RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C GPI12P23797 304 aa2.87□□□□□ -1.95
RPN13YLR421C IFM1P25038 676 aa2.87□□□□□ -1.95
RPN13YLR421C YCR101CP25607 182 aa2.87□□□□□ -1.95
RPN13YLR421C NAM9P27929 486 aa2.87□□□□□ -1.95
RPN13YLR421C MSN4P33749 630 aa2.87□□□□□ -1.95
RPN13YLR421C TIR2P33890 251 aa2.87□□□□□ -1.95
RPN13YLR421C RCK1P38622 512 aa2.87□□□□□ -1.95
RPN13YLR421C IKI1P38874 309 aa2.87□□□□□ -1.95
RPN13YLR421C RGI1P40043 161 aaPredicted RBP2.87□□□□□ -1.95
RPN13YLR421C YER085CP40058 173 aa2.87□□□□□ -1.95
RPN13YLR421C LSM4P40070 187 aaKnown RBP2.87□□□□□ -1.95
RPN13YLR421C PRE5P40302 234 aaKnown RBP2.87□□□□□ -1.95
RPN13YLR421C GLR1P41921 483 aaKnown RBP2.87□□□□□ -1.95
RPN13YLR421C IDP2P41939 412 aa2.87□□□□□ -1.95
RPN13YLR421C YCH1P42937 148 aa2.87□□□□□ -1.95
RPN13YLR421C NSE4P43124 402 aa2.87□□□□□ -1.95
RPN13YLR421C KEG1P43614 200 aa2.87□□□□□ -1.95
RPN13YLR421C YAE1P47118 141 aaPredicted RBP2.87□□□□□ -1.95
RPN13YLR421C MOG1P47123 218 aa2.87□□□□□ -1.95
RPN13YLR421C SNN1P48232 102 aa2.87□□□□□ -1.95
RPN13YLR421C ERV14P53173 138 aa2.87□□□□□ -1.95
RPN13YLR421C TIM21P53220 239 aa2.87□□□□□ -1.95
RPN13YLR421C RSM27P53305 110 aa2.87□□□□□ -1.95
RPN13YLR421C YNL134CP53912 376 aaKnown RBP2.87□□□□□ -1.95
RPN13YLR421C TDA1Q03533 586 aa2.87□□□□□ -1.95
RPN13YLR421C HPT1Q04178 221 aaKnown RBP2.87□□□□□ -1.95
RPN13YLR421C EMI1Q04406 187 aa2.87□□□□□ -1.95
RPN13YLR421C GPN3Q06543 272 aa2.87□□□□□ -1.95
RPN13YLR421C GAT3Q07928 141 aa2.87□□□□□ -1.95
RPN13YLR421C ZEO1Q08245 113 aa2.87□□□□□ -1.95
RPN13YLR421C SCP1Q08873 200 aa2.87□□□□□ -1.95
RPN13YLR421C UBA3Q99344 299 aa2.87□□□□□ -1.95
RPN13YLR421C RPS18AP0CX55 146 aaKnown RBP2.86□□□□□ -1.95
RPN13YLR421C RPS18BP0CX56 146 aaPredicted RBP2.86□□□□□ -1.95
RPN13YLR421C NHP6BP11633 99 aaKnown RBP2.86□□□□□ -1.95
RPN13YLR421C DEG1P31115 442 aaKnown RBP2.86□□□□□ -1.95
RPN13YLR421C MKK1P32490 508 aa2.86□□□□□ -1.95
RPN13YLR421C DOA4P32571 926 aa2.86□□□□□ -1.95
RPN13YLR421C CAT2P32796 670 aaKnown RBP2.86□□□□□ -1.95
RPN13YLR421C EMP24P32803 203 aaKnown RBP2.86□□□□□ -1.95
RPN13YLR421C LHP1P33399 275 aaKnown RBP2.86□□□□□ -1.95
RPN13YLR421C COS9P36034 407 aa2.86□□□□□ -1.95
RPN13YLR421C MIX23P38162 196 aa2.86□□□□□ -1.95
RPN13YLR421C RTC3P38804 111 aaPredicted RBP2.86□□□□□ -1.95
RPN13YLR421C AIM18P38884 321 aa2.86□□□□□ -1.95
RPN13YLR421C HPA3P39979 161 aa2.86□□□□□ -1.95
RPN13YLR421C PGD1P40356 397 aa2.86□□□□□ -1.95
RPN13YLR421C MPM1P40364 252 aa2.86□□□□□ -1.95
RPN13YLR421C SLM1P40485 686 aa2.86□□□□□ -1.95
RPN13YLR421C GDS1P41913 522 aa2.86□□□□□ -1.95
RPN13YLR421C YGR201CP42936 225 aa2.86□□□□□ -1.95
RPN13YLR421C OTU1P43558 301 aa2.86□□□□□ -1.95
RPN13YLR421C ATG18P43601 500 aa2.86□□□□□ -1.95
RPN13YLR421C MRX5P47007 382 aa2.86□□□□□ -1.95
RPN13YLR421C JHD2P47156 728 aaPredicted RBP2.86□□□□□ -1.95
RPN13YLR421C MCM22P47167 239 aa2.86□□□□□ -1.95
RPN13YLR421C SEH1P53011 349 aaKnown RBP2.86□□□□□ -1.95
RPN13YLR421C YGL159WP53110 370 aa2.86□□□□□ -1.95
RPN13YLR421C YGL039WP53183 348 aaKnown RBP2.86□□□□□ -1.95
RPN13YLR421C SWC4P53201 476 aa2.86□□□□□ -1.95
RPN13YLR421C IBD2P53892 351 aa2.86□□□□□ -1.95
RPN13YLR421C SPP2Q02521 185 aa2.86□□□□□ -1.95
RPN13YLR421C YHC1Q05900 231 aaKnown RBP2.86□□□□□ -1.95
RPN13YLR421C GAS2Q06135 555 aa2.86□□□□□ -1.95
RPN13YLR421C MFG1Q07684 458 aa2.86□□□□□ -1.95
RPN13YLR421C YOL131WQ08270 108 aa2.86□□□□□ -1.95
RPN13YLR421C YDL199CQ12407 687 aa2.86□□□□□ -1.95
RPN13YLR421C AHC1Q12433 566 aa2.86□□□□□ -1.95
RPN13YLR421C PSF1Q12488 208 aa2.86□□□□□ -1.95
RPN13YLR421C YCL021W-AQ96VH3 125 aa2.86□□□□□ -1.95
RPN13YLR421C GSC2P40989 1895 aa2.86□□□□□ -1.95
RPN13YLR421C YEL009C-AA0A023PZF2 135 aa2.85□□□□□ -1.95
RPN13YLR421C TDH3P00359 332 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
RPN13YLR421C ARG80P07249 177 aa2.85□□□□□ -1.95
RPN13YLR421C MRPL44P19956 98 aa2.85□□□□□ -1.95
RPN13YLR421C PUT3P25502 979 aaPredicted RBP2.85□□□□□ -1.95
RPN13YLR421C CDC50P25656 391 aa2.85□□□□□ -1.95
RPN13YLR421C HOM6P31116 359 aaKnown RBP2.85□□□□□ -1.95
RPN13YLR421C SFC1P33303 322 aa2.85□□□□□ -1.95
RPN13YLR421C SRP102P36057 244 aaPredicted RBP2.85□□□□□ -1.95
RPN13YLR421C PRS3P38689 320 aaKnown RBP2.85□□□□□ -1.95
RPN13YLR421C MTC6P38849 526 aa2.85□□□□□ -1.95
RPN13YLR421C NVJ1P38881 321 aa2.85□□□□□ -1.95
RPN13YLR421C RRG9P40156 214 aa2.85□□□□□ -1.95
RPN13YLR421C SWM2P40342 146 aa2.85□□□□□ -1.95
RPN13YLR421C ALG8P40351 577 aa2.85□□□□□ -1.95
RPN13YLR421C AYR1P40471 297 aa2.85□□□□□ -1.95
RPN13YLR421C PRM10P42946 383 aa2.85□□□□□ -1.95
RPN13YLR421C YNR062CP53748 327 aa2.85□□□□□ -1.95
RPN13YLR421C WSC2P53832 503 aa2.85□□□□□ -1.95
RPN13YLR421C IGO1P53897 168 aa2.85□□□□□ -1.95
RPN13YLR421C SNO1Q03144 224 aa2.85□□□□□ -1.95
RPN13YLR421C CCE1Q03702 353 aa2.85□□□□□ -1.95
RPN13YLR421C ATG38Q05789 226 aaKnown RBP2.85□□□□□ -1.95
RPN13YLR421C YLR446WQ06204 433 aa2.85□□□□□ -1.95
RPN13YLR421C RIF2Q06208 395 aa2.85□□□□□ -1.95
RPN13YLR421C CTS2Q06350 511 aa2.85□□□□□ -1.95
RPN13YLR421C SWC7Q06707 132 aa2.85□□□□□ -1.95
RPN13YLR421C NDE2Q07500 545 aa2.85□□□□□ -1.95
RPN13YLR421C RRP40Q08285 240 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 75.2 ms