RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C GLR1P41921 483 aaKnown RBP0.68□□□□□ -2.3
RKR1YMR247C GPI8P49018 411 aa0.68□□□□□ -2.3
RKR1YMR247C UBC12P52491 188 aa0.68□□□□□ -2.3
RKR1YMR247C YGR018CP53211 109 aa0.68□□□□□ -2.3
RKR1YMR247C ECM19Q06011 112 aa0.68□□□□□ -2.3
RKR1YMR247C YCT1Q12235 531 aa0.68□□□□□ -2.3
RKR1YMR247C RPN6Q12377 434 aa0.68□□□□□ -2.3
RKR1YMR247C YDL012CQ12489 107 aa0.68□□□□□ -2.3
RKR1YMR247C CAR2P07991 424 aaKnown RBP0.68□□□□□ -2.3
RKR1YMR247C DSF1P0CX08 502 aa0.68□□□□□ -2.3
RKR1YMR247C YNR073CP0CX09 502 aa0.68□□□□□ -2.3
RKR1YMR247C FRS2P15625 503 aaKnown RBP0.68□□□□□ -2.3
RKR1YMR247C SAG1P20840 650 aa0.68□□□□□ -2.3
RKR1YMR247C SRB4P32569 687 aa0.68□□□□□ -2.3
RKR1YMR247C SNC2P33328 115 aa0.68□□□□□ -2.3
RKR1YMR247C SDH4P37298 181 aa0.68□□□□□ -2.3
RKR1YMR247C SMP1P38128 452 aa0.68□□□□□ -2.3
RKR1YMR247C YBR209WP38311 105 aa0.68□□□□□ -2.3
RKR1YMR247C PRS2P38620 318 aaKnown RBP0.68□□□□□ -2.3
RKR1YMR247C RCY1P39531 840 aa0.68□□□□□ -2.3
RKR1YMR247C PGA2P53903 129 aa0.68□□□□□ -2.3
RKR1YMR247C SCS7Q03529 384 aa0.68□□□□□ -2.3
RKR1YMR247C RIO1Q12196 484 aaKnown RBP0.68□□□□□ -2.3
RKR1YMR247C TIR4Q12218 487 aaPredicted RBP0.68□□□□□ -2.3
RKR1YMR247C YDL180WQ12301 547 aa0.68□□□□□ -2.3
RKR1YMR247C YAL067W-AQ8TGK6 75 aa0.68□□□□□ -2.3
RKR1YMR247C DET1Q99288 334 aaKnown RBP0.68□□□□□ -2.3
RKR1YMR247C SAS5Q99314 248 aa0.68□□□□□ -2.3
RKR1YMR247C HIS1P00498 297 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C MDH3P32419 343 aaKnown RBP RIP-Chip data0.67□□□□□ -2.3not detected
RKR1YMR247C ZRT3P34240 503 aa0.67□□□□□ -2.3
RKR1YMR247C TMA19P35691 167 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C MED6P38782 295 aa0.67□□□□□ -2.3
RKR1YMR247C AYR1P40471 297 aa0.67□□□□□ -2.3
RKR1YMR247C ICE2P40499 491 aa0.67□□□□□ -2.3
RKR1YMR247C PRM10P42946 383 aa0.67□□□□□ -2.3
RKR1YMR247C TMA22P47089 198 aaPredicted RBP0.67□□□□□ -2.3
RKR1YMR247C YNL010WP53981 241 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C GOT1Q03554 138 aa0.67□□□□□ -2.3
RKR1YMR247C YLR173WQ06247 608 aa0.67□□□□□ -2.3
RKR1YMR247C ASR1Q06834 288 aa0.67□□□□□ -2.3
RKR1YMR247C PLB3Q08108 686 aa0.67□□□□□ -2.3
RKR1YMR247C MDY2Q12285 212 aa0.67□□□□□ -2.3
RKR1YMR247C PST1Q12355 444 aa0.67□□□□□ -2.3
RKR1YMR247C BBP1Q12365 385 aa0.67□□□□□ -2.3
RKR1YMR247C OPI3P05375 206 aa0.67□□□□□ -2.3
RKR1YMR247C CBF1P17106 351 aa0.67□□□□□ -2.3
RKR1YMR247C MIG1P27705 504 aa0.67□□□□□ -2.3
RKR1YMR247C SIF2P38262 535 aa0.67□□□□□ -2.3
RKR1YMR247C EDC3P39998 551 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C YER034WP40022 185 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C MCM22P47167 239 aa0.67□□□□□ -2.3
RKR1YMR247C ORM1P53224 222 aa0.67□□□□□ -2.3
RKR1YMR247C YGR219WP53307 113 aa0.67□□□□□ -2.3
RKR1YMR247C CPD1P53314 239 aa0.67□□□□□ -2.3
RKR1YMR247C ALG9P53868 555 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C DPP1Q05521 289 aa0.67□□□□□ -2.3
RKR1YMR247C SSQ1Q05931 657 aaPredicted RBP0.67□□□□□ -2.3
RKR1YMR247C NEJ1Q06148 342 aa0.67□□□□□ -2.3
RKR1YMR247C TAZ1Q06510 381 aa0.67□□□□□ -2.3
RKR1YMR247C GAT3Q07928 141 aa0.67□□□□□ -2.3
RKR1YMR247C SLD7Q08457 257 aa0.67□□□□□ -2.3
RKR1YMR247C PSY3Q12318 242 aa0.67□□□□□ -2.3
RKR1YMR247C YOR012WQ12351 137 aa0.67□□□□□ -2.3
RKR1YMR247C RPL25P04456 142 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C RPL18AP0CX49 186 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C RPL18BP0CX50 186 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C MET16P18408 261 aaPredicted RBP0.67□□□□□ -2.3
RKR1YMR247C MRPL20P22354 195 aaPredicted RBP0.67□□□□□ -2.3
RKR1YMR247C RPL24BP24000 155 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C IMP1P28627 190 aa0.67□□□□□ -2.3
RKR1YMR247C RNP1P32385 249 aa0.67□□□□□ -2.3
RKR1YMR247C YPT52P36018 234 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C JEN1P36035 616 aa0.67□□□□□ -2.3
RKR1YMR247C PHB2P50085 310 aa0.67□□□□□ -2.3
RKR1YMR247C MAL13P53338 473 aa0.67□□□□□ -2.3
RKR1YMR247C ABZ2Q03266 374 aa0.67□□□□□ -2.3
RKR1YMR247C SDC1Q03323 175 aa0.67□□□□□ -2.3
RKR1YMR247C YMR007WQ03675 126 aa0.67□□□□□ -2.3
RKR1YMR247C YDR286CQ05530 114 aa0.67□□□□□ -2.3
RKR1YMR247C YPL257WQ08974 193 aa0.67□□□□□ -2.3
RKR1YMR247C SEY1Q99287 776 aa0.67□□□□□ -2.3
RKR1YMR247C RIF1P29539 1916 aa0.67□□□□□ -2.3
RKR1YMR247C RPS28BP0C0X0 67 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C RPS24AP0CX31 135 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C RPS24BP0CX32 135 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C POX1P13711 748 aa0.67□□□□□ -2.3
RKR1YMR247C YPK2P18961 677 aa0.67□□□□□ -2.3
RKR1YMR247C UTR1P21373 530 aa0.67□□□□□ -2.3
RKR1YMR247C MRPL25P23369 157 aa0.67□□□□□ -2.3
RKR1YMR247C ADH5P38113 351 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C DSE2P38844 325 aa0.67□□□□□ -2.3
RKR1YMR247C SOK1P40317 901 aa0.67□□□□□ -2.3
RKR1YMR247C YKE4P40544 346 aa0.67□□□□□ -2.3
RKR1YMR247C MIC26P50087 233 aa0.67□□□□□ -2.3
RKR1YMR247C BRR6P53062 197 aa0.67□□□□□ -2.3
RKR1YMR247C PRM8P53174 237 aa0.67□□□□□ -2.3
RKR1YMR247C NOP19P53317 196 aaPredicted RBP0.67□□□□□ -2.3
RKR1YMR247C YMR226CQ05016 267 aaKnown RBP0.67□□□□□ -2.3
RKR1YMR247C YLR413WQ06689 675 aa0.67□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms