RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 GBP6Q6ZN66 633 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 USP37Q86T82 979 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 ZBTB8OSQ8IWT0 167 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 NEK11Q8NG66 645 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 GIPC2Q8TF65 315 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 CPLX3Q8WVH0 158 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 HSH2DQ96JZ2 352 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 MFSD14AQ96MC6 490 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 FAM129BQ96TA1 746 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 AP5M1Q9H0R1 490 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 SUGCTQ9HAC7 445 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 CEP72Q9P209 647 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 SUCLA2Q9P2R7 463 aaPredicted RBP8.32□□□□□ -1.08
CDC42-205ENST00000498236 DNMT3LQ9UJW3 386 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 MYO6Q9UM54 1294 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 PLAGL2Q9UPG8 496 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 USP20Q9Y2K6 914 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 DYRK1BQ9Y463 629 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 THSD7BQ9C0I4 1608 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 NRCAMQ92823 1304 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 A0A0B4J269 797 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 MBLAC1A4D2B0 266 aaPredicted RBP8.31□□□□□ -1.08
CDC42-205ENST00000498236 TISP43B9A030 160 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 TREHO43280 583 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 EXTL3O43909 919 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 MAN1A2O60476 641 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 MSCO60682 206 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 LDHAP00338 332 aaKnown RBP8.31□□□□□ -1.08
CDC42-205ENST00000498236 PDGFAP04085 211 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 ZNF16P17020 682 aaPredicted RBP8.31□□□□□ -1.08
CDC42-205ENST00000498236 KLRC1P26715 233 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 PON1P27169 355 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 GTF2H1P32780 548 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 FMO5P49326 533 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 KLK7P49862 253 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 LIG4P49917 911 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 VAMP7P51809 220 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 GJA9P57773 515 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 PTENP60484 403 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 GOLGA8FQ08AF8 430 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 GOLGA8DPQ0D2H9 430 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 PPFIA1Q13136 1202 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 GRM1Q13255 1194 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 GRIK4Q16099 956 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 SNRNP35Q16560 246 aaKnown RBP8.31□□□□□ -1.08
CDC42-205ENST00000498236 FAM187BQ17R55 369 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 EXOC3L4Q17RC7 722 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 DCAF17Q5H9S7 520 aaPredicted RBP8.31□□□□□ -1.08
CDC42-205ENST00000498236 MARCH8Q5T0T0 291 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 E4F1Q66K89 784 aaPredicted RBP8.31□□□□□ -1.08
CDC42-205ENST00000498236 WDR59Q6PJI9 974 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 MTHFD1LQ6UB35 978 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 GJD3Q8N144 294 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 CCAR2Q8N163 923 aaKnown RBP8.31□□□□□ -1.08
CDC42-205ENST00000498236 GPD1LQ8N335 351 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 RNF149Q8NC42 400 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 TRPV1Q8NER1 839 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 GPR152Q8TDT2 470 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 TRAPPC12Q8WVT3 735 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 POMGNT1Q8WZA1 660 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 TRIB2Q92519 343 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 KAT2BQ92831 832 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 KATNAL1Q9BW62 490 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 MRPL4Q9BYD3 311 aaKnown RBP8.31□□□□□ -1.08
CDC42-205ENST00000498236 ARHGAP39Q9C0H5 1083 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 UPF3AQ9H1J1 476 aaKnown RBP8.31□□□□□ -1.08
CDC42-205ENST00000498236 GANQ9H2C0 597 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 FZD8Q9H461 694 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 MMRN2Q9H8L6 949 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 FAM207AQ9NSI2 230 aaPredicted RBP8.31□□□□□ -1.08
CDC42-205ENST00000498236 AGPAT5Q9NUQ2 364 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 RNF186Q9NXI6 227 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 DMGDHQ9UI17 866 aaKnown RBP8.31□□□□□ -1.08
CDC42-205ENST00000498236 GABRQQ9UN88 632 aa8.31□□□□□ -1.08
CDC42-205ENST00000498236 SMIM35A0A1B0GVV1 85 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 A0A1W2PNR3 127 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 GOLGA6L9A6NEM1 432 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 ACKR2O00590 384 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 EPHB6O15197 1021 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 SEPT4O43236 478 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 ZSCAN12O43309 604 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 TOM1L1O75674 476 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 TBC1D8O95759 1140 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 F11P03951 625 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 TUBB4AP04350 444 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 RPLP1P05386 114 aaKnown RBP8.3□□□□□ -1.08
CDC42-205ENST00000498236 PROZP22891 400 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 YY1P25490 414 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 HOXD10P28358 340 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 HOXC8P31273 242 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 IDH3AP50213 366 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 CLCN3P51790 818 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 ADAM17P78536 824 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 POU5F1Q01860 360 aaKnown RBP8.3□□□□□ -1.08
CDC42-205ENST00000498236 PRKCZQ05513 592 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 CYP24A1Q07973 514 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 CETN1Q12798 172 aa8.3□□□□□ -1.08
CDC42-205ENST00000498236 PCBP1Q15365 356 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDC42-205ENST00000498236 FSCN1Q16658 493 aaKnown RBP8.3□□□□□ -1.08
CDC42-205ENST00000498236 MAPK6Q16659 721 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms