RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 LILRB3O75022 631 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 PAX3P23760 479 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 NRIP1P48552 1158 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 GLUD2P49448 558 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 DSG1Q02413 1049 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 SPAG1Q07617 926 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 ADAM15Q13444 863 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 MYBPC2Q14324 1141 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 SURF1Q15526 300 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 ZNF658Q5TYW1 1059 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-206ENST00000439717 KIAA0319Q5VV43 1072 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 SPATA1Q5VX52 437 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 JADE1Q6IE81 842 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 KIAA1841Q6NSI8 718 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 TAS1R1Q7RTX1 841 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 XXYLT1Q8NBI6 393 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 EMILIN2Q9BXX0 1053 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 KCTD10Q9H3F6 313 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 PCDHA5Q9Y5H7 936 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 REV3LO60673 3130 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 CLIC2O15247 247 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 CALUO43852 315 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-206ENST00000439717 NFICP08651 508 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 SRGAP2BP0DMP2 458 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 CA8P35219 290 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 CREMQ03060 361 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 AAK1Q2M2I8 961 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 COBLL1Q53SF7 1204 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 FAM171A1Q5VUB5 890 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 PDXDC1Q6P996 788 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 CD300LGQ6UXG3 332 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-206ENST00000439717 RBM23Q86U06 439 aaKnown RBP12.81□□□□□ -0.36
HSPG2-206ENST00000439717 PPFIBP1Q86W92 1011 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 SLC9A9Q8IVB4 645 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 ZSWIM2Q8NEG5 633 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 HASPINQ8TF76 798 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 CACTINQ8WUQ7 758 aaKnown RBP12.81□□□□□ -0.36
HSPG2-206ENST00000439717 ATXN2LQ8WWM7 1075 aaKnown RBP12.81□□□□□ -0.36
HSPG2-206ENST00000439717 AUTS2Q8WXX7 1259 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 TTPALQ9BTX7 342 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 IGFLR1Q9H665 355 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 UBE2ZQ9H832 354 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-206ENST00000439717 RXFP1Q9HBX9 757 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.81□□□□□ -0.36
HSPG2-206ENST00000439717 TRAF3IP3Q9Y228 551 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 NUB1Q9Y5A7 615 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 TRIP11Q15643 1979 aa12.81□□□□□ -0.36
HSPG2-206ENST00000439717 PDCD11Q14690 1871 aaKnown RBP12.8□□□□□ -0.36
HSPG2-206ENST00000439717 PER2O15055 1255 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 CLASP2O75122 1294 aaKnown RBP12.8□□□□□ -0.36
HSPG2-206ENST00000439717 C1RP00736 705 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 GTF2F1P35269 517 aaKnown RBP eCLIP12.8□□□□□ -0.36
HSPG2-206ENST00000439717 CYP2J2P51589 502 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 SNRNP35Q16560 246 aaKnown RBP12.8□□□□□ -0.36
HSPG2-206ENST00000439717 NFIL3Q16649 462 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 TMEM184AQ6ZMB5 413 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 CBWD2Q8IUF1 395 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.8□□□□□ -0.36
HSPG2-206ENST00000439717 EFCAB13Q8IY85 973 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 C3orf58Q8NDZ4 430 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 NOC3LQ8WTT2 800 aaKnown RBP12.8□□□□□ -0.36
HSPG2-206ENST00000439717 PIK3R5Q8WYR1 880 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 SUSD3Q96L08 255 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 KLHL5Q96PQ7 755 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 PRDM6Q9NQX0 595 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 DMAC2Q9NW81 257 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 DPP3Q9NY33 737 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 CLDND1Q9NY35 253 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 FNIP2Q9P278 1114 aa12.8□□□□□ -0.36
HSPG2-206ENST00000439717 ANO9A1A5B4 782 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 GOLGA6L22H0YM25 854 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 PIRO00625 290 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 C2CD2LO14523 706 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 SYN3O14994 580 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 EXOC3O60645 756 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 NR3C1P04150 777 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 CNPP09543 421 aaKnown RBP12.79□□□□□ -0.36
HSPG2-206ENST00000439717 FGFR3P22607 806 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 IGFBP6P24592 240 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-206ENST00000439717 RPL13P26373 211 aaKnown RBP12.79□□□□□ -0.36
HSPG2-206ENST00000439717 PPP1R2P41236 205 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 MRPS5P82675 430 aaKnown RBP12.79□□□□□ -0.36
HSPG2-206ENST00000439717 KCNC3Q14003 757 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 RTP2Q5QGT7 225 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 C9orf57Q5W0N0 161 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 RIN2Q8WYP3 895 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-206ENST00000439717 MFSD14AQ96MC6 490 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 PDE11AQ9HCR9 933 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 LMBRD1Q9NUN5 540 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 MAN1B1Q9UKM7 699 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 MAPK8IP1Q9UQF2 711 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 PRUNE2Q8WUY3 3088 aa12.79□□□□□ -0.36
HSPG2-206ENST00000439717 TEX28O15482 410 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 LINC01565O15544 149 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 GLP2RO95838 553 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 ADH1AP07327 375 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 KCNA5P22460 613 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 KLRC2P26717 231 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 MCM4P33991 863 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms