RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C TIM11P81449 96 aaPredicted RBP1.57□□□□□ -2.16
ATG11YPR049C BTS1Q12051 335 aa1.57□□□□□ -2.16
ATG11YPR049C BBP1Q12365 385 aa1.57□□□□□ -2.16
ATG11YPR049C PPA2P28239 310 aa1.56□□□□□ -2.16
ATG11YPR049C MRE11P32829 692 aa1.56□□□□□ -2.16
ATG11YPR049C IST2P38250 946 aa1.56□□□□□ -2.16
ATG11YPR049C SUR2P38992 349 aa1.56□□□□□ -2.16
ATG11YPR049C RIO2P40160 425 aaKnown RBP1.56□□□□□ -2.16
ATG11YPR049C YJL213WP40896 331 aa1.56□□□□□ -2.16
ATG11YPR049C YJL055WP47044 245 aa1.56□□□□□ -2.16
ATG11YPR049C ERG25P53045 309 aa1.56□□□□□ -2.16
ATG11YPR049C YGL114WP53134 725 aa1.56□□□□□ -2.16
ATG11YPR049C RSM27P53305 110 aa1.56□□□□□ -2.16
ATG11YPR049C EOS1P53938 366 aa1.56□□□□□ -2.16
ATG11YPR049C MCT1Q12283 360 aa1.56□□□□□ -2.16
ATG11YPR049C SCM3Q12334 223 aa1.56□□□□□ -2.16
ATG11YPR049C LSO2Q3E772 92 aaKnown RBP1.56□□□□□ -2.16
ATG11YPR049C YPL229WQ99395 206 aa1.56□□□□□ -2.16
ATG11YPR049C HHF1P02309 103 aaKnown RBP1.56□□□□□ -2.16
ATG11YPR049C THI2P38141 450 aa1.56□□□□□ -2.16
ATG11YPR049C MPC2P38857 129 aa1.56□□□□□ -2.16
ATG11YPR049C MPM1P40364 252 aa1.56□□□□□ -2.16
ATG11YPR049C TDA10P42938 290 aa1.56□□□□□ -2.16
ATG11YPR049C HIT1P46973 164 aa1.56□□□□□ -2.16
ATG11YPR049C YNL010WP53981 241 aaKnown RBP1.56□□□□□ -2.16
ATG11YPR049C BNA7Q04066 261 aa1.56□□□□□ -2.16
ATG11YPR049C APC9Q12107 265 aa1.56□□□□□ -2.16
ATG11YPR049C HMS1Q12398 434 aa1.56□□□□□ -2.16
ATG11YPR049C SGA1P08019 549 aa1.56□□□□□ -2.16
ATG11YPR049C JEN1P36035 616 aa1.56□□□□□ -2.16
ATG11YPR049C TSC10P38342 320 aa1.56□□□□□ -2.16
ATG11YPR049C RMD6P39975 231 aa1.56□□□□□ -2.16
ATG11YPR049C SLM1P40485 686 aa1.56□□□□□ -2.16
ATG11YPR049C VPS55P47111 140 aa1.56□□□□□ -2.16
ATG11YPR049C BIO4P53630 237 aa1.56□□□□□ -2.16
ATG11YPR049C GRH1Q04410 372 aaKnown RBP1.56□□□□□ -2.16
ATG11YPR049C YOR289WQ12012 251 aaPredicted RBP1.56□□□□□ -2.16
ATG11YPR049C FAR1P21268 830 aa1.55□□□□□ -2.16
ATG11YPR049C NUP2P32499 720 aa1.55□□□□□ -2.16
ATG11YPR049C RIB7P33312 244 aa1.55□□□□□ -2.16
ATG11YPR049C LHP1P33399 275 aaKnown RBP1.55□□□□□ -2.16
ATG11YPR049C YKL063CP35725 167 aa1.55□□□□□ -2.16
ATG11YPR049C SRO77P38163 1010 aa1.55□□□□□ -2.16
ATG11YPR049C SOP4P39543 234 aaPredicted RBP1.55□□□□□ -2.16
ATG11YPR049C CIN5P40917 295 aa1.55□□□□□ -2.16
ATG11YPR049C MET31Q03081 177 aa1.55□□□□□ -2.16
ATG11YPR049C MGR3Q04472 501 aa1.55□□□□□ -2.16
ATG11YPR049C LOT6Q07923 191 aa1.55□□□□□ -2.16
ATG11YPR049C SFM1Q12314 213 aa1.55□□□□□ -2.16
ATG11YPR049C RPL35AP0CX84 120 aaKnown RBP1.55□□□□□ -2.16
ATG11YPR049C RPL35BP0CX85 120 aaKnown RBP1.55□□□□□ -2.16
ATG11YPR049C DPB2P24482 689 aaPredicted RBP1.55□□□□□ -2.16
ATG11YPR049C PEX4P29340 183 aa1.55□□□□□ -2.16
ATG11YPR049C AIM10P39965 576 aaKnown RBP1.55□□□□□ -2.16
ATG11YPR049C SPC2Q04969 178 aa1.55□□□□□ -2.16
ATG11YPR049C RNH202Q05635 350 aa1.55□□□□□ -2.16
ATG11YPR049C RBS1Q05672 457 aaKnown RBP1.55□□□□□ -2.16
ATG11YPR049C PRM3Q08931 133 aa1.55□□□□□ -2.16
ATG11YPR049C REP2P03872 296 aa1.54□□□□□ -2.16
ATG11YPR049C RPS16AP0CX51 143 aaKnown RBP1.54□□□□□ -2.16
ATG11YPR049C RPS16BP0CX52 143 aaKnown RBP1.54□□□□□ -2.16
ATG11YPR049C SNF6P18888 332 aa1.54□□□□□ -2.16
ATG11YPR049C GIT1P25346 518 aa1.54□□□□□ -2.16
ATG11YPR049C ZRT3P34240 503 aa1.54□□□□□ -2.16
ATG11YPR049C YRA2P36036 203 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
ATG11YPR049C MIC12P38341 106 aa1.54□□□□□ -2.16
ATG11YPR049C MDM31P38880 579 aa1.54□□□□□ -2.16
ATG11YPR049C YGR201CP42936 225 aa1.54□□□□□ -2.16
ATG11YPR049C MIG2P53035 382 aa1.54□□□□□ -2.16
ATG11YPR049C MEP3P53390 489 aa1.54□□□□□ -2.16
ATG11YPR049C MRP51Q02950 344 aa1.54□□□□□ -2.16
ATG11YPR049C BET5Q03630 159 aa1.54□□□□□ -2.16
ATG11YPR049C NDE2Q07500 545 aa1.54□□□□□ -2.16
ATG11YPR049C FRE6Q12473 712 aa1.54□□□□□ -2.16
ATG11YPR049C ATP10P18496 279 aa1.54□□□□□ -2.16
ATG11YPR049C ANR2P36090 516 aaPredicted RBP1.54□□□□□ -2.16
ATG11YPR049C PRS4P38063 326 aaPredicted RBP1.54□□□□□ -2.16
ATG11YPR049C FZO1P38297 855 aa1.54□□□□□ -2.16
ATG11YPR049C YIL060WP40519 144 aa1.54□□□□□ -2.16
ATG11YPR049C YPL077CQ02831 240 aa1.54□□□□□ -2.16
ATG11YPR049C MED4Q12343 284 aa1.54□□□□□ -2.16
ATG11YPR049C COX2P00410 251 aa1.54□□□□□ -2.16
ATG11YPR049C MES1P00958 751 aaKnown RBP1.54□□□□□ -2.16
ATG11YPR049C DSF1P0CX08 502 aa1.54□□□□□ -2.16
ATG11YPR049C YNR073CP0CX09 502 aa1.54□□□□□ -2.16
ATG11YPR049C IDH1P28834 360 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
ATG11YPR049C ECM4P36156 370 aa1.54□□□□□ -2.16
ATG11YPR049C ECM34P38728 170 aa1.54□□□□□ -2.16
ATG11YPR049C RTC3P38804 111 aaPredicted RBP1.54□□□□□ -2.16
ATG11YPR049C YRB2P40517 327 aa1.54□□□□□ -2.16
ATG11YPR049C FBA1P14540 359 aaKnown RBP1.53□□□□□ -2.16
ATG11YPR049C BUD5P25300 642 aaPredicted RBP1.53□□□□□ -2.16
ATG11YPR049C YCR100CP25606 316 aa1.53□□□□□ -2.16
ATG11YPR049C RPC19P28000 142 aaKnown RBP1.53□□□□□ -2.16
ATG11YPR049C MRP20P32387 263 aa1.53□□□□□ -2.16
ATG11YPR049C NDC1P32500 655 aa1.53□□□□□ -2.16
ATG11YPR049C MDL1P33310 695 aa1.53□□□□□ -2.16
ATG11YPR049C SYG1P40528 902 aa1.53□□□□□ -2.16
ATG11YPR049C STB1P42845 420 aa1.53□□□□□ -2.16
ATG11YPR049C DIE2P50076 525 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 544.5 ms