RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 SEPT11Q9NVA2 429 aaKnown RBP14.82□□□□□ -0.04
PTPRF-202ENST00000372405 GRID2IPA4D2P6 1211 aa14.81□□□□□ -0.04
PTPRF-202ENST00000372405 NCK2O43639 380 aa14.81□□□□□ -0.04
PTPRF-202ENST00000372405 IL18RAPO95256 599 aa14.81□□□□□ -0.04
PTPRF-202ENST00000372405 UBR7Q8N806 425 aa14.81□□□□□ -0.04
PTPRF-202ENST00000372405 CXorf38Q8TB03 319 aa14.81□□□□□ -0.04
PTPRF-202ENST00000372405 FAM81BQ96LP2 452 aa14.81□□□□□ -0.04
PTPRF-202ENST00000372405 ALS2CR12Q96Q35 445 aa14.81□□□□□ -0.04
PTPRF-202ENST00000372405 XYLT2Q9H1B5 865 aa14.81□□□□□ -0.04
PTPRF-202ENST00000372405 SIX4Q9UIU6 781 aa14.81□□□□□ -0.04
PTPRF-202ENST00000372405 SAR1BQ9Y6B6 198 aa14.81□□□□□ -0.04
PTPRF-202ENST00000372405 RALGAPA2Q2PPJ7 1873 aa14.81□□□□□ -0.04
PTPRF-202ENST00000372405 RARBP10826 455 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 KRT5P13647 590 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 PRKAR2AP13861 404 aaKnown RBP14.8□□□□□ -0.04
PTPRF-202ENST00000372405 EIF4BP23588 611 aaKnown RBP14.8□□□□□ -0.04
PTPRF-202ENST00000372405 NAP1L1P55209 391 aaKnown RBP14.8□□□□□ -0.04
PTPRF-202ENST00000372405 CDC42EP1Q00587 391 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 CDR2Q01850 454 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 TUBB2AQ13885 445 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 ERCC6LQ2NKX8 1250 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 JADE1Q6IE81 842 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 C7orf31Q8N865 590 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 MNS1Q8NEH6 495 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 CD99L2Q8TCZ2 262 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 ARHGEF26Q96DR7 871 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 MTG1Q9BT17 334 aaPredicted RBP14.8□□□□□ -0.04
PTPRF-202ENST00000372405 TUBB2BQ9BVA1 445 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 TLR10Q9BXR5 811 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 ISCUQ9H1K1 167 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 CXCL16Q9H2A7 254 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 CNTN6Q9UQ52 1028 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 CEP350Q5VT06 3117 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 NCANO14594 1321 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 A0A0A6YYK5 440 aaPredicted RBP14.8□□□□□ -0.04
PTPRF-202ENST00000372405 KPNA6O60684 536 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 TMEM191BP0C7N4 346 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 TMEM253P0C7T8 217 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 ABCB4P21439 1286 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 PDE6CP51160 858 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 POU5F1Q01860 360 aaKnown RBP14.8□□□□□ -0.04
PTPRF-202ENST00000372405 SNX17Q15036 470 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 ELF2Q15723 593 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 NBPF20Q3BBV1 942 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 CATSPER4Q7RTX7 472 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 C1orf127Q8N9H9 656 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 LRRC57Q8N9N7 239 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 EIF2AQ9BY44 585 aaKnown RBP14.8□□□□□ -0.04
PTPRF-202ENST00000372405 THAP2Q9H0W7 228 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 GOLPH3Q9H4A6 298 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 SRRDQ9UH36 339 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 PUF60Q9UHX1 559 aaKnown RBP14.8□□□□□ -0.04
PTPRF-202ENST00000372405 SNX12Q9UMY4 172 aa14.8□□□□□ -0.04
PTPRF-202ENST00000372405 ZNF185O15231 689 aa14.79□□□□□ -0.04
PTPRF-202ENST00000372405 NPTXRO95502 500 aa14.79□□□□□ -0.04
PTPRF-202ENST00000372405 WHAMMP3Q1A5X7 153 aa14.79□□□□□ -0.04
PTPRF-202ENST00000372405 RSRC2Q7L4I2 434 aaKnown RBP14.79□□□□□ -0.04
PTPRF-202ENST00000372405 ANKRD7Q92527 254 aa14.79□□□□□ -0.04
PTPRF-202ENST00000372405 ANKRD36BP1Q96IX9 119 aa14.79□□□□□ -0.04
PTPRF-202ENST00000372405 OSGEPQ9NPF4 335 aa14.79□□□□□ -0.04
PTPRF-202ENST00000372405 XPNPEP3Q9NQH7 507 aa14.79□□□□□ -0.04
PTPRF-202ENST00000372405 GTF2IRD1Q9UHL9 959 aa14.79□□□□□ -0.04
PTPRF-202ENST00000372405 MROH7Q68CQ1 1323 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 ANKRD62A6NC57 917 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 EFCAB8A8MWE9 144 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 FTCDO95954 541 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 TNNC2P02585 160 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 FTLP02792 175 aaPredicted RBP14.78□□□□□ -0.04
PTPRF-202ENST00000372405 TBXAS1P24557 533 aaPredicted RBP14.78□□□□□ -0.04
PTPRF-202ENST00000372405 GRM5P41594 1212 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 VEGFBP49765 207 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 HTRA3P83110 453 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 SGSM1Q2NKQ1 1148 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 CCSAPQ6IQ19 270 aaPredicted RBP14.78□□□□□ -0.04
PTPRF-202ENST00000372405 GDF6Q6KF10 455 aaPredicted RBP14.78□□□□□ -0.04
PTPRF-202ENST00000372405 KLHDC9Q8NEP7 349 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 TPCN2Q8NHX9 752 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 WNT8BQ93098 351 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 ADPGKQ9BRR6 497 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 ASB7Q9H672 318 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 PDCD11Q14690 1871 aaKnown RBP14.78□□□□□ -0.04
PTPRF-202ENST00000372405 PDE2AO00408 941 aaPredicted RBP14.78□□□□□ -0.04
PTPRF-202ENST00000372405 GNAT1P11488 350 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 GZMAP12544 262 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 ZNF132P52740 706 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 KYAT1Q16773 422 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 MAP3K21Q5TCX8 1036 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 MEI1Q5TIA1 1274 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 SLC27A1Q6PCB7 646 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 TMEM270Q6UE05 265 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 SLC35G2Q8TBE7 412 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 COG1Q8WTW3 980 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 RFFLQ8WZ73 363 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 ACAP3Q96P50 834 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 IMPG2Q9BZV3 1241 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 NIF3L1Q9GZT8 377 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 PACSIN2Q9UNF0 486 aaPredicted RBP14.78□□□□□ -0.04
PTPRF-202ENST00000372405 COG5Q9UP83 839 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 HES2Q9Y543 173 aa14.78□□□□□ -0.04
PTPRF-202ENST00000372405 PCDHB4Q9Y5E5 795 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms