RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C SRB4P32569 687 aa1.27□□□□□ -2.21
SGD1YLR336C FKS1P38631 1876 aaKnown RBP1.27□□□□□ -2.21
SGD1YLR336C LIA1P47120 325 aaKnown RBP1.27□□□□□ -2.21
SGD1YLR336C FAR8Q05040 523 aa1.27□□□□□ -2.21
SGD1YLR336C COX5AP00424 153 aa1.27□□□□□ -2.21
SGD1YLR336C RHO1P06780 209 aaKnown RBP1.27□□□□□ -2.21
SGD1YLR336C NTF2P33331 125 aaKnown RBP1.27□□□□□ -2.21
SGD1YLR336C COS8P38723 381 aa1.27□□□□□ -2.21
SGD1YLR336C MRPL49P40858 161 aaPredicted RBP1.27□□□□□ -2.21
SGD1YLR336C YJR149WP47177 404 aa1.27□□□□□ -2.21
SGD1YLR336C TOS8P53147 276 aa1.27□□□□□ -2.21
SGD1YLR336C Q0255P03881 472 aa1.26□□□□□ -2.21
SGD1YLR336C SNA3P14359 133 aa1.26□□□□□ -2.21
SGD1YLR336C MRPL25P23369 157 aa1.26□□□□□ -2.21
SGD1YLR336C YHR125WP38831 101 aa1.26□□□□□ -2.21
SGD1YLR336C RPC17P47076 161 aa1.26□□□□□ -2.21
SGD1YLR336C DAN1P47178 298 aa1.26□□□□□ -2.21
SGD1YLR336C TRM9P49957 279 aa1.26□□□□□ -2.21
SGD1YLR336C SCM4P32564 187 aa1.26□□□□□ -2.21
SGD1YLR336C VPS21P36017 210 aaKnown RBP1.26□□□□□ -2.21
SGD1YLR336C YHL026CP38740 315 aa1.26□□□□□ -2.21
SGD1YLR336C RTR1P40084 226 aaPredicted RBP1.26□□□□□ -2.21
SGD1YLR336C ARC15P40518 154 aaRIP-Chip data1.26□□□□□ -2.21not detected
SGD1YLR336C CGI121Q03705 181 aaKnown RBP1.26□□□□□ -2.21
SGD1YLR336C INM2Q05533 292 aa1.26□□□□□ -2.21
SGD1YLR336C IPP1P00817 287 aaKnown RBP1.25□□□□□ -2.21
SGD1YLR336C DSF1P0CX08 502 aa1.25□□□□□ -2.21
SGD1YLR336C YNR073CP0CX09 502 aa1.25□□□□□ -2.21
SGD1YLR336C CCA1P21269 546 aa1.25□□□□□ -2.21
SGD1YLR336C CDC10P25342 322 aaKnown RBP1.25□□□□□ -2.21
SGD1YLR336C YMR144WP40214 342 aaKnown RBP1.25□□□□□ -2.21
SGD1YLR336C RPA43P46669 326 aa1.25□□□□□ -2.21
SGD1YLR336C SNX4P47057 423 aa1.25□□□□□ -2.21
SGD1YLR336C GTR2P53290 341 aa1.25□□□□□ -2.21
SGD1YLR336C DCR2Q05924 578 aa1.25□□□□□ -2.21
SGD1YLR336C DNA2P38859 1522 aa1.25□□□□□ -2.21
SGD1YLR336C CUE1P38428 203 aa1.25□□□□□ -2.21
SGD1YLR336C CAT5P41735 233 aa1.25□□□□□ -2.21
SGD1YLR336C TIM11P81449 96 aaPredicted RBP1.25□□□□□ -2.21
SGD1YLR336C RNH1Q04740 348 aa1.25□□□□□ -2.21
SGD1YLR336C NIP7Q08962 181 aaKnown RBP1.25□□□□□ -2.21
SGD1YLR336C THP2O13539 261 aaKnown RBP1.24□□□□□ -2.21
SGD1YLR336C ARG80P07249 177 aa1.24□□□□□ -2.21
SGD1YLR336C MIC12P38341 106 aa1.24□□□□□ -2.21
SGD1YLR336C RTC3P38804 111 aaPredicted RBP1.24□□□□□ -2.21
SGD1YLR336C MNN5P46982 586 aa1.24□□□□□ -2.21
SGD1YLR336C MCM22P47167 239 aa1.24□□□□□ -2.21
SGD1YLR336C YPT52P36018 234 aaKnown RBP1.24□□□□□ -2.21
SGD1YLR336C YOR062CP36025 268 aa1.24□□□□□ -2.21
SGD1YLR336C URA8P38627 578 aaPredicted RBP1.24□□□□□ -2.21
SGD1YLR336C GRE3P38715 327 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
SGD1YLR336C FCY21P40039 528 aa1.24□□□□□ -2.21
SGD1YLR336C YPL257WQ08974 193 aa1.24□□□□□ -2.21
SGD1YLR336C HTL1Q9URQ5 78 aa1.24□□□□□ -2.21
SGD1YLR336C SIR4P11978 1358 aa1.24□□□□□ -2.21
SGD1YLR336C SRY1P36007 326 aa1.24□□□□□ -2.21
SGD1YLR336C PEX17P40155 199 aa1.24□□□□□ -2.21
SGD1YLR336C OTU1P43558 301 aa1.24□□□□□ -2.21
SGD1YLR336C AKR2Q12013 749 aa1.24□□□□□ -2.21
SGD1YLR336C EMC6Q12431 108 aa1.24□□□□□ -2.21
SGD1YLR336C BCY1P07278 416 aaKnown RBP1.23□□□□□ -2.21
SGD1YLR336C YMR31P19955 123 aa1.23□□□□□ -2.21
SGD1YLR336C VMA6P32366 345 aaKnown RBP1.23□□□□□ -2.21
SGD1YLR336C BMH2P34730 273 aaKnown RBP1.23□□□□□ -2.21
SGD1YLR336C RPF1P38805 295 aaKnown RBP1.23□□□□□ -2.21
SGD1YLR336C YJL027CP47063 138 aaPredicted RBP1.23□□□□□ -2.21
SGD1YLR336C ALG13P53178 202 aa1.23□□□□□ -2.21
SGD1YLR336C ERV29P53337 310 aa1.23□□□□□ -2.21
SGD1YLR336C ATG39Q06159 398 aa1.23□□□□□ -2.21
SGD1YLR336C SIN3P22579 1536 aa1.23□□□□□ -2.21
SGD1YLR336C PPA2P28239 310 aa1.23□□□□□ -2.21
SGD1YLR336C DOA4P32571 926 aa1.23□□□□□ -2.21
SGD1YLR336C RIB1P38066 345 aa1.23□□□□□ -2.21
SGD1YLR336C FIS1P40515 155 aa1.23□□□□□ -2.21
SGD1YLR336C MSS2P40990 351 aa1.23□□□□□ -2.21
SGD1YLR336C RMR1P53060 241 aa1.23□□□□□ -2.21
SGD1YLR336C CDC123Q05791 360 aa1.23□□□□□ -2.21
SGD1YLR336C TPO4Q12256 659 aa1.23□□□□□ -2.21
SGD1YLR336C YHR086W-AQ3E746 53 aa1.23□□□□□ -2.21
SGD1YLR336C SPT3P06844 337 aa1.22□□□□□ -2.21
SGD1YLR336C ECM33P38248 429 aaKnown RBP1.22□□□□□ -2.21
SGD1YLR336C NSA1P53136 463 aaPredicted RBP1.22□□□□□ -2.21
SGD1YLR336C YMR279CQ03263 540 aa1.22□□□□□ -2.21
SGD1YLR336C MHT1Q12525 324 aa1.22□□□□□ -2.21
SGD1YLR336C RPL24BP24000 155 aaKnown RBP1.22□□□□□ -2.21
SGD1YLR336C VMA11P32842 164 aa1.22□□□□□ -2.21
SGD1YLR336C YGR026WP53217 278 aa1.22□□□□□ -2.21
SGD1YLR336C YML096WQ04489 525 aa1.22□□□□□ -2.21
SGD1YLR336C YOR283WQ12040 230 aaKnown RBP1.22□□□□□ -2.21
SGD1YLR336C RAS2P01120 322 aaKnown RBP1.21□□□□□ -2.22
SGD1YLR336C FCY2P17064 533 aa1.21□□□□□ -2.22
SGD1YLR336C GRX2P17695 143 aaKnown RBP1.21□□□□□ -2.22
SGD1YLR336C PBN1P25580 416 aa1.21□□□□□ -2.22
SGD1YLR336C NRG2P38082 220 aa1.21□□□□□ -2.22
SGD1YLR336C ERG28P40030 148 aa1.21□□□□□ -2.22
SGD1YLR336C HAM1P47119 197 aaKnown RBP1.21□□□□□ -2.22
SGD1YLR336C YKL183C-AQ3E765 70 aa1.21□□□□□ -2.22
SGD1YLR336C YOR020W-AQ3E824 90 aa1.21□□□□□ -2.22
SGD1YLR336C IRC20Q06554 1556 aa1.21□□□□□ -2.22
SGD1YLR336C YBR063CP38083 404 aa1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms