RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 CLTBP09497 229 aa7.46□□□□□ -1.21
RAB5B-201ENST00000360299 TGFB3P10600 412 aa7.46□□□□□ -1.21
RAB5B-201ENST00000360299 UCHL3P15374 230 aa7.46□□□□□ -1.21
RAB5B-201ENST00000360299 GNGT1P63211 74 aa7.46□□□□□ -1.21
RAB5B-201ENST00000360299 GFPT1Q06210 699 aaPredicted RBP7.46□□□□□ -1.21
RAB5B-201ENST00000360299 DHX9Q08211 1270 aaKnown RBP7.46□□□□□ -1.21
RAB5B-201ENST00000360299 ASPHQ12797 758 aa7.46□□□□□ -1.21
RAB5B-201ENST00000360299 ARHGEF18Q6ZSZ5 1173 aa7.46□□□□□ -1.21
RAB5B-201ENST00000360299 CENPUQ71F23 418 aa7.46□□□□□ -1.21
RAB5B-201ENST00000360299 ZNF677Q86XU0 584 aa7.46□□□□□ -1.21
RAB5B-201ENST00000360299 TMEM8AQ9HCN3 771 aa7.46□□□□□ -1.21
RAB5B-201ENST00000360299 IL17RBQ9NRM6 502 aa7.46□□□□□ -1.21
RAB5B-201ENST00000360299 KLK14Q9P0G3 267 aa7.46□□□□□ -1.21
RAB5B-201ENST00000360299 INTUQ9ULD6 942 aa7.46□□□□□ -1.21
RAB5B-201ENST00000360299 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.46□□□□□ -1.22
RAB5B-201ENST00000360299 IGF2BP3O00425 579 aaKnown RBP eCLIP7.46□□□□□ -1.22
RAB5B-201ENST00000360299 TRIM49P0CI25 452 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 TRIM49CP0CI26 452 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 MAPTP10636 758 aaKnown RBP7.46□□□□□ -1.22
RAB5B-201ENST00000360299 ATP11AP98196 1134 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 GRB10Q13322 594 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 PPP2R5DQ14738 602 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 SNRNP35Q16560 246 aaKnown RBP7.46□□□□□ -1.22
RAB5B-201ENST00000360299 C6orf118Q5T5N4 469 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 METTL7BQ6UX53 244 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 STMN2Q93045 179 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.46□□□□□ -1.228e-8■■■□□ 15.3
RAB5B-201ENST00000360299 ARHGAP39Q9C0H5 1083 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 PARVAQ9NVD7 372 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 DPP7Q9UHL4 492 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 PTPN22Q9Y2R2 807 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 MAD1L1Q9Y6D9 718 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 C4BP0C0L5 1744 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 NPTXRO95502 500 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 ZBED1O96006 694 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 CCND3P30281 292 aaPredicted RBP7.46□□□□□ -1.22
RAB5B-201ENST00000360299 SDC4P31431 198 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 KPNA2P52292 529 aaKnown RBP7.46□□□□□ -1.22
RAB5B-201ENST00000360299 COG7P83436 770 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 C2orf54Q08AI8 447 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 NBPF20Q3BBV1 942 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 CYP4A22Q5TCH4 519 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 TRAPPC11Q7Z392 1133 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 CCNYQ8ND76 341 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 OSBPL9Q96SU4 736 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 PDE11AQ9HCR9 933 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 CYP26B1Q9NR63 512 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 MID2Q9UJV3 735 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 GABRQQ9UN88 632 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 ZFXP17010 805 aaPredicted RBP7.46□□□□□ -1.22
RAB5B-201ENST00000360299 IRX5P78411 483 aaPredicted RBP7.46□□□□□ -1.22
RAB5B-201ENST00000360299 ADCY2Q08462 1091 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 MAP7Q14244 749 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 ARHGAP15Q53QZ3 475 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 C4orf19Q8IY42 314 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 TTC1Q99614 292 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 EMILIN2Q9BXX0 1053 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 SYNDIG1Q9H7V2 258 aa7.46□□□□□ -1.22
RAB5B-201ENST00000360299 NGRNQ9NPE2 291 aaKnown RBP7.46□□□□□ -1.22
RAB5B-201ENST00000360299 EXTL3O43909 919 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 CD4P01730 458 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 ITKQ08881 620 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 MGAT5BQ3V5L5 792 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 NOTUMQ6P988 496 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 C7orf43Q8WVR3 580 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 SENP7Q9BQF6 1050 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 INTS9Q9NV88 658 aaKnown RBP7.45□□□□□ -1.22
RAB5B-201ENST00000360299 SEPT10Q9P0V9 454 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 RAB23Q9ULC3 237 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 FAN1Q9Y2M0 1017 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 ATP8A1Q9Y2Q0 1164 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 PCDHB2Q9Y5E7 798 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 GOLGA8QA0A0J9YX86 632 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 TARSL2A2RTX5 802 aaKnown RBP7.45□□□□□ -1.22
RAB5B-201ENST00000360299 KLRG2A4D1S0 409 aaPredicted RBP7.45□□□□□ -1.22
RAB5B-201ENST00000360299 GOLGA8OA6NCC3 632 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 HMGB1P1B2RPK0 211 aaPredicted RBP7.45□□□□□ -1.22
RAB5B-201ENST00000360299 GOLGA8NF8WBI6 632 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 SLC37A4O43826 429 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 CPP00450 1065 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 NFKBIAP25963 317 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 GTF2H1P32780 548 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 MSH2P43246 934 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 ALDH1A3P47895 512 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 SHROOM1Q2M3G4 852 aaPredicted RBP7.45□□□□□ -1.22
RAB5B-201ENST00000360299 ZNF484Q5JVG2 852 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 TAF2Q6P1X5 1199 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 ANKRD42Q8N9B4 389 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 DHX38Q92620 1227 aaKnown RBP7.45□□□□□ -1.22
RAB5B-201ENST00000360299 PDCD2LQ9BRP1 358 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 C11orf70Q9BRQ4 267 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 NUP85Q9BW27 656 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 KLC2Q9H0B6 622 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 PLEKHA4Q9H4M7 779 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 DBR1Q9UK59 544 aaKnown RBP7.45□□□□□ -1.22
RAB5B-201ENST00000360299 INSRRP14616 1297 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 ZNF18P17022 549 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 BCAR1P56945 870 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 NR1H3Q13133 447 aa7.45□□□□□ -1.22
RAB5B-201ENST00000360299 CENPPQ6IPU0 288 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms