RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C YIL002W-AQ3E7Z5 69 aa0.09□□□□□ -2.4
NIP1YMR309C COX5AP00424 153 aa0.08□□□□□ -2.4
NIP1YMR309C YKR104WP0CE69 306 aa0.08□□□□□ -2.4
NIP1YMR309C NSP1P14907 823 aaKnown RBP0.08□□□□□ -2.4
NIP1YMR309C FZF1P32805 299 aa0.08□□□□□ -2.4
NIP1YMR309C MRX3P38172 270 aa0.08□□□□□ -2.4
NIP1YMR309C CTR2P38865 189 aa0.08□□□□□ -2.4
NIP1YMR309C SVP26P38869 228 aa0.08□□□□□ -2.4
NIP1YMR309C RCY1P39531 840 aa0.08□□□□□ -2.4
NIP1YMR309C DDI1P40087 428 aa0.08□□□□□ -2.4
NIP1YMR309C SNZ3P43545 298 aa0.08□□□□□ -2.4
NIP1YMR309C MRH4P53166 561 aa0.08□□□□□ -2.4
NIP1YMR309C YGL034CP53186 121 aa0.08□□□□□ -2.4
NIP1YMR309C SAY1P53324 424 aa0.08□□□□□ -2.4
NIP1YMR309C PRO2P54885 456 aaKnown RBP0.08□□□□□ -2.4
NIP1YMR309C CDC14Q00684 551 aa0.08□□□□□ -2.4
NIP1YMR309C UBC7Q02159 165 aa0.08□□□□□ -2.4
NIP1YMR309C OST6Q03723 332 aa0.08□□□□□ -2.4
NIP1YMR309C AIM36Q03798 255 aa0.08□□□□□ -2.4
NIP1YMR309C ERV41Q04651 352 aa0.08□□□□□ -2.4
NIP1YMR309C SSQ1Q05931 657 aaPredicted RBP0.08□□□□□ -2.4
NIP1YMR309C GMC2Q06201 188 aa0.08□□□□□ -2.4
NIP1YMR309C SYC1Q08553 188 aaPredicted RBP0.08□□□□□ -2.4
NIP1YMR309C RRS1Q08746 203 aaKnown RBP0.08□□□□□ -2.4
NIP1YMR309C FMP16Q12497 93 aa0.08□□□□□ -2.4
NIP1YMR309C HTL1Q9URQ5 78 aa0.08□□□□□ -2.4
NIP1YMR309C MSB2P32334 1306 aa0.08□□□□□ -2.4
NIP1YMR309C SSA3P09435 649 aaKnown RBP0.08□□□□□ -2.4
NIP1YMR309C SNA3P14359 133 aa0.08□□□□□ -2.4
NIP1YMR309C MEK1P24719 497 aaPredicted RBP0.08□□□□□ -2.4
NIP1YMR309C QRI5P32344 111 aa0.08□□□□□ -2.4
NIP1YMR309C TVP38P36164 337 aa0.08□□□□□ -2.4
NIP1YMR309C YER076CP40049 302 aa0.08□□□□□ -2.4
NIP1YMR309C YNL217WP40152 326 aa0.08□□□□□ -2.4
NIP1YMR309C COA1P40452 197 aa0.08□□□□□ -2.4
NIP1YMR309C ICE2P40499 491 aa0.08□□□□□ -2.4
NIP1YMR309C TIR3P40552 269 aa0.08□□□□□ -2.4
NIP1YMR309C GCD14P46959 383 aaPredicted RBP0.08□□□□□ -2.4
NIP1YMR309C GPI8P49018 411 aa0.08□□□□□ -2.4
NIP1YMR309C LSB1P53281 241 aa0.08□□□□□ -2.4
NIP1YMR309C MPA43P53583 542 aaPredicted RBP0.08□□□□□ -2.4
NIP1YMR309C MPP6P53725 186 aaPredicted RBP0.08□□□□□ -2.4
NIP1YMR309C RHO3Q00245 231 aaKnown RBP0.08□□□□□ -2.4
NIP1YMR309C YLR413WQ06689 675 aa0.08□□□□□ -2.4
NIP1YMR309C REX3Q12090 404 aa0.08□□□□□ -2.4
NIP1YMR309C SLH1P53327 1967 aaKnown RBP0.08□□□□□ -2.4
NIP1YMR309C SIR4P11978 1358 aa0.08□□□□□ -2.4
NIP1YMR309C MRPS28P21771 286 aa0.07□□□□□ -2.4
NIP1YMR309C TMA19P35691 167 aaKnown RBP0.07□□□□□ -2.4
NIP1YMR309C KDX1P36005 433 aa0.07□□□□□ -2.4
NIP1YMR309C YPT52P36018 234 aaKnown RBP0.07□□□□□ -2.4
NIP1YMR309C JEN1P36035 616 aa0.07□□□□□ -2.4
NIP1YMR309C RIO2P40160 425 aaKnown RBP0.07□□□□□ -2.4
NIP1YMR309C MEP1P40260 492 aa0.07□□□□□ -2.4
NIP1YMR309C SNZ2P53824 298 aa0.07□□□□□ -2.4
NIP1YMR309C YPR098CQ06089 161 aa0.07□□□□□ -2.4
NIP1YMR309C ARR2Q06597 130 aa0.07□□□□□ -2.4
NIP1YMR309C YCT1Q12235 531 aa0.07□□□□□ -2.4
NIP1YMR309C YOR020W-AQ3E824 90 aa0.07□□□□□ -2.4
NIP1YMR309C CDC8P00572 216 aa0.07□□□□□ -2.4
NIP1YMR309C GRX2P17695 143 aaKnown RBP0.07□□□□□ -2.4
NIP1YMR309C OPI1P21957 404 aa0.07□□□□□ -2.4
NIP1YMR309C RRF1P38771 230 aa0.07□□□□□ -2.4
NIP1YMR309C SOK1P40317 901 aa0.07□□□□□ -2.4
NIP1YMR309C DSN1P40568 576 aa0.07□□□□□ -2.4
NIP1YMR309C ERJ5P43613 295 aaPredicted RBP0.07□□□□□ -2.4
NIP1YMR309C FMP33P46998 180 aa0.07□□□□□ -2.4
NIP1YMR309C YJR056CP47115 236 aa0.07□□□□□ -2.4
NIP1YMR309C EMC2P47133 292 aaKnown RBP0.07□□□□□ -2.4
NIP1YMR309C ILM1P47155 203 aa0.07□□□□□ -2.4
NIP1YMR309C SPG4Q04438 115 aa0.07□□□□□ -2.4
NIP1YMR309C YPR172WQ06608 200 aa0.07□□□□□ -2.4
NIP1YMR309C TPO4Q12256 659 aa0.07□□□□□ -2.4
NIP1YMR309C SNU23Q12368 194 aaPredicted RBP0.07□□□□□ -2.4
NIP1YMR309C SNF8Q12483 233 aa0.07□□□□□ -2.4
NIP1YMR309C MRPL40P36534 297 aa0.06□□□□□ -2.4
NIP1YMR309C PRS2P38620 318 aaKnown RBP0.06□□□□□ -2.4
NIP1YMR309C YHR127WP38833 243 aaKnown RBP0.06□□□□□ -2.4
NIP1YMR309C LOC1P43586 204 aaPredicted RBP0.06□□□□□ -2.4
NIP1YMR309C HAM1P47119 197 aaKnown RBP0.06□□□□□ -2.4
NIP1YMR309C AIF1P52923 378 aa0.06□□□□□ -2.4
NIP1YMR309C KAP114P53067 1004 aa0.06□□□□□ -2.4
NIP1YMR309C USE1P53146 245 aa0.06□□□□□ -2.4
NIP1YMR309C ALG11P53954 548 aaKnown RBP0.06□□□□□ -2.4
NIP1YMR309C YMD8Q03697 442 aa0.06□□□□□ -2.4
NIP1YMR309C ANT1Q06497 328 aa0.06□□□□□ -2.4
NIP1YMR309C YOR186WQ08560 144 aa0.06□□□□□ -2.4
NIP1YMR309C YDL180WQ12301 547 aa0.06□□□□□ -2.4
NIP1YMR309C YNL146C-AQ3E7Z1 64 aa0.06□□□□□ -2.4
NIP1YMR309C TUS1Q06412 1307 aa0.06□□□□□ -2.4
NIP1YMR309C RPL24AP04449 155 aaKnown RBP0.06□□□□□ -2.4
NIP1YMR309C RPL27BP0C2H7 136 aaKnown RBP0.06□□□□□ -2.4
NIP1YMR309C YPR170W-BP0C5R9 85 aa0.06□□□□□ -2.4
NIP1YMR309C DAL82P21705 255 aa0.06□□□□□ -2.4
NIP1YMR309C EBP2P36049 427 aaKnown RBP0.06□□□□□ -2.4
NIP1YMR309C YBR063CP38083 404 aa0.06□□□□□ -2.4
NIP1YMR309C YEL067CP39978 195 aa0.06□□□□□ -2.4
NIP1YMR309C YMR144WP40214 342 aaKnown RBP0.06□□□□□ -2.4
NIP1YMR309C CAT5P41735 233 aa0.06□□□□□ -2.4
NIP1YMR309C EGD1Q02642 157 aaKnown RBP0.06□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 106.1 ms