RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeastyeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFI1YPL254W VMA9Q3E7B6 73 aa4.85□□□□□ -1.63
HFI1YPL254W YER145C-AA0A023PYF4 145 aa4.84□□□□□ -1.63
HFI1YPL254W STE18P18852 110 aa4.84□□□□□ -1.63
HFI1YPL254W SRB6P32570 121 aa4.84□□□□□ -1.63
HFI1YPL254W PAD1P33751 242 aaKnown RBP RIP-Chip data4.84□□□□□ -1.63not detected
HFI1YPL254W YKL071WP36086 256 aa4.84□□□□□ -1.63
HFI1YPL254W GCV3P39726 170 aaPredicted RBP4.84□□□□□ -1.63
HFI1YPL254W YER010CP40011 234 aa4.84□□□□□ -1.63
HFI1YPL254W YFR054CP43622 192 aa4.84□□□□□ -1.63
HFI1YPL254W CIN2P46670 268 aa4.84□□□□□ -1.63
HFI1YPL254W CIS3P47001 227 aa4.84□□□□□ -1.63
HFI1YPL254W YGR026WP53217 278 aa4.84□□□□□ -1.63
HFI1YPL254W MPA43P53583 542 aaPredicted RBP4.84□□□□□ -1.63
HFI1YPL254W CTF19Q02732 369 aa4.84□□□□□ -1.63
HFI1YPL254W SRO7Q12038 1033 aa4.84□□□□□ -1.63
HFI1YPL254W PCC1Q3E833 88 aa4.84□□□□□ -1.63
HFI1YPL254W MEX67Q99257 599 aaKnown RBP4.84□□□□□ -1.63
HFI1YPL254W TPI1P00942 248 aaKnown RBP4.83□□□□□ -1.64
HFI1YPL254W ADH7P25377 361 aa4.83□□□□□ -1.64
HFI1YPL254W SPT10P35208 640 aa4.83□□□□□ -1.64
HFI1YPL254W COS8P38723 381 aa4.83□□□□□ -1.64
HFI1YPL254W BFR1P38934 470 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
HFI1YPL254W PRP39P39682 629 aaKnown RBP4.83□□□□□ -1.64
HFI1YPL254W PHB2P50085 310 aa4.83□□□□□ -1.64
HFI1YPL254W MRX8Q05473 314 aa4.83□□□□□ -1.64
HFI1YPL254W YRM1Q12340 786 aa4.83□□□□□ -1.64
HFI1YPL254W TFB5Q3E7C1 72 aaPredicted RBP4.83□□□□□ -1.64
HFI1YPL254W ISN1Q99312 450 aa4.83□□□□□ -1.64
HFI1YPL254W IPP1P00817 287 aaKnown RBP4.82□□□□□ -1.64
HFI1YPL254W OPI3P05375 206 aa4.82□□□□□ -1.64
HFI1YPL254W RPL1AP0CX43 217 aaKnown RBP4.82□□□□□ -1.64
HFI1YPL254W RPL1BP0CX44 217 aaKnown RBP4.82□□□□□ -1.64
HFI1YPL254W YER190C-BP0CX94 160 aa4.82□□□□□ -1.64
HFI1YPL254W YEL077W-AP0CX95 160 aa4.82□□□□□ -1.64
HFI1YPL254W YGR296C-BP0CX96 160 aa4.82□□□□□ -1.64
HFI1YPL254W YPL283W-BP0CX97 160 aa4.82□□□□□ -1.64
HFI1YPL254W YPR204C-AP0CX98 160 aa4.82□□□□□ -1.64
HFI1YPL254W HNM1P19807 563 aa4.82□□□□□ -1.64
HFI1YPL254W PPA2P28239 310 aa4.82□□□□□ -1.64
HFI1YPL254W PMT2P31382 759 aa4.82□□□□□ -1.64
HFI1YPL254W SOF1P33750 489 aaKnown RBP4.82□□□□□ -1.64
HFI1YPL254W MRPL27P36526 146 aaPredicted RBP4.82□□□□□ -1.64
HFI1YPL254W OM14P38325 134 aa4.82□□□□□ -1.64
HFI1YPL254W PFS1P38872 237 aa4.82□□□□□ -1.64
HFI1YPL254W AVT7P40501 490 aa4.82□□□□□ -1.64
HFI1YPL254W YIL067CP40514 678 aa4.82□□□□□ -1.64
HFI1YPL254W SYS1P41544 203 aa4.82□□□□□ -1.64
HFI1YPL254W CCC1P47818 322 aa4.82□□□□□ -1.64
HFI1YPL254W BXI1P48558 297 aa4.82□□□□□ -1.64
HFI1YPL254W NCE101Q02820 53 aa4.82□□□□□ -1.64
HFI1YPL254W EST3Q03096 181 aa4.82□□□□□ -1.64
HFI1YPL254W SNO1Q03144 224 aa4.82□□□□□ -1.64
HFI1YPL254W YPR172WQ06608 200 aa4.82□□□□□ -1.64
HFI1YPL254W YPR174CQ06616 221 aaPredicted RBP4.82□□□□□ -1.64
HFI1YPL254W YEH1Q07804 573 aa4.82□□□□□ -1.64
HFI1YPL254W RRT7Q07829 113 aa4.82□□□□□ -1.64
HFI1YPL254W GEP3Q08622 556 aa4.82□□□□□ -1.64
HFI1YPL254W YDR262WQ12331 272 aa4.82□□□□□ -1.64
HFI1YPL254W SNU23Q12368 194 aaPredicted RBP4.82□□□□□ -1.64
HFI1YPL254W PRM4Q12498 284 aa4.82□□□□□ -1.64
HFI1YPL254W URA6P15700 204 aa4.81□□□□□ -1.64
HFI1YPL254W PET18P25362 215 aa4.81□□□□□ -1.64
HFI1YPL254W AGA2P32781 87 aa4.81□□□□□ -1.64
HFI1YPL254W FMT1P32785 401 aa4.81□□□□□ -1.64
HFI1YPL254W ASP1P38986 381 aaPredicted RBP4.81□□□□□ -1.64
HFI1YPL254W SMB1P40018 196 aaKnown RBP4.81□□□□□ -1.64
HFI1YPL254W YIR035CP40579 254 aa4.81□□□□□ -1.64
HFI1YPL254W NRK1P53915 240 aa4.81□□□□□ -1.64
HFI1YPL254W YLR152CP54072 576 aa4.81□□□□□ -1.64
HFI1YPL254W PET191Q02772 108 aa4.81□□□□□ -1.64
HFI1YPL254W EKI1Q03764 534 aa4.81□□□□□ -1.64
HFI1YPL254W RVB1Q03940 463 aaKnown RBP4.81□□□□□ -1.64
HFI1YPL254W MRPL51Q06090 140 aaPredicted RBP4.81□□□□□ -1.64
HFI1YPL254W NOC4Q06512 552 aaPredicted RBP4.81□□□□□ -1.64
HFI1YPL254W COQ10Q08058 207 aa4.81□□□□□ -1.64
HFI1YPL254W TAO3P40468 2376 aa4.81□□□□□ -1.64
HFI1YPL254W CHO1P08456 276 aa4.81□□□□□ -1.64
HFI1YPL254W SSA3P09435 649 aaKnown RBP4.81□□□□□ -1.64
HFI1YPL254W TRS65P32893 560 aa4.81□□□□□ -1.64
HFI1YPL254W RPS27AP35997 82 aaKnown RBP4.81□□□□□ -1.64
HFI1YPL254W POP8P38208 133 aa4.81□□□□□ -1.64
HFI1YPL254W SSH1P38353 490 aaKnown RBP4.81□□□□□ -1.64
HFI1YPL254W RPS27BP38711 82 aa4.81□□□□□ -1.64
HFI1YPL254W WSC4P38739 605 aa4.81□□□□□ -1.64
HFI1YPL254W YHR180WP38868 163 aa4.81□□□□□ -1.64
HFI1YPL254W NSE4P43124 402 aa4.81□□□□□ -1.64
HFI1YPL254W AGX1P43567 385 aa4.81□□□□□ -1.64
HFI1YPL254W RMD9P53140 646 aaKnown RBP4.81□□□□□ -1.64
HFI1YPL254W MPP6P53725 186 aaPredicted RBP4.81□□□□□ -1.64
HFI1YPL254W FMP41P53889 259 aaKnown RBP4.81□□□□□ -1.64
HFI1YPL254W GIM3P53900 129 aa4.81□□□□□ -1.64
HFI1YPL254W RPL15BP54780 204 aaPredicted RBP4.81□□□□□ -1.64
HFI1YPL254W SKO1Q02100 647 aa4.81□□□□□ -1.64
HFI1YPL254W EGD1Q02642 157 aaKnown RBP4.81□□□□□ -1.64
HFI1YPL254W CAC2Q04199 468 aa4.81□□□□□ -1.64
HFI1YPL254W SYM1Q06563 197 aa4.81□□□□□ -1.64
HFI1YPL254W BER1Q06688 274 aaKnown RBP4.81□□□□□ -1.64
HFI1YPL254W LUC7Q07508 261 aaPredicted RBP4.81□□□□□ -1.64
HFI1YPL254W SCP1Q08873 200 aa4.81□□□□□ -1.64
HFI1YPL254W PET20Q99373 253 aa4.81□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 188.3 ms