RNA–Protein interactions for RNA: YLR193C

UPS1, Transcript of Phosphatidic acid transfer protein, yeast

Gene UPS1, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPS1	YLR193C	COX5A	P00424	153 aa		0.82	□□□□□ -2.28
UPS1	YLR193C	YHR127W	P38833	243 aa	Known RBP	0.82	□□□□□ -2.28
UPS1	YLR193C	HOC1	P47124	396 aa		0.82	□□□□□ -2.28
UPS1	YLR193C	YJR079W	P47126	109 aa		0.82	□□□□□ -2.28
UPS1	YLR193C	GTR2	P53290	341 aa		0.82	□□□□□ -2.28
UPS1	YLR193C	YNL046W	P53956	172 aa		0.82	□□□□□ -2.28
UPS1	YLR193C	PRM15	Q03262	622 aa		0.82	□□□□□ -2.28
UPS1	YLR193C	INM2	Q05533	292 aa		0.82	□□□□□ -2.28
UPS1	YLR193C	YPR172W	Q06608	200 aa		0.82	□□□□□ -2.28
UPS1	YLR193C	PAM18	Q07914	168 aa		0.82	□□□□□ -2.28
UPS1	YLR193C	IPP1	P00817	287 aa	Known RBP	0.81	□□□□□ -2.28
UPS1	YLR193C	RPS5	P26783	225 aa	Known RBP	0.81	□□□□□ -2.28
UPS1	YLR193C	VMA11	P32842	164 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	YKL075C	P36083	450 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	CTR2	P38865	189 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	YER135C	P40082	130 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	PEP8	P40335	379 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	RMR1	P53060	241 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	YGR026W	P53217	278 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	MRPL50	P53724	139 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	RRN5	Q02983	363 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	YMR279C	Q03263	540 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	SEI1	Q06058	285 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	MSA1	Q08471	629 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	YPL257W	Q08974	193 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	AKR2	Q12013	749 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	YLR126C	Q12288	251 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	MED4	Q12343	284 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	ATO3	Q12359	275 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	YPL229W	Q99395	206 aa		0.81	□□□□□ -2.28
UPS1	YLR193C	UBR2	Q07963	1872 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	YHR139C-A	O13536	103 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	RAS2	P01120	322 aa	Known RBP	0.8	□□□□□ -2.28
UPS1	YLR193C	CDC7	P06243	507 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	DSF1	P0CX08	502 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	YNR073C	P0CX09	502 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	ERD2	P18414	219 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	YPT52	P36018	234 aa	Known RBP	0.8	□□□□□ -2.28
UPS1	YLR193C	LDB7	P38210	180 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	DOG1	P38774	246 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	YMR144W	P40214	342 aa	Known RBP	0.8	□□□□□ -2.28
UPS1	YLR193C	FMC1	P40491	155 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	FIS1	P40515	155 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	CAT5	P41735	233 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	SRL4	Q03085	281 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	KRE28	Q04431	385 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	ATG39	Q06159	398 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	NIP7	Q08962	181 aa	Known RBP	0.8	□□□□□ -2.28
UPS1	YLR193C	HTL1	Q9URQ5	78 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	SIR4	P11978	1358 aa		0.8	□□□□□ -2.28
UPS1	YLR193C	MATALPHA1	P0CY06	175 aa		0.79	□□□□□ -2.28
UPS1	YLR193C	HMLALPHA1	P0CY07	175 aa		0.79	□□□□□ -2.28
UPS1	YLR193C	SNA3	P14359	133 aa		0.79	□□□□□ -2.28
UPS1	YLR193C	FBA1	P14540	359 aa	Known RBP	0.79	□□□□□ -2.28
UPS1	YLR193C	FCY2	P17064	533 aa		0.79	□□□□□ -2.28
UPS1	YLR193C	RPO26	P20435	155 aa		0.79	□□□□□ -2.28
UPS1	YLR193C	SCL1	P21243	252 aa	Known RBP	0.79	□□□□□ -2.28
UPS1	YLR193C	MRPL25	P23369	157 aa		0.79	□□□□□ -2.28
UPS1	YLR193C	YCR016W	P25617	290 aa	Known RBP	0.79	□□□□□ -2.28
UPS1	YLR193C	RPF1	P38805	295 aa	Known RBP	0.79	□□□□□ -2.28
UPS1	YLR193C	RPA43	P46669	326 aa		0.79	□□□□□ -2.28
UPS1	YLR193C	HAM1	P47119	197 aa	Known RBP	0.79	□□□□□ -2.28
UPS1	YLR193C	YGR219W	P53307	113 aa		0.79	□□□□□ -2.28
UPS1	YLR193C	PET117	Q02771	107 aa		0.79	□□□□□ -2.28
UPS1	YLR193C	MRPS8	Q03799	155 aa		0.79	□□□□□ -2.28
UPS1	YLR193C	CFT1	Q06632	1357 aa	Known RBP	0.79	□□□□□ -2.28
UPS1	YLR193C	MSW1	P04803	379 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	RPL9A	P05738	191 aa	Known RBP	0.78	□□□□□ -2.28
UPS1	YLR193C	GRX2	P17695	143 aa	Known RBP	0.78	□□□□□ -2.28
UPS1	YLR193C	CDC10	P25342	322 aa	Known RBP	0.78	□□□□□ -2.28
UPS1	YLR193C	PEX4	P29340	183 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.78	□□□□□ -2.28	not detected
UPS1	YLR193C	SRB4	P32569	687 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	MSN4	P33749	630 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	RIB1	P38066	345 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	YBR063C	P38083	404 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	ECM33	P38248	429 aa	Known RBP	0.78	□□□□□ -2.28
UPS1	YLR193C	CUE1	P38428	203 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	YAR068W	P39564	161 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	YIL001W	P40560	513 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	CIS3	P47001	227 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	YJR056C	P47115	236 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	ILM1	P47155	203 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	YJR149W	P47177	404 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	TRM9	P49957	279 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	RPL9B	P51401	191 aa	Known RBP	0.78	□□□□□ -2.28
UPS1	YLR193C	NUP84	P52891	726 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	TOS8	P53147	276 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	YLR283W	Q05867	314 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	NEJ1	Q06148	342 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	ARR2	Q06597	130 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	HEM25	Q07534	307 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	YOR020W-A	Q3E824	90 aa		0.78	□□□□□ -2.28
UPS1	YLR193C	YOL162W	P0CF19	215 aa		0.77	□□□□□ -2.29
UPS1	YLR193C	OAC1	P32332	324 aa		0.77	□□□□□ -2.29
UPS1	YLR193C	NTF2	P33331	125 aa	Known RBP	0.77	□□□□□ -2.29
UPS1	YLR193C	PHO88	P38264	188 aa	Predicted RBP	0.77	□□□□□ -2.29
UPS1	YLR193C	ERV15	P38312	142 aa		0.77	□□□□□ -2.29
UPS1	YLR193C	YHR022C	P38763	256 aa		0.77	□□□□□ -2.29
UPS1	YLR193C	YHR180W	P38868	163 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms