DNAH12Q6ZR08 3092 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 MYH11P35749 1972 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 CBX6O95503 412 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 OAS1P00973 400 aaKnown RBP13.14□□□□□ -0.31
HDAC7-230ENST00000552960 ALAS1P13196 640 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 BRD2P25440 801 aaKnown RBP13.14□□□□□ -0.31
HDAC7-230ENST00000552960 SREBF1P36956 1147 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 SP4Q02446 784 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 AP1ARQ63HQ0 302 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 SNF8Q96H20 258 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 NAF1Q96HR8 494 aaKnown RBP13.14□□□□□ -0.31
HDAC7-230ENST00000552960 CCDC77Q9BR77 488 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 USTQ9Y2C2 406 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 ADM5C9JUS6 153 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 GAS8O95995 478 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 MAPK4P31152 587 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 IL9RQ01113 521 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 STRN3Q13033 797 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 CGB2Q6NT52 195 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 CHURC1Q8WUH1 139 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 DHX38Q92620 1227 aaKnown RBP13.14□□□□□ -0.31
HDAC7-230ENST00000552960 LRRC37BQ96QE4 947 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 NUDCD1Q96RS6 583 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 RPS6KC1Q96S38 1066 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 TMEM109Q9BVC6 243 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 PLVAPQ9BX97 442 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 RPAP3Q9H6T3 665 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-230ENST00000552960 SPON1Q9HCB6 807 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 NINJ2Q9NZG7 142 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 RNF181Q9P0P0 153 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 FRMPD4Q14CM0 1322 aa13.14□□□□□ -0.31
HDAC7-230ENST00000552960 EIF3DO15371 548 aaKnown RBP eCLIP13.13□□□□□ -0.31
HDAC7-230ENST00000552960 PIAS1O75925 651 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 UNC5CO95185 931 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 ARP10275 920 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 MXI1P50539 228 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 MTM1Q13496 603 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 Q4G0T1 1027 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms