RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C ADD37Q03233 198 aa6.6□□□□□ -1.35
RUP1YOR138C MIM1Q08176 113 aa6.6□□□□□ -1.35
RUP1YOR138C UBA3Q99344 299 aa6.6□□□□□ -1.35
RUP1YOR138C CYT1P07143 309 aa6.59□□□□□ -1.35
RUP1YOR138C HSP150P32478 413 aa6.59□□□□□ -1.35
RUP1YOR138C AGA2P32781 87 aa6.59□□□□□ -1.35
RUP1YOR138C RMD6P39975 231 aa6.59□□□□□ -1.35
RUP1YOR138C RFC2P40348 353 aa6.59□□□□□ -1.35
RUP1YOR138C LSB3P43603 459 aaKnown RBP6.59□□□□□ -1.35
RUP1YOR138C YJR011CP47086 261 aaPredicted RBP6.59□□□□□ -1.35
RUP1YOR138C TRM9P49957 279 aa6.59□□□□□ -1.35
RUP1YOR138C GPI15P53961 229 aa6.59□□□□□ -1.35
RUP1YOR138C YVH1Q02256 364 aaKnown RBP6.59□□□□□ -1.35
RUP1YOR138C VPS28Q02767 242 aa6.59□□□□□ -1.35
RUP1YOR138C MDM30Q05930 598 aa6.59□□□□□ -1.35
RUP1YOR138C SEI1Q06058 285 aa6.59□□□□□ -1.35
RUP1YOR138C CTS2Q06350 511 aa6.59□□□□□ -1.35
RUP1YOR138C YPD1Q07688 167 aa6.59□□□□□ -1.35
RUP1YOR138C RAD28Q12021 506 aa6.59□□□□□ -1.35
RUP1YOR138C AIM17P23180 465 aaKnown RBP6.59□□□□□ -1.36
RUP1YOR138C YNK1P36010 153 aaKnown RBP6.59□□□□□ -1.36
RUP1YOR138C SNO3P43544 222 aa6.59□□□□□ -1.36
RUP1YOR138C YJL016WP47072 561 aa6.59□□□□□ -1.36
RUP1YOR138C ASK10P48361 1146 aa6.59□□□□□ -1.36
RUP1YOR138C YMR253CQ04835 414 aa6.59□□□□□ -1.36
RUP1YOR138C BNA5Q05979 453 aa6.59□□□□□ -1.36
RUP1YOR138C YOR015WQ12169 119 aa6.59□□□□□ -1.36
RUP1YOR138C YCT1Q12235 531 aa6.59□□□□□ -1.36
RUP1YOR138C YLR358CO13565 187 aa6.58□□□□□ -1.36
RUP1YOR138C GDH1P07262 454 aaKnown RBP6.58□□□□□ -1.36
RUP1YOR138C YLL053CP0CD98 152 aa6.58□□□□□ -1.36
RUP1YOR138C MRS4P23500 304 aa6.58□□□□□ -1.36
RUP1YOR138C PCL1P24867 279 aa6.58□□□□□ -1.36
RUP1YOR138C EMP70P32802 667 aa6.58□□□□□ -1.36
RUP1YOR138C APD1P38281 316 aa6.58□□□□□ -1.36
RUP1YOR138C YIL152WP40455 235 aa6.58□□□□□ -1.36
RUP1YOR138C CUZ1P53899 274 aa6.58□□□□□ -1.36
RUP1YOR138C MEH1Q02205 184 aa6.58□□□□□ -1.36
RUP1YOR138C STP3Q05937 343 aa6.58□□□□□ -1.36
RUP1YOR138C COX19Q3E731 98 aa6.58□□□□□ -1.36
RUP1YOR138C QCR2P07257 368 aa6.57□□□□□ -1.36
RUP1YOR138C GLK1P17709 500 aaKnown RBP6.57□□□□□ -1.36
RUP1YOR138C RFA3P26755 122 aaKnown RBP6.57□□□□□ -1.36
RUP1YOR138C DAN1P47178 298 aa6.57□□□□□ -1.36
RUP1YOR138C YIF1P53845 314 aaKnown RBP6.57□□□□□ -1.36
RUP1YOR138C RHO5P53879 331 aaKnown RBP6.57□□□□□ -1.36
RUP1YOR138C MRPS17Q03246 237 aaPredicted RBP6.57□□□□□ -1.36
RUP1YOR138C YDR102CQ03864 110 aa6.57□□□□□ -1.36
RUP1YOR138C THI74Q04083 370 aa6.57□□□□□ -1.36
RUP1YOR138C IMG1P25626 169 aa6.57□□□□□ -1.36
RUP1YOR138C SEF1P34228 1148 aa6.57□□□□□ -1.36
RUP1YOR138C DUG1P43616 481 aaKnown RBP6.57□□□□□ -1.36
RUP1YOR138C NIT2P47016 307 aa6.57□□□□□ -1.36
RUP1YOR138C HSV2P50079 448 aaPredicted RBP6.57□□□□□ -1.36
RUP1YOR138C TIM21P53220 239 aa6.57□□□□□ -1.36
RUP1YOR138C ARL3Q02804 198 aa6.57□□□□□ -1.36
RUP1YOR138C TMA23Q03525 211 aa6.57□□□□□ -1.36
RUP1YOR138C GMC1Q04399 608 aa6.57□□□□□ -1.36
RUP1YOR138C YPR147CQ06522 304 aaKnown RBP6.57□□□□□ -1.36
RUP1YOR138C MED4Q12343 284 aa6.57□□□□□ -1.36
RUP1YOR138C ADH3P07246 375 aaKnown RBP6.56□□□□□ -1.36
RUP1YOR138C POF1P25576 258 aa6.56□□□□□ -1.36
RUP1YOR138C MRPL4P36517 319 aa6.56□□□□□ -1.36
RUP1YOR138C SDH4P37298 181 aa6.56□□□□□ -1.36
RUP1YOR138C IMD2P38697 523 aaKnown RBP6.56□□□□□ -1.36
RUP1YOR138C TIF11P38912 153 aaKnown RBP6.56□□□□□ -1.36
RUP1YOR138C SEN34P39707 275 aa6.56□□□□□ -1.36
RUP1YOR138C ATF1P40353 525 aa6.56□□□□□ -1.36
RUP1YOR138C TAX4P47030 604 aa6.56□□□□□ -1.36
RUP1YOR138C PBP1P53297 722 aaKnown RBP6.56□□□□□ -1.36
RUP1YOR138C TEX1P53851 422 aaKnown RBP6.56□□□□□ -1.36
RUP1YOR138C FYV6P53913 173 aa6.56□□□□□ -1.36
RUP1YOR138C HAS1Q03532 505 aaKnown RBP6.56□□□□□ -1.36
RUP1YOR138C YRA1Q12159 226 aaKnown RBP6.56□□□□□ -1.36
RUP1YOR138C STP22P25604 385 aa6.55□□□□□ -1.36
RUP1YOR138C YCR101CP25607 182 aa6.55□□□□□ -1.36
RUP1YOR138C AFG1P32317 509 aa6.55□□□□□ -1.36
RUP1YOR138C NTF2P33331 125 aaKnown RBP6.55□□□□□ -1.36
RUP1YOR138C SSS1P35179 80 aa6.55□□□□□ -1.36
RUP1YOR138C YEA4P40004 342 aa6.55□□□□□ -1.36
RUP1YOR138C NOP16P40007 231 aaKnown RBP6.55□□□□□ -1.36
RUP1YOR138C SPC25P40014 221 aa6.55□□□□□ -1.36
RUP1YOR138C RPL13BP40212 199 aaKnown RBP6.55□□□□□ -1.36
RUP1YOR138C HXT14P42833 540 aa6.55□□□□□ -1.36
RUP1YOR138C IKS1P47042 667 aa6.55□□□□□ -1.36
RUP1YOR138C YGR126WP53274 230 aa6.55□□□□□ -1.36
RUP1YOR138C YAP1802P53309 568 aa6.55□□□□□ -1.36
RUP1YOR138C YDL086WQ07505 273 aa6.55□□□□□ -1.36
RUP1YOR138C RPL13AQ12690 199 aaPredicted RBP6.55□□□□□ -1.36
RUP1YOR138C IRC24P40580 263 aa6.55□□□□□ -1.36
RUP1YOR138C AVT4P50944 713 aa6.55□□□□□ -1.36
RUP1YOR138C OCA1P50946 238 aaPredicted RBP6.55□□□□□ -1.36
RUP1YOR138C YDR415CQ04033 374 aaPredicted RBP6.55□□□□□ -1.36
RUP1YOR138C MCH4Q08268 501 aa6.55□□□□□ -1.36
RUP1YOR138C TAD3Q9URQ3 322 aa6.55□□□□□ -1.36
RUP1YOR138C YAL064W-BO13512 126 aa6.54□□□□□ -1.36
RUP1YOR138C MES1P00958 751 aaKnown RBP6.54□□□□□ -1.36
RUP1YOR138C CDC7P06243 507 aa6.54□□□□□ -1.36
RUP1YOR138C MIR1P23641 311 aaKnown RBP6.54□□□□□ -1.36
RUP1YOR138C ERV15P38312 142 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms