RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 RAB34Q9BZG1 259 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 SH2B1Q9NRF2 756 aaPredicted RBP9.38□□□□□ -0.91
PRKCB-208ENST00000487674 TOPORSQ9NS56 1045 aaPredicted RBP9.38□□□□□ -0.91
PRKCB-208ENST00000487674 DDX19AQ9NUU7 478 aaKnown RBP9.38□□□□□ -0.91
PRKCB-208ENST00000487674 KIAA1024Q9UPX6 916 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 TNFSF13BQ9Y275 285 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 BACE2Q9Y5Z0 518 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 FANCMQ8IYD8 2048 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 PDCD11Q14690 1871 aaKnown RBP9.37□□□□□ -0.91
PRKCB-208ENST00000487674 K7ERI5 159 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 LAD1O00515 517 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 U2AF2P26368 475 aaKnown RBP eCLIP9.37□□□□□ -0.91
PRKCB-208ENST00000487674 TKTP29401 623 aaKnown RBP9.37□□□□□ -0.91
PRKCB-208ENST00000487674 OR1D2P34982 312 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 GRM5P41594 1212 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 NPTX2P47972 431 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 CLCNKBP51801 687 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 YARSP54577 528 aaKnown RBP9.37□□□□□ -0.91
PRKCB-208ENST00000487674 NTHL1P78549 312 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 DMP1Q13316 513 aaPredicted RBP9.37□□□□□ -0.91
PRKCB-208ENST00000487674 PDIA5Q14554 519 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 NBR1Q14596 966 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 UPP1Q16831 310 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 UVSSAQ2YD98 709 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 PABPC1LQ4VXU2 614 aaKnown RBP9.37□□□□□ -0.91
PRKCB-208ENST00000487674 AXDND1Q5T1B0 1012 aaPredicted RBP9.37□□□□□ -0.91
PRKCB-208ENST00000487674 PARM1Q6UWI2 310 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 Q6ZNB5 142 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 ADSSL1Q8N142 457 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 PJA1Q8NG27 643 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 FGF14Q92915 247 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 SHDQ96IW2 340 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 ZSCAN31Q96LW9 406 aaPredicted RBP9.37□□□□□ -0.91
PRKCB-208ENST00000487674 DRC1Q96MC2 740 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 CCDC94Q9BW85 323 aaPredicted RBP9.37□□□□□ -0.91
PRKCB-208ENST00000487674 MRPL4Q9BYD3 311 aaKnown RBP9.37□□□□□ -0.91
PRKCB-208ENST00000487674 CDT1Q9H211 546 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 SEMA4AQ9H3S1 761 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 SLC38A7Q9NVC3 462 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 DLGAP2Q9P1A6 1054 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 ARHGAP28Q9P2N2 729 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 TSR3Q9UJK0 312 aaKnown RBP9.37□□□□□ -0.91
PRKCB-208ENST00000487674 KCNH3Q9ULD8 1083 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 POLIQ9UNA4 740 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 SIT1Q9Y3P8 196 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 CDY1Q9Y6F8 540 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 NOTCH4Q99466 2003 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 PATJQ8NI35 1801 aa9.37□□□□□ -0.91
PRKCB-208ENST00000487674 DMDP11532 3685 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 SMIM28A0A1B0GU29 152 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 CCDC169A6NNP5 214 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 HIP1RO75146 1068 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 DCNP07585 359 aaKnown RBP9.36□□□□□ -0.91
PRKCB-208ENST00000487674 IGFBP6P24592 240 aaPredicted RBP9.36□□□□□ -0.91
PRKCB-208ENST00000487674 PEX3P56589 373 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 STARD6P59095 220 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 GPC5P78333 572 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 FOXK2Q01167 660 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 ROR1Q01973 937 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 SOX4Q06945 474 aaPredicted RBP9.36□□□□□ -0.91
PRKCB-208ENST00000487674 PTGDRQ13258 359 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 XKR4Q5GH76 650 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 SPECC1Q5M775 1068 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 KRT79Q5XKE5 535 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 SLC8B1Q6J4K2 584 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 ZC3H14Q6PJT7 736 aaKnown RBP9.36□□□□□ -0.91
PRKCB-208ENST00000487674 CD300LGQ6UXG3 332 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 NPAS3Q8IXF0 933 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 DAW1Q8N136 415 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 CEP120Q8N960 986 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 C3orf58Q8NDZ4 430 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 ST13P5Q8NFI4 369 aaPredicted RBP9.36□□□□□ -0.91
PRKCB-208ENST00000487674 ITFG1Q8TB96 612 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 ACO2Q99798 780 aaKnown RBP9.36□□□□□ -0.91
PRKCB-208ENST00000487674 RPP25Q9BUL9 199 aaKnown RBP9.36□□□□□ -0.91
PRKCB-208ENST00000487674 FOXQ1Q9C009 403 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 TMEM134Q9H6X4 195 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 C17orf75Q9HAS0 396 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 GOLGA2P5Q9HBQ8 144 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 POLD4Q9HCU8 107 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 PTPRHQ9HD43 1115 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 KMT5AQ9NQR1 393 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 DNM3Q9UQ16 869 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 RBM19Q9Y4C8 960 aaKnown RBP9.36□□□□□ -0.91
PRKCB-208ENST00000487674 EP300Q09472 2414 aaPredicted RBP9.36□□□□□ -0.91
PRKCB-208ENST00000487674 VPS13AQ96RL7 3174 aa9.36□□□□□ -0.91
PRKCB-208ENST00000487674 MYH11P35749 1972 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 ARHGEF37A1IGU5 675 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 E9PMD0 336 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 I3L4J1 428 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 PODXLO00592 558 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 ABLIM1O14639 778 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 SYN3O14994 580 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 LMNAP02545 664 aaKnown RBP9.35□□□□□ -0.91
PRKCB-208ENST00000487674 MCF2P10911 925 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 KCNE1P15382 129 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 PROZP22891 400 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 PRPHP41219 470 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 BRCC3P46736 316 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 TOB1P50616 345 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms