RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 HPA3P39979 161 aa-1.85□□□□□ -2.71
snR47snR47 SER33P40510 469 aa-1.85□□□□□ -2.71
snR47snR47 FIS1P40515 155 aa-1.85□□□□□ -2.71
snR47snR47 RPL4BP49626 362 aaKnown RBP-1.85□□□□□ -2.71
snR47snR47 YGL034CP53186 121 aa-1.85□□□□□ -2.71
snR47snR47 SPG3Q04398 127 aaPredicted RBP-1.85□□□□□ -2.71
snR47snR47 SEN15Q04675 128 aa-1.85□□□□□ -2.71
snR47snR47 UPS1Q05776 175 aa-1.85□□□□□ -2.71
snR47snR47 APC9Q12107 265 aa-1.85□□□□□ -2.71
snR47snR47 MYO1P08964 1928 aa-1.85□□□□□ -2.71
snR47snR47 FAS2P19097 1887 aaKnown RBP-1.86□□□□□ -2.71
snR47snR47 SEC11P15367 167 aa-1.86□□□□□ -2.71
snR47snR47 UBA1P22515 1024 aaKnown RBP-1.86□□□□□ -2.71
snR47snR47 ERG24P32462 438 aaKnown RBP-1.86□□□□□ -2.71
snR47snR47 YKL162CP36052 402 aa-1.86□□□□□ -2.71
snR47snR47 RPC37P36121 282 aa-1.86□□□□□ -2.71
snR47snR47 FZO1P38297 855 aa-1.86□□□□□ -2.71
snR47snR47 HIS2P38635 335 aa-1.86□□□□□ -2.71
snR47snR47 DOG2P38773 246 aa-1.86□□□□□ -2.71
snR47snR47 VMA22P38784 181 aa-1.86□□□□□ -2.71
snR47snR47 YMR141CP40211 102 aa-1.86□□□□□ -2.71
snR47snR47 YGL159WP53110 370 aa-1.86□□□□□ -2.71
snR47snR47 YGR168CP53293 376 aa-1.86□□□□□ -2.71
snR47snR47 ATG39Q06159 398 aa-1.86□□□□□ -2.71
snR47snR47 YLR179CQ06252 201 aaKnown RBP-1.86□□□□□ -2.71
snR47snR47 YDR262WQ12331 272 aa-1.86□□□□□ -2.71
snR47snR47 SPO24Q3E752 67 aa-1.86□□□□□ -2.71
snR47snR47 YBL008W-AQ3E821 79 aa-1.86□□□□□ -2.71
snR47snR47 YFR032C-BQ8TGU2 87 aa-1.86□□□□□ -2.71
snR47snR47 YOS9Q99220 542 aa-1.86□□□□□ -2.71
snR47snR47 SIR2P06700 562 aa-1.87□□□□□ -2.71
snR47snR47 SPO13P23624 291 aa-1.87□□□□□ -2.71
snR47snR47 YCR001WP25347 104 aa-1.87□□□□□ -2.71
snR47snR47 DAL80P26343 269 aa-1.87□□□□□ -2.71
snR47snR47 YJR015WP47090 510 aa-1.87□□□□□ -2.71
snR47snR47 SEC10Q06245 871 aa-1.87□□□□□ -2.71
snR47snR47 TSR2Q06672 205 aaKnown RBP-1.87□□□□□ -2.71
snR47snR47 GSC2P40989 1895 aa-1.88□□□□□ -2.71
snR47snR47 YJR056CP47115 236 aa-1.88□□□□□ -2.71
snR47snR47 YRA1Q12159 226 aaKnown RBP-1.88□□□□□ -2.71
snR47snR47 CDC8P00572 216 aa-1.89□□□□□ -2.71
snR47snR47 RPT5P33297 434 aaKnown RBP-1.89□□□□□ -2.71
snR47snR47 YKL063CP35725 167 aa-1.89□□□□□ -2.71
snR47snR47 YPT52P36018 234 aaKnown RBP-1.89□□□□□ -2.71
snR47snR47 MRX3P38172 270 aa-1.89□□□□□ -2.71
snR47snR47 RSM25P40496 264 aa-1.89□□□□□ -2.71
snR47snR47 NBP35P52920 328 aa-1.89□□□□□ -2.71
snR47snR47 RMR1P53060 241 aa-1.89□□□□□ -2.71
snR47snR47 PBP4Q07362 185 aaKnown RBP-1.89□□□□□ -2.71
snR47snR47 APE4P38821 490 aa-1.9□□□□□ -2.71
snR47snR47 SWS2P53937 143 aa-1.9□□□□□ -2.71
snR47snR47 ALG11P53954 548 aaKnown RBP-1.9□□□□□ -2.71
snR47snR47 YPL077CQ02831 240 aa-1.9□□□□□ -2.71
snR47snR47 DBP9Q06218 594 aaKnown RBP-1.9□□□□□ -2.71
snR47snR47 FYV12Q08559 129 aa-1.9□□□□□ -2.71
snR47snR47 ATG40Q99325 256 aa-1.9□□□□□ -2.71
snR47snR47 FAS1P07149 2051 aaKnown RBP-1.9□□□□□ -2.71
snR47snR47 SWI1P09547 1314 aa-1.91□□□□□ -2.71
snR47snR47 YLR236CA0A023PZG4 107 aa-1.91□□□□□ -2.72
snR47snR47 DBF2P22204 572 aa-1.91□□□□□ -2.72
snR47snR47 RPA43P46669 326 aa-1.91□□□□□ -2.72
snR47snR47 FIT1Q04433 528 aa-1.91□□□□□ -2.72
snR47snR47 FUR1P18562 216 aaKnown RBP-1.92□□□□□ -2.72
snR47snR47 RPB7P34087 171 aa-1.92□□□□□ -2.72
snR47snR47 HEK2P38199 381 aaKnown RBP RIP-Chip data-1.92□□□□□ -2.72not detected
snR47snR47 ECM33P38248 429 aaKnown RBP-1.92□□□□□ -2.72
snR47snR47 UMP1P38293 148 aa-1.92□□□□□ -2.72
snR47snR47 GDT1P38301 280 aaPredicted RBP-1.92□□□□□ -2.72
snR47snR47 RPA34P47006 233 aaPredicted RBP-1.92□□□□□ -2.72
snR47snR47 YNL146WP53906 100 aa-1.92□□□□□ -2.72
snR47snR47 ABZ2Q03266 374 aa-1.92□□□□□ -2.72
snR47snR47 CUE4Q04201 117 aaPredicted RBP-1.92□□□□□ -2.72
snR47snR47 RAD28Q12021 506 aa-1.92□□□□□ -2.72
snR47snR47 FSF1Q12029 327 aaKnown RBP-1.92□□□□□ -2.72
snR47snR47 ERP4Q12450 207 aa-1.92□□□□□ -2.72
snR47snR47 ATP6P00854 259 aa-1.93□□□□□ -2.72
snR47snR47 QRI5P32344 111 aa-1.93□□□□□ -2.72
snR47snR47 SHE2P36068 246 aaKnown RBP RIP-Chip data-1.93□□□□□ -2.72not detected
snR47snR47 YER034WP40022 185 aaKnown RBP-1.93□□□□□ -2.72
snR47snR47 SOL1P50278 321 aa-1.93□□□□□ -2.72
snR47snR47 SXM1Q04175 944 aaKnown RBP-1.93□□□□□ -2.72
snR47snR47 TRM12Q04235 462 aa-1.93□□□□□ -2.72
snR47snR47 ELP6Q04868 273 aa-1.93□□□□□ -2.72
snR47snR47 YMR226CQ05016 267 aaKnown RBP-1.93□□□□□ -2.72
snR47snR47 YPR172WQ06608 200 aa-1.93□□□□□ -2.72
snR47snR47 YPL257WQ08974 193 aa-1.93□□□□□ -2.72
snR47snR47 TFB5Q3E7C1 72 aaPredicted RBP-1.93□□□□□ -2.72
snR47snR47 BNI1P41832 1953 aa-1.94□□□□□ -2.72
snR47snR47 RPL6BP05739 176 aaKnown RBP-1.94□□□□□ -2.72
snR47snR47 RPL18AP0CX49 186 aaKnown RBP-1.94□□□□□ -2.72
snR47snR47 RPL18BP0CX50 186 aaKnown RBP-1.94□□□□□ -2.72
snR47snR47 POT1P27796 417 aaKnown RBP RIP-Chip data-1.94□□□□□ -2.72not detected
snR47snR47 SWD2P36104 329 aaPredicted RBP-1.94□□□□□ -2.72
snR47snR47 MNN9P39107 395 aaKnown RBP-1.94□□□□□ -2.72
snR47snR47 YAR068WP39564 161 aa-1.94□□□□□ -2.72
snR47snR47 JEM1P40358 645 aa-1.94□□□□□ -2.72
snR47snR47 YIA6P40556 373 aa-1.94□□□□□ -2.72
snR47snR47 GTO1P48239 356 aa-1.94□□□□□ -2.72
snR47snR47 RPL6AQ02326 176 aaKnown RBP-1.94□□□□□ -2.72
snR47snR47 YDR124WQ04608 324 aa-1.94□□□□□ -2.72
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms