RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W MGM101P32787 269 aaKnown RBP1.87□□□□□ -2.11
PEP12YOR036W CBT1P36038 271 aaPredicted RBP1.87□□□□□ -2.11
PEP12YOR036W SSH1P38353 490 aaKnown RBP1.87□□□□□ -2.11
PEP12YOR036W YNL194CP40169 301 aa1.87□□□□□ -2.11
PEP12YOR036W YMR144WP40214 342 aaKnown RBP1.87□□□□□ -2.11
PEP12YOR036W HAM1P47119 197 aaKnown RBP1.87□□□□□ -2.11
PEP12YOR036W MGA1P53050 456 aa1.87□□□□□ -2.11
PEP12YOR036W CUS2P53830 285 aaPredicted RBP1.87□□□□□ -2.11
PEP12YOR036W CLP1Q08685 445 aaPredicted RBP1.87□□□□□ -2.11
PEP12YOR036W YPR011CQ12251 326 aa1.87□□□□□ -2.11
PEP12YOR036W MRX4Q12467 430 aa1.87□□□□□ -2.11
PEP12YOR036W AGC1Q12482 902 aa1.87□□□□□ -2.11
PEP12YOR036W YLR462WO13556 202 aa1.86□□□□□ -2.11
PEP12YOR036W SGA1P08019 549 aa1.86□□□□□ -2.11
PEP12YOR036W TAF14P35189 244 aa1.86□□□□□ -2.11
PEP12YOR036W YEL075CP39972 122 aa1.86□□□□□ -2.11
PEP12YOR036W YER034WP40022 185 aaKnown RBP1.86□□□□□ -2.11
PEP12YOR036W PFS2P42841 465 aaKnown RBP1.86□□□□□ -2.11
PEP12YOR036W BRR6P53062 197 aa1.86□□□□□ -2.11
PEP12YOR036W FAR8Q05040 523 aa1.86□□□□□ -2.11
PEP12YOR036W PST1Q12355 444 aa1.86□□□□□ -2.11
PEP12YOR036W GEP5Q12393 293 aa1.86□□□□□ -2.11
PEP12YOR036W SWI1P09547 1314 aa1.86□□□□□ -2.11
PEP12YOR036W YDR157WA0A023PZE8 133 aa1.85□□□□□ -2.11
PEP12YOR036W ASF2P32448 525 aaPredicted RBP1.85□□□□□ -2.11
PEP12YOR036W FMT1P32785 401 aa1.85□□□□□ -2.11
PEP12YOR036W SRY1P36007 326 aa1.85□□□□□ -2.11
PEP12YOR036W PEX17P40155 199 aa1.85□□□□□ -2.11
PEP12YOR036W RFC4P40339 323 aaKnown RBP1.85□□□□□ -2.11
PEP12YOR036W YRB2P40517 327 aa1.85□□□□□ -2.11
PEP12YOR036W NUP57P48837 541 aa1.85□□□□□ -2.11
PEP12YOR036W ALG13P53178 202 aa1.85□□□□□ -2.11
PEP12YOR036W FYV6P53913 173 aa1.85□□□□□ -2.11
PEP12YOR036W RSM10Q03201 203 aa1.85□□□□□ -2.11
PEP12YOR036W YDR114CQ04597 100 aa1.85□□□□□ -2.11
PEP12YOR036W YMR226CQ05016 267 aaKnown RBP1.85□□□□□ -2.11
PEP12YOR036W YPR195CQ06594 109 aa1.85□□□□□ -2.11
PEP12YOR036W SLD7Q08457 257 aa1.85□□□□□ -2.11
PEP12YOR036W MSA1Q08471 629 aa1.85□□□□□ -2.11
PEP12YOR036W YOR268CQ08734 132 aa1.85□□□□□ -2.11
PEP12YOR036W JLP1Q12358 412 aa1.85□□□□□ -2.11
PEP12YOR036W SIR4P11978 1358 aa1.85□□□□□ -2.11
PEP12YOR036W RPL28P02406 149 aaKnown RBP1.84□□□□□ -2.11
PEP12YOR036W RAD10P06838 210 aa1.84□□□□□ -2.11
PEP12YOR036W MET2P08465 486 aa1.84□□□□□ -2.11
PEP12YOR036W URA6P15700 204 aa1.84□□□□□ -2.11
PEP12YOR036W SPO73P40031 143 aa1.84□□□□□ -2.11
PEP12YOR036W ADO1P47143 340 aaKnown RBP1.84□□□□□ -2.11
PEP12YOR036W YGL159WP53110 370 aa1.84□□□□□ -2.11
PEP12YOR036W SYF2P53277 215 aaPredicted RBP1.84□□□□□ -2.11
PEP12YOR036W DID2P69771 204 aa1.84□□□□□ -2.11
PEP12YOR036W SNZ1Q03148 297 aa1.84□□□□□ -2.11
PEP12YOR036W INM2Q05533 292 aa1.84□□□□□ -2.11
PEP12YOR036W YLR179CQ06252 201 aaKnown RBP1.84□□□□□ -2.11
PEP12YOR036W HEM25Q07534 307 aa1.84□□□□□ -2.11
PEP12YOR036W YLR030WQ07967 263 aa1.84□□□□□ -2.11
PEP12YOR036W FEX1Q08913 375 aa1.84□□□□□ -2.11
PEP12YOR036W FEX2Q08991 375 aa1.84□□□□□ -2.11
PEP12YOR036W GET4Q12125 312 aa1.84□□□□□ -2.11
PEP12YOR036W YHR139C-AO13536 103 aa1.83□□□□□ -2.12
PEP12YOR036W RSA4P25382 515 aaKnown RBP1.83□□□□□ -2.12
PEP12YOR036W ERG24P32462 438 aaKnown RBP1.83□□□□□ -2.12
PEP12YOR036W COS8P38723 381 aa1.83□□□□□ -2.12
PEP12YOR036W IKI1P38874 309 aa1.83□□□□□ -2.12
PEP12YOR036W YER084WP40057 128 aa1.83□□□□□ -2.12
PEP12YOR036W TIF34P40217 347 aaKnown RBP1.83□□□□□ -2.12
PEP12YOR036W CAT5P41735 233 aa1.83□□□□□ -2.12
PEP12YOR036W RPA43P46669 326 aa1.83□□□□□ -2.12
PEP12YOR036W OST2P46964 130 aa1.83□□□□□ -2.12
PEP12YOR036W ILM1P47155 203 aa1.83□□□□□ -2.12
PEP12YOR036W RMR1P53060 241 aa1.83□□□□□ -2.12
PEP12YOR036W GTR2P53290 341 aa1.83□□□□□ -2.12
PEP12YOR036W YRA1Q12159 226 aaKnown RBP1.83□□□□□ -2.12
PEP12YOR036W IPP1P00817 287 aaKnown RBP1.82□□□□□ -2.12
PEP12YOR036W HTB1P02293 131 aaKnown RBP1.82□□□□□ -2.12
PEP12YOR036W HTB2P02294 131 aa1.82□□□□□ -2.12
PEP12YOR036W MATALPHA2P0CY08 210 aa1.82□□□□□ -2.12
PEP12YOR036W HMLALPHA2P0CY09 210 aa1.82□□□□□ -2.12
PEP12YOR036W DPM1P14020 267 aaKnown RBP1.82□□□□□ -2.12
PEP12YOR036W KRE1P17260 313 aa1.82□□□□□ -2.12
PEP12YOR036W YPK2P18961 677 aa1.82□□□□□ -2.12
PEP12YOR036W RFA3P26755 122 aaKnown RBP1.82□□□□□ -2.12
PEP12YOR036W IDH1P28834 360 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
PEP12YOR036W ARC19P33204 171 aaKnown RBP1.82□□□□□ -2.12
PEP12YOR036W YPT52P36018 234 aaKnown RBP1.82□□□□□ -2.12
PEP12YOR036W RCN1P36054 211 aa1.82□□□□□ -2.12
PEP12YOR036W MSA2P36157 363 aa1.82□□□□□ -2.12
PEP12YOR036W RPF1P38805 295 aaKnown RBP1.82□□□□□ -2.12
PEP12YOR036W GON7P46984 123 aa1.82□□□□□ -2.12
PEP12YOR036W IRC18P47056 224 aa1.82□□□□□ -2.12
PEP12YOR036W YJR056CP47115 236 aa1.82□□□□□ -2.12
PEP12YOR036W YJR141WP47172 347 aaPredicted RBP1.82□□□□□ -2.12
PEP12YOR036W CAB4P53332 305 aa1.82□□□□□ -2.12
PEP12YOR036W ERV29P53337 310 aa1.82□□□□□ -2.12
PEP12YOR036W GRH1Q04410 372 aaKnown RBP1.82□□□□□ -2.12
PEP12YOR036W ABP140Q08641 628 aaKnown RBP1.82□□□□□ -2.12
PEP12YOR036W PRM7Q12459 698 aa1.82□□□□□ -2.12
PEP12YOR036W LSO2Q3E772 92 aaKnown RBP1.82□□□□□ -2.12
PEP12YOR036W YCL012CQ8J0M4 134 aa1.82□□□□□ -2.12
PEP12YOR036W HTL1Q9URQ5 78 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 169.7 ms