RNA–Protein interactions for RNA: YLR171W

YLR171W, Transcript of Dubious open reading frame, yeast

Gene YLR171W, Length 390 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR171W	YLR171W	YIL001W	P40560	513 aa		0.71	□□□□□ -2.3
YLR171W	YLR171W	JHD2	P47156	728 aa	Predicted RBP	0.71	□□□□□ -2.3
YLR171W	YLR171W	ATG17	Q06410	417 aa		0.71	□□□□□ -2.3
YLR171W	YLR171W	HEM25	Q07534	307 aa		0.71	□□□□□ -2.3
YLR171W	YLR171W	YKR104W	P0CE69	306 aa		0.7	□□□□□ -2.3
YLR171W	YLR171W	GRX2	P17695	143 aa	Known RBP	0.7	□□□□□ -2.3
YLR171W	YLR171W	EHD3	P28817	500 aa		0.7	□□□□□ -2.3
YLR171W	YLR171W	MRX3	P38172	270 aa		0.7	□□□□□ -2.3
YLR171W	YLR171W	TCD1	P38756	429 aa		0.7	□□□□□ -2.3
YLR171W	YLR171W	TOS8	P53147	276 aa		0.7	□□□□□ -2.3
YLR171W	YLR171W	ATG39	Q06159	398 aa		0.7	□□□□□ -2.3
YLR171W	YLR171W	COQ10	Q08058	207 aa		0.7	□□□□□ -2.3
YLR171W	YLR171W	YPL257W	Q08974	193 aa		0.7	□□□□□ -2.3
YLR171W	YLR171W	SSK22	P25390	1331 aa	Predicted RBP	0.69	□□□□□ -2.3
YLR171W	YLR171W	GPA2	P10823	449 aa		0.69	□□□□□ -2.3
YLR171W	YLR171W	DBP3	P20447	523 aa	Known RBP	0.69	□□□□□ -2.3
YLR171W	YLR171W	JEN1	P36035	616 aa		0.69	□□□□□ -2.3
YLR171W	YLR171W	RPL37A	P49166	88 aa	Known RBP	0.69	□□□□□ -2.3
YLR171W	YLR171W	YPR172W	Q06608	200 aa		0.69	□□□□□ -2.3
YLR171W	YLR171W	YOR186W	Q08560	144 aa		0.69	□□□□□ -2.3
YLR171W	YLR171W	VAR1	P02381	398 aa		0.68	□□□□□ -2.3
YLR171W	YLR171W	CPA1	P07258	411 aa	Known RBP	0.68	□□□□□ -2.3
YLR171W	YLR171W	QCR8	P08525	94 aa		0.68	□□□□□ -2.3
YLR171W	YLR171W	SNA3	P14359	133 aa		0.68	□□□□□ -2.3
YLR171W	YLR171W	THO1	P40040	218 aa	Known RBP	0.68	□□□□□ -2.3
YLR171W	YLR171W	RMR1	P53060	241 aa		0.68	□□□□□ -2.3
YLR171W	YLR171W	KAP114	P53067	1004 aa		0.68	□□□□□ -2.3
YLR171W	YLR171W	RRP40	Q08285	240 aa	Known RBP	0.68	□□□□□ -2.3
YLR171W	YLR171W	YIL002W-A	Q3E7Z5	69 aa		0.68	□□□□□ -2.3
YLR171W	YLR171W	YPT52	P36018	234 aa	Known RBP	0.67	□□□□□ -2.3
YLR171W	YLR171W	MRPL39	P36533	70 aa		0.67	□□□□□ -2.3
YLR171W	YLR171W	SNZ2	P53824	298 aa		0.67	□□□□□ -2.3
YLR171W	YLR171W	SPG4	Q04438	115 aa		0.67	□□□□□ -2.3
YLR171W	YLR171W	RRS1	Q08746	203 aa	Known RBP	0.67	□□□□□ -2.3
YLR171W	YLR171W	SSA3	P09435	649 aa	Known RBP	0.66	□□□□□ -2.3
YLR171W	YLR171W	PRS2	P38620	318 aa	Known RBP	0.66	□□□□□ -2.3
YLR171W	YLR171W	SMB1	P40018	196 aa	Known RBP	0.66	□□□□□ -2.3
YLR171W	YLR171W	IPP1	P00817	287 aa	Known RBP	0.65	□□□□□ -2.31
YLR171W	YLR171W	YBR096W	P38256	230 aa		0.65	□□□□□ -2.31
YLR171W	YLR171W	RPL33B	P41056	107 aa	Known RBP	0.65	□□□□□ -2.31
YLR171W	YLR171W	MPA43	P53583	542 aa	Predicted RBP	0.65	□□□□□ -2.31
YLR171W	YLR171W	ALG11	P53954	548 aa	Known RBP	0.65	□□□□□ -2.31
YLR171W	YLR171W	YPR098C	Q06089	161 aa		0.65	□□□□□ -2.31
YLR171W	YLR171W	HTL1	Q9URQ5	78 aa		0.65	□□□□□ -2.31
YLR171W	YLR171W	SGE1	P33335	543 aa		0.64	□□□□□ -2.31
YLR171W	YLR171W	GOS1	P38736	223 aa		0.64	□□□□□ -2.31
YLR171W	YLR171W	YAR068W	P39564	161 aa		0.64	□□□□□ -2.31
YLR171W	YLR171W	TIR3	P40552	269 aa		0.64	□□□□□ -2.31
YLR171W	YLR171W	EGD1	Q02642	157 aa	Known RBP	0.64	□□□□□ -2.31
YLR171W	YLR171W	NIP7	Q08962	181 aa	Known RBP	0.64	□□□□□ -2.31
YLR171W	YLR171W	TPO4	Q12256	659 aa		0.64	□□□□□ -2.31
YLR171W	YLR171W	MRP1	P10662	321 aa	Known RBP	0.63	□□□□□ -2.31
YLR171W	YLR171W	HOM6	P31116	359 aa	Known RBP	0.63	□□□□□ -2.31
YLR171W	YLR171W	RPA43	P46669	326 aa		0.63	□□□□□ -2.31
YLR171W	YLR171W	YJR056C	P47115	236 aa		0.63	□□□□□ -2.31
YLR171W	YLR171W	YNL046W	P53956	172 aa		0.63	□□□□□ -2.31
YLR171W	YLR171W	YCT1	Q12235	531 aa		0.63	□□□□□ -2.31
YLR171W	YLR171W	COX2	P00410	251 aa		0.62	□□□□□ -2.31
YLR171W	YLR171W	YER188C-A	P0C0V2	99 aa		0.62	□□□□□ -2.31
YLR171W	YLR171W	FZF1	P32805	299 aa		0.62	□□□□□ -2.31
YLR171W	YLR171W	ECM33	P38248	429 aa	Known RBP	0.62	□□□□□ -2.31
YLR171W	YLR171W	RPF1	P38805	295 aa	Known RBP	0.62	□□□□□ -2.31
YLR171W	YLR171W	UBC7	Q02159	165 aa		0.62	□□□□□ -2.31
YLR171W	YLR171W	CYR1	P08678	2026 aa	Known RBP	0.62	□□□□□ -2.31
YLR171W	YLR171W	FCY2	P17064	533 aa		0.61	□□□□□ -2.31
YLR171W	YLR171W	MEI4	P29467	408 aa		0.61	□□□□□ -2.31
YLR171W	YLR171W	GLG2	P47011	380 aa		0.61	□□□□□ -2.31
YLR171W	YLR171W	RPL37B	P51402	88 aa	Known RBP	0.61	□□□□□ -2.31
YLR171W	YLR171W	BOL2	P53082	120 aa		0.61	□□□□□ -2.31
YLR171W	YLR171W	YDR209C	Q03480	137 aa		0.61	□□□□□ -2.31
YLR171W	YLR171W	YPL162C	Q12042	273 aa		0.61	□□□□□ -2.31
YLR171W	YLR171W	YOR020W-A	Q3E824	90 aa		0.61	□□□□□ -2.31
YLR171W	YLR171W	RSR1	P13856	272 aa		0.6	□□□□□ -2.31
YLR171W	YLR171W	DAL80	P26343	269 aa		0.6	□□□□□ -2.31
YLR171W	YLR171W	YNL217W	P40152	326 aa		0.6	□□□□□ -2.31
YLR171W	YLR171W	COX20	Q04935	205 aa		0.6	□□□□□ -2.31
YLR171W	YLR171W	MSA1	Q08471	629 aa		0.6	□□□□□ -2.31
YLR171W	YLR171W	CDC8	P00572	216 aa		0.59	□□□□□ -2.31
YLR171W	YLR171W	DAL82	P21705	255 aa		0.59	□□□□□ -2.31
YLR171W	YLR171W	TMA19	P35691	167 aa	Known RBP	0.59	□□□□□ -2.31
YLR171W	YLR171W	KDX1	P36005	433 aa		0.59	□□□□□ -2.31
YLR171W	YLR171W	YER076C	P40049	302 aa		0.59	□□□□□ -2.31
YLR171W	YLR171W	HUA1	P40325	198 aa		0.59	□□□□□ -2.31
YLR171W	YLR171W	ICE2	P40499	491 aa		0.59	□□□□□ -2.31
YLR171W	YLR171W	SPG3	Q04398	127 aa	Predicted RBP	0.59	□□□□□ -2.31
YLR171W	YLR171W	ADH6	Q04894	360 aa	Known RBP	0.59	□□□□□ -2.31
YLR171W	YLR171W	RPL27B	P0C2H7	136 aa	Known RBP	0.58	□□□□□ -2.32
YLR171W	YLR171W	RPS5	P26783	225 aa	Known RBP	0.58	□□□□□ -2.32
YLR171W	YLR171W	YBR063C	P38083	404 aa		0.58	□□□□□ -2.32
YLR171W	YLR171W	PGD1	P40356	397 aa		0.58	□□□□□ -2.32
YLR171W	YLR171W	HAM1	P47119	197 aa	Known RBP	0.58	□□□□□ -2.32
YLR171W	YLR171W	EMC2	P47133	292 aa	Known RBP	0.58	□□□□□ -2.32
YLR171W	YLR171W	USE1	P53146	245 aa		0.58	□□□□□ -2.32
YLR171W	YLR171W	RHO3	Q00245	231 aa	Known RBP	0.58	□□□□□ -2.32
YLR171W	YLR171W	RPL24A	P04449	155 aa	Known RBP	0.57	□□□□□ -2.32
YLR171W	YLR171W	POL30	P15873	258 aa	Known RBP	0.57	□□□□□ -2.32
YLR171W	YLR171W	ERD2	P18414	219 aa		0.57	□□□□□ -2.32
YLR171W	YLR171W	GAA1	P39012	614 aa		0.57	□□□□□ -2.32
YLR171W	YLR171W	YRB2	P40517	327 aa		0.57	□□□□□ -2.32
YLR171W	YLR171W	CAT5	P41735	233 aa		0.57	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms