RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 HEATR9A2RTY3 570 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 RRN3P2A6NIE6 340 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 SYCE1LA8MT33 242 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 FADS2P1A8MWK0 482 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 H0YIV9 168 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 EYA2O00167 538 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 MEFVO15553 781 aaPredicted RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 SMAD6O43541 496 aaKnown RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 NCK2O43639 380 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 KERAO60938 352 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 CLN5O75503 358 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 SLC22A3O75751 556 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 KCNH1O95259 989 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 IFNA14P01570 189 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 LMNAP02545 664 aaKnown RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 ALDH2P05091 517 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 MYCLP12524 364 aaPredicted RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 MYL4P12829 197 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 VAV1P15498 845 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 ALOX12P18054 663 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 LAG3P18627 525 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 ATF6P18850 670 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 RXRAP19793 462 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 HLA-DPA1P20036 260 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 TKTP29401 623 aaKnown RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 HOXA6P31267 233 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 LIFRP42702 1097 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 MAPK8P45983 427 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 HNMTP50135 292 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 CCR3P51677 355 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 RAB14P61106 215 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 ARHGAP4P98171 946 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 GFPT1Q06210 699 aaPredicted RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 FMR1Q06787 632 aaKnown RBP eCLIP6.94□□□□□ -1.3
SDC2-208ENST00000523877 SMARCB1Q12824 385 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 AIMP1Q12904 312 aaKnown RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 GALNT3Q14435 633 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 UBE3CQ15386 1083 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 DPYSL2Q16555 572 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 KLHL38Q2WGJ6 581 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 TUBB8Q3ZCM7 444 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 KMT5BQ4FZB7 885 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 MDH1BQ5I0G3 518 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 RBM20Q5T481 1227 aaKnown RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 DEPDC1Q5TB30 811 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 FAM122CQ6P4D5 195 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 TTC23LQ6PF05 361 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 ZNF574Q6ZN55 896 aaPredicted RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 TMC7Q7Z402 723 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 SLC22A9Q8IVM8 553 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 TRMT2AQ8IZ69 625 aaKnown RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 ATAD1Q8NBU5 361 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 MYCBPAPQ8TBZ2 947 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 ADAMTS18Q8TE60 1221 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 TMA16Q96EY4 203 aaKnown RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 FAM20AQ96MK3 541 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 HINFPQ9BQA5 517 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 BCL7BQ9BQE9 202 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 LLPHQ9BRT6 129 aaKnown RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 TRIM62Q9BVG3 475 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 PACSIN1Q9BY11 444 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 LSG1Q9H089 658 aaKnown RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 MAN1C1Q9NR34 630 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 MRPL39Q9NYK5 338 aaKnown RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 TAS2R7Q9NYW3 318 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 ASIC3Q9UHC3 531 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 DPP7Q9UHL4 492 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 TLK1Q9UKI8 766 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 RCOR1Q9UKL0 485 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 SOX13Q9UN79 622 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 TSC22D4Q9Y3Q8 395 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 TRPV2Q9Y5S1 764 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 ZNF335Q9H4Z2 1342 aaPredicted RBP6.94□□□□□ -1.3
SDC2-208ENST00000523877 ARHGAP31Q2M1Z3 1444 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 PRG4Q92954 1404 aaPredicted RBP6.93□□□□□ -1.3
SDC2-208ENST00000523877 PTPRMP28827 1452 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 VIRMAQ69YN4 1812 aaKnown RBP6.93□□□□□ -1.3
SDC2-208ENST00000523877 FAM196BA6NMK8 535 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 CHURC1-FNTBB4DL54 471 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 USP17L15C9J2P7 530 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 USP17L10C9JJH3 530 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 USP17L13C9JLJ4 530 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 USP17L12C9JPN9 530 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 USP17L11C9JVI0 530 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 USP17L21D6R901 530 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 USP17L18D6R9N7 530 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 USP17L22D6RA61 530 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 USP17L17D6RBQ6 530 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 USP17L19D6RCP7 530 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 USP17L20D6RJB6 530 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 DDX39AO00148 427 aaKnown RBP6.93□□□□□ -1.3
SDC2-208ENST00000523877 IRS4O14654 1257 aaPredicted RBP6.93□□□□□ -1.3
SDC2-208ENST00000523877 CIDEAO60543 219 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 SMPD2O60906 423 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 SRGAP2BP0DMP2 458 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 ZBTB48P10074 688 aaPredicted RBP6.93□□□□□ -1.3
SDC2-208ENST00000523877 HOXA11P31270 313 aaPredicted RBP6.93□□□□□ -1.3
SDC2-208ENST00000523877 DIO1P49895 249 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 RAB15P59190 212 aa6.93□□□□□ -1.3
SDC2-208ENST00000523877 CENPCQ03188 943 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms