RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 EIF3EP60228 445 aaKnown RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 USP17L2Q6R6M4 530 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 KCNA2P16389 499 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 GNA15P30679 374 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 VCPP55072 806 aaKnown RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 MECOMQ03112 1051 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 SLC29A2Q14542 456 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 PLEKHM3Q6ZWE6 761 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 DDIASQ8IXT1 998 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 SENP7Q9BQF6 1050 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 TNFAIP8O95379 198 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 THRAP10827 490 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 ROR2Q01974 943 aaKnown RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 CCDC85BQ15834 202 aaPredicted RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 TMEM245Q9H330 911 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 GGT7Q9UJ14 662 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 APPL1Q9UKG1 709 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 AIM2O14862 343 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 LZTS3O60299 673 aaPredicted RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 KIF28PB7ZC32 967 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 TM9SF1O15321 606 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 GSNP06396 782 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 YY1P25490 414 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 SPRP35270 261 aaPredicted RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 PLOD1Q02809 727 aaPredicted RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 USPL1Q5W0Q7 1092 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 ZFP1Q6P2D0 407 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 ENGASEQ8NFI3 743 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 CASKIN2Q8WXE0 1202 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 COA7Q96BR5 231 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 C19orf60Q96EN9 201 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 TMA16Q96EY4 203 aaKnown RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 HERC5Q9UII4 1024 aaKnown RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 RPL26L1Q9UNX3 145 aaKnown RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 C4orf33Q8N1A6 199 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 MIEF2Q96C03 454 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 RBBP8Q99708 897 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 C20orf96Q9NUD7 363 aaPredicted RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 POTEFA5A3E0 1075 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 POTEIP0CG38 1075 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 CTTNQ14247 550 aaKnown RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 POTEEQ6S8J3 1075 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 PCDHGB4Q9UN71 923 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 ENO3P13929 434 aaPredicted RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 POU5F1BQ06416 359 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 GRM1Q13255 1194 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 EFHC2Q5JST6 749 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 ARHGEF26Q96DR7 871 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 KRT76Q01546 638 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 TJAP1Q5JTD0 557 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 HABP4Q5JVS0 413 aaKnown RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 TUBGCP4Q9UGJ1 667 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 MAD2L2Q9UI95 211 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 H0YIN7 160 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 USP1O94782 785 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 TOMM70O94826 608 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 FAM58BPP0C7Q3 252 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 COILP38432 576 aaPredicted RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 NFIBO00712 420 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 PSTPIP1O43586 416 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 MCAMP43121 646 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 CALML6Q8TD86 181 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 CABLES1Q8TDN4 633 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 PALLDQ8WX93 1383 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 CLDN3O15551 220 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 CLASP2O75122 1294 aaKnown RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 TRIM54Q9BYV2 358 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 PHTF1Q9UMS5 762 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 SOX13Q9UN79 622 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 H7C1W4 665 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 CDH6P55285 790 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 BTKQ06187 659 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 RWDD4Q6NW29 188 aaKnown RBP8.62□□□□□ -1.03
APOB-201ENST00000233242 COQ7Q99807 217 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 PI4KBQ9UBF8 816 aa8.62□□□□□ -1.03
APOB-201ENST00000233242 CES2O00748 559 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 CDK8P49336 464 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 TMC5Q6UXY8 1006 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 TAGAPQ8N103 731 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 RFWD2Q8NHY2 731 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 CORO1CQ9ULV4 474 aaPredicted RBP8.61□□□□□ -1.03
APOB-201ENST00000233242 ITGA8P53708 1063 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 KCTD1Q719H9 257 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 KRT27Q7Z3Y8 459 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 ZNF677Q86XU0 584 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 PPIL6Q8IXY8 311 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 FAM193BQ96PV7 902 aaPredicted RBP8.61□□□□□ -1.03
APOB-201ENST00000233242 ZNF184Q99676 751 aaPredicted RBP8.61□□□□□ -1.03
APOB-201ENST00000233242 FOXN1O15353 648 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 VCAM1P19320 739 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 PAX7P23759 505 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 COPB2P35606 906 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 STAT3P40763 770 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 CDO1Q16878 200 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 C3orf62Q6ZUJ4 267 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 ILKAPQ9H0C8 392 aaPredicted RBP8.61□□□□□ -1.03
APOB-201ENST00000233242 ANKZF1Q9H8Y5 726 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 TUFT1Q9NNX1 390 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 AGPAT5Q9NUQ2 364 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 POLD1P28340 1107 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms