RNA–Protein interactions for RNA: YMR008C

PLB1, Transcript of Phospholipase B (lysophospholipase) involved in lipid metabolism, yeastyeast

Gene PLB1, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PLB1YMR008C CAB5Q03941 241 aa8.66□□□□□ -1.02
PLB1YMR008C RTT103Q05543 409 aa8.66□□□□□ -1.02
PLB1YMR008C TDH3P00359 332 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
PLB1YMR008C RPP1AP05318 106 aaPredicted RBP8.66□□□□□ -1.02
PLB1YMR008C RPS31P05759 152 aaKnown RBP8.66□□□□□ -1.02
PLB1YMR008C PDC2P32896 925 aa8.66□□□□□ -1.02
PLB1YMR008C FIG1P38224 298 aa8.66□□□□□ -1.02
PLB1YMR008C COS8P38723 381 aa8.66□□□□□ -1.02
PLB1YMR008C PBP1P53297 722 aaKnown RBP8.66□□□□□ -1.02
PLB1YMR008C COQ11Q05892 277 aa8.66□□□□□ -1.02
PLB1YMR008C THI72Q08579 599 aa8.66□□□□□ -1.02
PLB1YMR008C HUT1Q12520 339 aa8.66□□□□□ -1.02
PLB1YMR008C YBR096WP38256 230 aa8.65□□□□□ -1.02
PLB1YMR008C LSM12P38828 187 aaKnown RBP8.65□□□□□ -1.02
PLB1YMR008C GNA1P43577 159 aaPredicted RBP8.65□□□□□ -1.02
PLB1YMR008C YJR011CP47086 261 aaPredicted RBP8.65□□□□□ -1.02
PLB1YMR008C SCY1P53009 804 aa8.65□□□□□ -1.02
PLB1YMR008C SEN1Q00416 2231 aaKnown RBP8.65□□□□□ -1.02
PLB1YMR008C CDC28P00546 298 aaKnown RBP8.64□□□□□ -1.03
PLB1YMR008C ASP1P38986 381 aaPredicted RBP8.64□□□□□ -1.03
PLB1YMR008C UFD1P53044 361 aa8.64□□□□□ -1.03
PLB1YMR008C TNA1P53322 534 aa8.64□□□□□ -1.03
PLB1YMR008C RRT7Q07829 113 aa8.64□□□□□ -1.03
PLB1YMR008C VAM3Q12241 283 aa8.64□□□□□ -1.03
PLB1YMR008C UBA3Q99344 299 aa8.64□□□□□ -1.03
PLB1YMR008C YLL053CP0CD98 152 aa8.64□□□□□ -1.03
PLB1YMR008C MCM1P11746 286 aa8.64□□□□□ -1.03
PLB1YMR008C MIR1P23641 311 aaKnown RBP8.64□□□□□ -1.03
PLB1YMR008C MID1P41821 548 aa8.64□□□□□ -1.03
PLB1YMR008C GWT1P47026 490 aa8.64□□□□□ -1.03
PLB1YMR008C YGL117WP53133 265 aa8.64□□□□□ -1.03
PLB1YMR008C PNC1P53184 216 aaKnown RBP8.64□□□□□ -1.03
PLB1YMR008C HOL1P53389 586 aa8.64□□□□□ -1.03
PLB1YMR008C REP2P03872 296 aa8.63□□□□□ -1.03
PLB1YMR008C YBR197CP38306 217 aa8.63□□□□□ -1.03
PLB1YMR008C SOK2P53438 785 aaPredicted RBP8.63□□□□□ -1.03
PLB1YMR008C ACT1P60010 375 aaKnown RBP8.63□□□□□ -1.03
PLB1YMR008C SRP1Q02821 542 aaKnown RBP8.63□□□□□ -1.03
PLB1YMR008C SPR28Q04921 423 aa8.63□□□□□ -1.03
PLB1YMR008C USB1Q12208 290 aaKnown RBP8.63□□□□□ -1.03
PLB1YMR008C Q0144Q9ZZW2 109 aa8.63□□□□□ -1.03
PLB1YMR008C CBP6P07253 162 aaPredicted RBP8.62□□□□□ -1.03
PLB1YMR008C RPD3P32561 433 aa8.62□□□□□ -1.03
PLB1YMR008C FAT1P38225 669 aa8.62□□□□□ -1.03
PLB1YMR008C THI74Q04083 370 aa8.62□□□□□ -1.03
PLB1YMR008C GAL1P04385 528 aa8.62□□□□□ -1.03
PLB1YMR008C QCR2P07257 368 aa8.62□□□□□ -1.03
PLB1YMR008C RIP1P08067 215 aa8.62□□□□□ -1.03
PLB1YMR008C IKS1P47042 667 aa8.62□□□□□ -1.03
PLB1YMR008C PHO23P50947 330 aa8.62□□□□□ -1.03
PLB1YMR008C MRPL19P53875 158 aa8.62□□□□□ -1.03
PLB1YMR008C EST3Q03096 181 aa8.62□□□□□ -1.03
PLB1YMR008C YDL180WQ12301 547 aa8.62□□□□□ -1.03
PLB1YMR008C IZH2Q12442 317 aa8.62□□□□□ -1.03
PLB1YMR008C PEX4P29340 183 aa8.61□□□□□ -1.03
PLB1YMR008C MGE1P38523 228 aa8.61□□□□□ -1.03
PLB1YMR008C YAP6Q03935 383 aa8.61□□□□□ -1.03
PLB1YMR008C YLR146W-AQ2V2P1 62 aa8.61□□□□□ -1.03
PLB1YMR008C SSA3P09435 649 aaKnown RBP8.61□□□□□ -1.03
PLB1YMR008C ARO3P14843 370 aaKnown RBP8.61□□□□□ -1.03
PLB1YMR008C OLE1P21147 510 aaKnown RBP8.61□□□□□ -1.03
PLB1YMR008C LDB16P25587 256 aa8.61□□□□□ -1.03
PLB1YMR008C LAG1P38703 411 aa8.61□□□□□ -1.03
PLB1YMR008C MTC6P38849 526 aa8.61□□□□□ -1.03
PLB1YMR008C ODC1Q03028 310 aa8.61□□□□□ -1.03
PLB1YMR008C BER1Q06688 274 aaKnown RBP8.61□□□□□ -1.03
PLB1YMR008C MED4Q12343 284 aa8.61□□□□□ -1.03
PLB1YMR008C YHR213W-AQ8TGT4 77 aa8.61□□□□□ -1.03
PLB1YMR008C CBT1P36038 271 aaPredicted RBP8.6□□□□□ -1.03
PLB1YMR008C MRPL39P36533 70 aa8.6□□□□□ -1.03
PLB1YMR008C SSN8P47821 323 aa8.6□□□□□ -1.03
PLB1YMR008C SRB7P47822 140 aa8.6□□□□□ -1.03
PLB1YMR008C SNN1P48232 102 aa8.6□□□□□ -1.03
PLB1YMR008C BUL1P48524 976 aa8.6□□□□□ -1.03
PLB1YMR008C YNR040WP53736 256 aa8.6□□□□□ -1.03
PLB1YMR008C ELA1P53861 379 aaPredicted RBP8.6□□□□□ -1.03
PLB1YMR008C YDL086WQ07505 273 aa8.6□□□□□ -1.03
PLB1YMR008C YCT1Q12235 531 aa8.6□□□□□ -1.03
PLB1YMR008C ISN1Q99312 450 aa8.6□□□□□ -1.03
PLB1YMR008C DEG1P31115 442 aaKnown RBP8.59□□□□□ -1.03
PLB1YMR008C REC114P32841 428 aa8.59□□□□□ -1.03
PLB1YMR008C GNP1P48813 663 aa8.59□□□□□ -1.03
PLB1YMR008C CWC25P53854 179 aaKnown RBP8.59□□□□□ -1.03
PLB1YMR008C ERV25P54837 211 aaKnown RBP8.59□□□□□ -1.03
PLB1YMR008C CAC2Q04199 468 aa8.59□□□□□ -1.03
PLB1YMR008C YOR186WQ08560 144 aa8.59□□□□□ -1.03
PLB1YMR008C OCH1P31755 480 aa8.59□□□□□ -1.03
PLB1YMR008C GLC7P32598 312 aaKnown RBP8.59□□□□□ -1.03
PLB1YMR008C STS1P38637 319 aa8.59□□□□□ -1.03
PLB1YMR008C AGX1P43567 385 aa8.59□□□□□ -1.03
PLB1YMR008C HAS1Q03532 505 aaKnown RBP8.59□□□□□ -1.03
PLB1YMR008C HRI1Q05905 244 aaKnown RBP8.59□□□□□ -1.03
PLB1YMR008C RFU1Q08003 200 aa8.59□□□□□ -1.03
PLB1YMR008C UBI4P0CG63 381 aaKnown RBP8.58□□□□□ -1.04
PLB1YMR008C RPL40AP0CH08 128 aaKnown RBP8.58□□□□□ -1.04
PLB1YMR008C RPL40BP0CH09 128 aaKnown RBP8.58□□□□□ -1.04
PLB1YMR008C SAG1P20840 650 aa8.58□□□□□ -1.04
PLB1YMR008C CNB1P25296 175 aa8.58□□□□□ -1.04
PLB1YMR008C MCH2P36032 473 aa8.58□□□□□ -1.04
PLB1YMR008C SWD2P36104 329 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms