RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ACACBO00763 2458 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 K7ERI5 159 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 XYLBO75191 536 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 THP07101 528 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 TGM1P22735 817 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 TARSP26639 723 aaKnown RBP13.03□□□□□ -0.32
GABPB1-206ENST00000543881 HOXA9P31269 272 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 PEX3P56589 373 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 ATP2C1P98194 919 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-206ENST00000543881 DCAF4L1Q3SXM0 396 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 TPRG1Q6ZUI0 275 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 C1orf186Q6ZWK4 172 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 CEP57Q86XR8 500 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 CEP120Q8N960 986 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 LNX1Q8TBB1 728 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-206ENST00000543881 PIK3R5Q8WYR1 880 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 CLDN23Q96B33 292 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 PNMA5Q96PV4 448 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 NELL2Q99435 816 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 TTPALQ9BTX7 342 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 TNFSF13BQ9Y275 285 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 STK24Q9Y6E0 443 aa13.03□□□□□ -0.32
GABPB1-206ENST00000543881 NOTCH4Q99466 2003 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 CCDC169A6NNP5 214 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 SFI1A8K8P3 1242 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 NCAM2O15394 837 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 TBC1D4O60343 1298 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 RPS9P46781 194 aaKnown RBP13.02□□□□□ -0.33
GABPB1-206ENST00000543881 PSMD5Q16401 504 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 RILPL1Q5EBL4 403 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 GLRA4Q5JXX5 417 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 HYIQ5T013 277 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 FAM171A1Q5VUB5 890 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 NPAS3Q8IXF0 933 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 SLC7A14Q8TBB6 771 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 PPP1R10Q96QC0 940 aaKnown RBP13.02□□□□□ -0.33
GABPB1-206ENST00000543881 ACO2Q99798 780 aaKnown RBP13.02□□□□□ -0.33
GABPB1-206ENST00000543881 PTPRHQ9HD43 1115 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 PRMT8Q9NR22 394 aaPredicted RBP13.02□□□□□ -0.33
GABPB1-206ENST00000543881 HCFC1R1Q9NWW0 138 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 ARHGAP28Q9P2N2 729 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 KIF3AQ9Y496 699 aa13.02□□□□□ -0.33
GABPB1-206ENST00000543881 ABLIM1O14639 778 aa13.01□□□□□ -0.33
GABPB1-206ENST00000543881 ADAM12O43184 909 aa13.01□□□□□ -0.33
GABPB1-206ENST00000543881 ZRSR1Q15695 479 aaKnown RBP13.01□□□□□ -0.33
GABPB1-206ENST00000543881 ST3GAL2Q16842 350 aa13.01□□□□□ -0.33
GABPB1-206ENST00000543881 CD300LGQ6UXG3 332 aa13.01□□□□□ -0.33
GABPB1-206ENST00000543881 ZNF852Q6ZMS4 543 aa13.01□□□□□ -0.33
GABPB1-206ENST00000543881 ING5Q8WYH8 240 aa13.01□□□□□ -0.33
GABPB1-206ENST00000543881 PLIN2Q99541 437 aa13.01□□□□□ -0.33
GABPB1-206ENST00000543881 TARS2Q9BW92 718 aaKnown RBP13.01□□□□□ -0.33
GABPB1-206ENST00000543881 CDT1Q9H211 546 aa13.01□□□□□ -0.33
GABPB1-206ENST00000543881 TMEM134Q9H6X4 195 aa13.01□□□□□ -0.33
GABPB1-206ENST00000543881 PARD6AQ9NPB6 346 aa13.01□□□□□ -0.33
GABPB1-206ENST00000543881 GMEB2Q9UKD1 530 aa13.01□□□□□ -0.33
GABPB1-206ENST00000543881 KCNH3Q9ULD8 1083 aa13.01□□□□□ -0.33
GABPB1-206ENST00000543881 PHLPP2Q6ZVD8 1323 aa13.01□□□□□ -0.33
GABPB1-206ENST00000543881 TRIP11Q15643 1979 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 VWA8A3KMH1 1905 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 VWA3AA6NCI4 1184 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 SLC16A4O15374 487 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 MEFVO15553 781 aaPredicted RBP13□□□□□ -0.33
GABPB1-206ENST00000543881 ADRB1P08588 477 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 POU2F2P09086 479 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 GUCY2CP25092 1073 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 GRM5P41594 1212 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 CLCNKBP51801 687 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 OSTNP61366 133 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 ADCY1Q08828 1119 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 RAD51AP2Q09MP3 1159 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 MTAPQ13126 283 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 DMP1Q13316 513 aaPredicted RBP13□□□□□ -0.33
GABPB1-206ENST00000543881 FZD5Q13467 585 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 PABPC1LQ4VXU2 614 aaKnown RBP13□□□□□ -0.33
GABPB1-206ENST00000543881 XKR4Q5GH76 650 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 AXDND1Q5T1B0 1012 aaPredicted RBP13□□□□□ -0.33
GABPB1-206ENST00000543881 ALKAL1Q6UXT8 129 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 TBC1D32Q96NH3 1257 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 FAM126AQ9BYI3 521 aaPredicted RBP13□□□□□ -0.33
GABPB1-206ENST00000543881 GOLGA2P5Q9HBQ8 144 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 KMT5AQ9NQR1 393 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 HEBP1Q9NRV9 189 aa13□□□□□ -0.33
GABPB1-206ENST00000543881 DNMT3BQ9UBC3 853 aaKnown RBP13□□□□□ -0.33
GABPB1-206ENST00000543881 MRPS17Q9Y2R5 130 aaKnown RBP13□□□□□ -0.33
GABPB1-206ENST00000543881 SMIM28A0A1B0GU29 152 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 H3BQV1 296 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 ECI2O75521 394 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 KCNA4P22459 653 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 PROZP22891 400 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 OR1D2P34982 312 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 SLC12A3P55017 1021 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 SOX4Q06945 474 aaPredicted RBP12.99□□□□□ -0.33
GABPB1-206ENST00000543881 UVSSAQ2YD98 709 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 ZNF568Q3ZCX4 644 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 PDXDC1Q6P996 788 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 SYT2Q8N9I0 419 aaPredicted RBP12.99□□□□□ -0.33
GABPB1-206ENST00000543881 C3orf58Q8NDZ4 430 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 LRRC15Q8TF66 581 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 MCRS1Q96EZ8 462 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 ZBTB45Q96K62 511 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms