RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 TAS2R40P59535 323 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 SCARA3Q6AZY7 606 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 MCF2L2Q86YR7 1114 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 CCDC63Q8NA47 563 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 SERPINB12Q96P63 405 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 C11orf70Q9BRQ4 267 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 PLVAPQ9BX97 442 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 ANAPC5Q9UJX4 755 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 USTQ9Y2C2 406 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 BRAFP15056 766 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 ATF2P15336 505 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 CD58P19256 250 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 DSG3P32926 999 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 SNRPFP62306 86 aaKnown RBP13.87□□□□□ -0.19
PTPN7-217ENST00000495688 KCNJ2P63252 427 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 PTK6Q13882 451 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 PREPLQ4J6C6 727 aaPredicted RBP13.87□□□□□ -0.19
PTPN7-217ENST00000495688 TAS1R3Q7RTX0 852 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 TMC2Q8TDI7 906 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 BICD1Q96G01 975 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 SLC38A10Q9HBR0 1119 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 GABBR1Q9UBS5 961 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 RIPK3Q9Y572 518 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 PTPRJQ12913 1337 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 ATP6V1G2O95670 118 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 OAS1P00973 400 aaKnown RBP13.86□□□□□ -0.19
PTPN7-217ENST00000495688 ACOT2P49753 483 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 ATP13A4Q4VNC1 1196 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 SRRM1Q8IYB3 904 aaKnown RBP13.86□□□□□ -0.19
PTPN7-217ENST00000495688 GPD1LQ8N335 351 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 MYCBPQ99417 103 aaPredicted RBP13.86□□□□□ -0.19
PTPN7-217ENST00000495688 PXMP2Q9NR77 195 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 UMODL1Q5DID0 1318 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 COL4A5P29400 1685 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 FDX1P10109 184 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 HSPA1LP34931 641 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 SSR1P43307 286 aaKnown RBP13.86□□□□□ -0.19
PTPN7-217ENST00000495688 GCNT1Q02742 428 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 KLF1Q13351 362 aaPredicted RBP13.86□□□□□ -0.19
PTPN7-217ENST00000495688 HP1BP3Q5SSJ5 553 aaPredicted RBP13.86□□□□□ -0.19
PTPN7-217ENST00000495688 TMEM63BQ5T3F8 832 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 GLIS1Q8NBF1 620 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 NSRP1Q9H0G5 558 aaKnown RBP13.86□□□□□ -0.19
PTPN7-217ENST00000495688 NOD2Q9HC29 1040 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 C1orf112Q9NSG2 853 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 PNMA3Q9UL41 463 aa13.86□□□□□ -0.19
PTPN7-217ENST00000495688 USP15Q9Y4E8 981 aaPredicted RBP13.86□□□□□ -0.19
PTPN7-217ENST00000495688 DOCK5Q9H7D0 1870 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 TBC1D12O60347 775 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 GAS8O95995 478 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 TCF4P15884 667 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 NF2P35240 595 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 NSFP46459 744 aaKnown RBP13.85□□□□□ -0.19
PTPN7-217ENST00000495688 JAK3P52333 1124 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 MCCD1P59942 119 aaPredicted RBP13.85□□□□□ -0.19
PTPN7-217ENST00000495688 ARHGEF16Q5VV41 709 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 CYP4F22Q6NT55 531 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 LARGE2Q8N3Y3 721 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 KIF2BQ8N4N8 673 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 ATL2Q8NHH9 583 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 TIPINQ9BVW5 301 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 TRAIPQ9BWF2 469 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 XPNPEP1Q9NQW7 623 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 ANKEF1Q9NU02 776 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 PGAP2Q9UHJ9 254 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 NAALADL1Q9UQQ1 740 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 NEU2Q9Y3R4 380 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 PI4K2BG5E9Z4 385 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 TNNI1P19237 187 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 NLRP11P59045 1033 aaKnown RBP13.85□□□□□ -0.19
PTPN7-217ENST00000495688 WLSQ5T9L3 541 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 SWSAP1Q6NVH7 229 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 MON1BQ7L1V2 547 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 NTPCRQ9BSD7 190 aaKnown RBP13.85□□□□□ -0.19
PTPN7-217ENST00000495688 MOV10L1Q9BXT6 1211 aaKnown RBP13.85□□□□□ -0.19
PTPN7-217ENST00000495688 GEMIN8Q9NWZ8 242 aaKnown RBP13.85□□□□□ -0.19
PTPN7-217ENST00000495688 PCDHB2Q9Y5E7 798 aa13.85□□□□□ -0.19
PTPN7-217ENST00000495688 WDR81Q562E7 1941 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 PROSCO94903 275 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 GSTA1P08263 222 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 KRT10P13645 584 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 NCALDP61601 193 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 KRT76Q01546 638 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 BAATQ14032 418 aaPredicted RBP13.84□□□□□ -0.19
PTPN7-217ENST00000495688 TDRD10Q5VZ19 366 aaKnown RBP13.84□□□□□ -0.19
PTPN7-217ENST00000495688 CGB2Q6NT52 195 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 RMDN2Q96LZ7 410 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 ADAM33Q9BZ11 813 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 AVENQ9NQS1 362 aaPredicted RBP13.84□□□□□ -0.19
PTPN7-217ENST00000495688 TRIM33Q9UPN9 1127 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 L3MBTL1Q9Y468 752 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 PCDHA10Q9Y5I2 948 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 HLA-DRAP01903 254 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 ZSCAN5DPP0CG00 497 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 ACCSLQ4AC99 568 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 ZBTB41Q5SVQ8 909 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 IZUMO3Q5VZ72 239 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 KAZNQ674X7 775 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 TMEM270Q6UE05 265 aa13.84□□□□□ -0.19
PTPN7-217ENST00000495688 C15orf39Q6ZRI6 1047 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms