RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B BRR2P32639 2163 aaKnown RBP2.9□□□□□ -1.94
YLR227W-BYLR227W-B YSR3P23501 404 aa2.9□□□□□ -1.94
YLR227W-BYLR227W-B THI80P35202 319 aa2.9□□□□□ -1.94
YLR227W-BYLR227W-B DIA1P54005 336 aa2.9□□□□□ -1.94
YLR227W-BYLR227W-B FRE6Q12473 712 aa2.9□□□□□ -1.94
YLR227W-BYLR227W-B PHO91P27514 894 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B PMU1P36069 295 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B BDH2P39713 417 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B CTK1Q03957 528 aaKnown RBP2.9□□□□□ -1.95
YLR227W-BYLR227W-B ELP6Q04868 273 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B ERP1Q05359 219 aaKnown RBP2.9□□□□□ -1.95
YLR227W-BYLR227W-B PMR1P13586 950 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B RAD14P28519 371 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B ERG3P32353 365 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B RPL13BP40212 199 aaKnown RBP2.9□□□□□ -1.95
YLR227W-BYLR227W-B YGL176CP46945 554 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B ALY2P47029 1046 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B RRT8Q08219 342 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B YLR053CQ12026 108 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B RPL13AQ12690 199 aaPredicted RBP2.9□□□□□ -1.95
YLR227W-BYLR227W-B DFM1Q12743 341 aaKnown RBP2.9□□□□□ -1.95
YLR227W-BYLR227W-B ENA1P13587 1091 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B MEK1P24719 497 aaPredicted RBP2.9□□□□□ -1.95
YLR227W-BYLR227W-B OCA4P25366 362 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B PRS1P32895 427 aaKnown RBP2.9□□□□□ -1.95
YLR227W-BYLR227W-B DCI1Q08558 271 aa2.9□□□□□ -1.95
YLR227W-BYLR227W-B FAR1P21268 830 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B CNE1P27825 502 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B RMI1Q02685 241 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B YMR317WQ04893 1140 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B VIK1Q12045 647 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B CYC1P00044 109 aaPredicted RBP2.89□□□□□ -1.95
YLR227W-BYLR227W-B NHP6BP11633 99 aaKnown RBP2.89□□□□□ -1.95
YLR227W-BYLR227W-B VPH2P32341 215 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B ECM1P39715 212 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B ECM9Q02202 377 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B CTL1Q03220 320 aaKnown RBP2.89□□□□□ -1.95
YLR227W-BYLR227W-B CSN9Q03981 162 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B RPL39P04650 51 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B RPC40P07703 335 aaKnown RBP2.89□□□□□ -1.95
YLR227W-BYLR227W-B OAC1P32332 324 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B PDC2P32896 925 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B CMC1P36064 111 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B FLO10P36170 1169 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B MRPL24P36525 258 aaPredicted RBP2.89□□□□□ -1.95
YLR227W-BYLR227W-B VMA7P39111 118 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B TIS11P47977 285 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B YGR042WP53227 271 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B RPL21AQ02753 160 aaKnown RBP2.89□□□□□ -1.95
YLR227W-BYLR227W-B SHR3Q02774 210 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B YLR224WQ05947 369 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B RPL21BQ12672 160 aaKnown RBP2.89□□□□□ -1.95
YLR227W-BYLR227W-B RPS21BQ3E754 87 aaKnown RBP2.89□□□□□ -1.95
YLR227W-BYLR227W-B FUR4P05316 633 aaKnown RBP2.89□□□□□ -1.95
YLR227W-BYLR227W-B PRE9P23638 258 aaKnown RBP2.89□□□□□ -1.95
YLR227W-BYLR227W-B VPS74Q06385 345 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B ARV1Q06541 321 aa2.89□□□□□ -1.95
YLR227W-BYLR227W-B RPL9AP05738 191 aaKnown RBP2.88□□□□□ -1.95
YLR227W-BYLR227W-B YNL095CP53932 642 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B RPS2P25443 254 aaKnown RBP2.88□□□□□ -1.95
YLR227W-BYLR227W-B TEM1P38987 245 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B AIM2P39721 246 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B YEA4P40004 342 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B CUS2P53830 285 aaPredicted RBP2.88□□□□□ -1.95
YLR227W-BYLR227W-B YPL264CQ08980 353 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B UTP23Q12339 254 aaKnown RBP2.88□□□□□ -1.95
YLR227W-BYLR227W-B YMR105W-AQ8TGS8 64 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B YCR051WP25631 222 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B UTP11P34247 250 aaPredicted RBP2.88□□□□□ -1.95
YLR227W-BYLR227W-B MSG5P38590 489 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B YGL185CP53100 379 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B BNA7Q04066 261 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B SCW10Q04951 389 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B YBL112CQ3E7Y4 105 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B KSH1Q8TGJ3 72 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B PUT1P09368 476 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B PEP8P40335 379 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B VHT1P53241 593 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B VPS75P53853 264 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B MRX9Q07349 420 aaKnown RBP2.88□□□□□ -1.95
YLR227W-BYLR227W-B AVO1Q08236 1176 aa2.88□□□□□ -1.95
YLR227W-BYLR227W-B DFR1P07807 211 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
YLR227W-BYLR227W-B ELF1P36053 145 aa2.87□□□□□ -1.95
YLR227W-BYLR227W-B FMC1P40491 155 aa2.87□□□□□ -1.95
YLR227W-BYLR227W-B BUD20Q08004 166 aaPredicted RBP2.87□□□□□ -1.95
YLR227W-BYLR227W-B TOR2P32600 2474 aaKnown RBP2.87□□□□□ -1.95
YLR227W-BYLR227W-B SHE2P36068 246 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
YLR227W-BYLR227W-B AGE2P40529 298 aa2.87□□□□□ -1.95
YLR227W-BYLR227W-B FIN1Q03898 291 aa2.87□□□□□ -1.95
YLR227W-BYLR227W-B HNT1Q04344 158 aaKnown RBP2.87□□□□□ -1.95
YLR227W-BYLR227W-B BCP1Q06338 283 aa2.87□□□□□ -1.95
YLR227W-BYLR227W-B YPL150WQ12152 901 aa2.87□□□□□ -1.95
YLR227W-BYLR227W-B OCA6Q12454 224 aa2.87□□□□□ -1.95
YLR227W-BYLR227W-B IMA3P0CW40 589 aa2.87□□□□□ -1.95
YLR227W-BYLR227W-B IMA4P0CW41 589 aa2.87□□□□□ -1.95
YLR227W-BYLR227W-B YKL063CP35725 167 aa2.87□□□□□ -1.95
YLR227W-BYLR227W-B NUP57P48837 541 aa2.87□□□□□ -1.95
YLR227W-BYLR227W-B IMA2Q08295 589 aa2.87□□□□□ -1.95
YLR227W-BYLR227W-B MCT1Q12283 360 aa2.87□□□□□ -1.95
YLR227W-BYLR227W-B ATO3Q12359 275 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms