RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W MRPL39P36533 70 aa1.1□□□□□ -2.23
DDR48YMR173W FMC1P40491 155 aa1.1□□□□□ -2.23
DDR48YMR173W CIS3P47001 227 aa1.1□□□□□ -2.23
DDR48YMR173W USE1P53146 245 aa1.1□□□□□ -2.23
DDR48YMR173W RRN5Q02983 363 aa1.1□□□□□ -2.23
DDR48YMR173W YLR283WQ05867 314 aa1.1□□□□□ -2.23
DDR48YMR173W RRS1Q08746 203 aaKnown RBP1.1□□□□□ -2.23
DDR48YMR173W AKR2Q12013 749 aa1.1□□□□□ -2.23
DDR48YMR173W DSF1P0CX08 502 aa1.09□□□□□ -2.23
DDR48YMR173W YNR073CP0CX09 502 aa1.09□□□□□ -2.23
DDR48YMR173W ERG24P32462 438 aaKnown RBP1.09□□□□□ -2.23
DDR48YMR173W RSM25P40496 264 aa1.09□□□□□ -2.23
DDR48YMR173W NUP84P52891 726 aa1.09□□□□□ -2.23
DDR48YMR173W GTR2P53290 341 aa1.09□□□□□ -2.23
DDR48YMR173W YNL046WP53956 172 aa1.09□□□□□ -2.23
DDR48YMR173W YML108WQ03759 105 aa1.09□□□□□ -2.23
DDR48YMR173W MRPS8Q03799 155 aa1.09□□□□□ -2.23
DDR48YMR173W YPR172WQ06608 200 aa1.09□□□□□ -2.23
DDR48YMR173W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
DDR48YMR173W YCT1Q12235 531 aa1.09□□□□□ -2.23
DDR48YMR173W YOL107WQ12239 342 aa1.09□□□□□ -2.23
DDR48YMR173W ATO3Q12359 275 aa1.09□□□□□ -2.23
DDR48YMR173W SNU23Q12368 194 aaPredicted RBP1.09□□□□□ -2.23
DDR48YMR173W DCN1Q12395 269 aa1.09□□□□□ -2.23
DDR48YMR173W INO80P53115 1489 aa1.09□□□□□ -2.24
DDR48YMR173W MDH2P22133 377 aa1.08□□□□□ -2.24
DDR48YMR173W MDH3P32419 343 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24not detected
DDR48YMR173W RPT5P33297 434 aaKnown RBP1.08□□□□□ -2.24
DDR48YMR173W BFR1P38934 470 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24 RIP-Chip
DDR48YMR173W RMR1P53060 241 aa1.08□□□□□ -2.24
DDR48YMR173W PAM18Q07914 168 aa1.08□□□□□ -2.24
DDR48YMR173W RRT8Q08219 342 aa1.08□□□□□ -2.24
DDR48YMR173W MSH5Q12175 901 aa1.08□□□□□ -2.24
DDR48YMR173W ATG31Q12421 196 aa1.08□□□□□ -2.24
DDR48YMR173W YGL010WP25338 174 aa1.07□□□□□ -2.24
DDR48YMR173W VMA11P32842 164 aa1.07□□□□□ -2.24
DDR48YMR173W YKL075CP36083 450 aa1.07□□□□□ -2.24
DDR48YMR173W YHR127WP38833 243 aaKnown RBP1.07□□□□□ -2.24
DDR48YMR173W BMT5P40493 336 aa1.07□□□□□ -2.24
DDR48YMR173W FIS1P40515 155 aa1.07□□□□□ -2.24
DDR48YMR173W LIA1P47120 325 aaKnown RBP1.07□□□□□ -2.24
DDR48YMR173W YGR219WP53307 113 aa1.07□□□□□ -2.24
DDR48YMR173W DID2P69771 204 aa1.07□□□□□ -2.24
DDR48YMR173W RHO3Q00245 231 aaKnown RBP1.07□□□□□ -2.24
DDR48YMR173W YPL257WQ08974 193 aa1.07□□□□□ -2.24
DDR48YMR173W YOR029WQ12243 111 aa1.07□□□□□ -2.24
DDR48YMR173W SIR4P11978 1358 aa1.07□□□□□ -2.24
DDR48YMR173W IPP1P00817 287 aaKnown RBP1.06□□□□□ -2.24
DDR48YMR173W RPL9AP05738 191 aaKnown RBP1.06□□□□□ -2.24
DDR48YMR173W ERD2P18414 219 aa1.06□□□□□ -2.24
DDR48YMR173W RPO26P20435 155 aa1.06□□□□□ -2.24
DDR48YMR173W SRB4P32569 687 aa1.06□□□□□ -2.24
DDR48YMR173W YPT52P36018 234 aaKnown RBP1.06□□□□□ -2.24
DDR48YMR173W PHO88P38264 188 aaPredicted RBP1.06□□□□□ -2.24
DDR48YMR173W YBR220CP38318 560 aa1.06□□□□□ -2.24
DDR48YMR173W DSE2P38844 325 aa1.06□□□□□ -2.24
DDR48YMR173W PRE6P40303 254 aaKnown RBP1.06□□□□□ -2.24
DDR48YMR173W BNA6P43619 295 aa1.06□□□□□ -2.24
DDR48YMR173W HAM1P47119 197 aaKnown RBP1.06□□□□□ -2.24
DDR48YMR173W HOC1P47124 396 aa1.06□□□□□ -2.24
DDR48YMR173W YJR079WP47126 109 aa1.06□□□□□ -2.24
DDR48YMR173W ILM1P47155 203 aa1.06□□□□□ -2.24
DDR48YMR173W JHD2P47156 728 aaPredicted RBP1.06□□□□□ -2.24
DDR48YMR173W RPL9BP51401 191 aaKnown RBP1.06□□□□□ -2.24
DDR48YMR173W SEI1Q06058 285 aa1.06□□□□□ -2.24
DDR48YMR173W HTL1Q9URQ5 78 aa1.06□□□□□ -2.24
DDR48YMR173W MSW1P04803 379 aa1.05□□□□□ -2.24
DDR48YMR173W SPT3P06844 337 aa1.05□□□□□ -2.24
DDR48YMR173W DDI2P0CH63 225 aa1.05□□□□□ -2.24
DDR48YMR173W DDI3P0CH64 225 aa1.05□□□□□ -2.24
DDR48YMR173W TCP1P12612 559 aaKnown RBP1.05□□□□□ -2.24
DDR48YMR173W SNA3P14359 133 aa1.05□□□□□ -2.24
DDR48YMR173W GRX2P17695 143 aaKnown RBP1.05□□□□□ -2.24
DDR48YMR173W MRPL25P23369 157 aa1.05□□□□□ -2.24
DDR48YMR173W RPS5P26783 225 aaKnown RBP1.05□□□□□ -2.24
DDR48YMR173W OAC1P32332 324 aa1.05□□□□□ -2.24
DDR48YMR173W VPS21P36017 210 aaKnown RBP1.05□□□□□ -2.24
DDR48YMR173W YKR045CP36138 183 aa1.05□□□□□ -2.24
DDR48YMR173W ERV15P38312 142 aa1.05□□□□□ -2.24
DDR48YMR173W CUE1P38428 203 aa1.05□□□□□ -2.24
DDR48YMR173W YHR022CP38763 256 aa1.05□□□□□ -2.24
DDR48YMR173W RPF1P38805 295 aaKnown RBP1.05□□□□□ -2.24
DDR48YMR173W AVT2P39981 480 aa1.05□□□□□ -2.24
DDR48YMR173W GCN20P43535 752 aaKnown RBP1.05□□□□□ -2.24
DDR48YMR173W RPA43P46669 326 aa1.05□□□□□ -2.24
DDR48YMR173W RPC17P47076 161 aa1.05□□□□□ -2.24
DDR48YMR173W MCM22P47167 239 aa1.05□□□□□ -2.24
DDR48YMR173W ERG25P53045 309 aa1.05□□□□□ -2.24
DDR48YMR173W YNL134CP53912 376 aaKnown RBP1.05□□□□□ -2.24
DDR48YMR173W CYT2Q00873 224 aa1.05□□□□□ -2.24
DDR48YMR173W NUP49Q02199 472 aa1.05□□□□□ -2.24
DDR48YMR173W ABF2Q02486 183 aa1.05□□□□□ -2.24
DDR48YMR173W PET117Q02771 107 aa1.05□□□□□ -2.24
DDR48YMR173W ATG39Q06159 398 aa1.05□□□□□ -2.24
DDR48YMR173W ARR2Q06597 130 aa1.05□□□□□ -2.24
DDR48YMR173W MSA1Q08471 629 aa1.05□□□□□ -2.24
DDR48YMR173W NIP7Q08962 181 aaKnown RBP1.05□□□□□ -2.24
DDR48YMR173W RUD3Q12234 484 aaKnown RBP1.05□□□□□ -2.24
DDR48YMR173W NCB2Q92317 146 aa1.05□□□□□ -2.24
DDR48YMR173W YPL229WQ99395 206 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 107.3 ms