RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W VMA5P31412 392 aaKnown RBP6.54□□□□□ -1.36
SNF7YLR025W ERG3P32353 365 aa6.54□□□□□ -1.36
SNF7YLR025W LAG1P38703 411 aa6.54□□□□□ -1.36
SNF7YLR025W CUP9P41817 306 aa6.54□□□□□ -1.36
SNF7YLR025W GNA1P43577 159 aaPredicted RBP6.54□□□□□ -1.36
SNF7YLR025W YGR126WP53274 230 aa6.54□□□□□ -1.36
SNF7YLR025W BSC5P53755 489 aa6.54□□□□□ -1.36
SNF7YLR025W ERV25P54837 211 aaKnown RBP6.54□□□□□ -1.36
SNF7YLR025W YPL039WQ03080 316 aa6.54□□□□□ -1.36
SNF7YLR025W HEM25Q07534 307 aa6.54□□□□□ -1.36
SNF7YLR025W HMS1Q12398 434 aa6.54□□□□□ -1.36
SNF7YLR025W POL2P21951 2222 aaKnown RBP6.53□□□□□ -1.36
SNF7YLR025W PUT1P09368 476 aa6.53□□□□□ -1.36
SNF7YLR025W PDX1P16451 410 aa6.53□□□□□ -1.36
SNF7YLR025W ZRC1P20107 442 aa6.53□□□□□ -1.36
SNF7YLR025W MCM10P32354 571 aa6.53□□□□□ -1.36
SNF7YLR025W MTC7P32633 139 aa6.53□□□□□ -1.36
SNF7YLR025W MRPL27P36526 146 aaPredicted RBP6.53□□□□□ -1.36
SNF7YLR025W POP8P38208 133 aa6.53□□□□□ -1.36
SNF7YLR025W GRE3P38715 327 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
SNF7YLR025W ASP1P38986 381 aaPredicted RBP6.53□□□□□ -1.36
SNF7YLR025W GCV3P39726 170 aaPredicted RBP6.53□□□□□ -1.36
SNF7YLR025W YER010CP40011 234 aa6.53□□□□□ -1.36
SNF7YLR025W URM1P40554 99 aaPredicted RBP6.53□□□□□ -1.36
SNF7YLR025W YJR111CP47148 283 aaKnown RBP6.53□□□□□ -1.36
SNF7YLR025W PKP2P53170 491 aa6.53□□□□□ -1.36
SNF7YLR025W OKP1P53298 406 aa6.53□□□□□ -1.36
SNF7YLR025W HOL1P53389 586 aa6.53□□□□□ -1.36
SNF7YLR025W RNH201P53942 307 aa6.53□□□□□ -1.36
SNF7YLR025W SCP1Q08873 200 aa6.53□□□□□ -1.36
SNF7YLR025W YRA1Q12159 226 aaKnown RBP6.53□□□□□ -1.36
SNF7YLR025W VAM3Q12241 283 aa6.53□□□□□ -1.36
SNF7YLR025W YLR146W-AQ2V2P1 62 aa6.53□□□□□ -1.36
SNF7YLR025W CPR4P25334 318 aa6.52□□□□□ -1.37
SNF7YLR025W SRY1P36007 326 aa6.52□□□□□ -1.37
SNF7YLR025W REE1P40893 198 aa6.52□□□□□ -1.37
SNF7YLR025W GLR1P41921 483 aaKnown RBP6.52□□□□□ -1.37
SNF7YLR025W SNN1P48232 102 aa6.52□□□□□ -1.37
SNF7YLR025W PNC1P53184 216 aaKnown RBP6.52□□□□□ -1.37
SNF7YLR025W CGI121Q03705 181 aaKnown RBP6.52□□□□□ -1.37
SNF7YLR025W YDR102CQ03864 110 aa6.52□□□□□ -1.37
SNF7YLR025W VBA4Q04602 768 aaKnown RBP6.52□□□□□ -1.37
SNF7YLR025W NIP7Q08962 181 aaKnown RBP6.52□□□□□ -1.37
SNF7YLR025W TGS1Q12052 315 aa6.52□□□□□ -1.37
SNF7YLR025W TFC7Q12415 435 aa6.52□□□□□ -1.37
SNF7YLR025W YHR213W-AQ8TGT4 77 aa6.52□□□□□ -1.37
SNF7YLR025W FAS1P07149 2051 aaKnown RBP6.52□□□□□ -1.37
SNF7YLR025W YPR117WQ06116 2489 aa6.52□□□□□ -1.37
SNF7YLR025W CYR1P08678 2026 aaKnown RBP6.51□□□□□ -1.37
SNF7YLR025W YMR084WA2P2R3 262 aa6.51□□□□□ -1.37
SNF7YLR025W CDC36P06100 191 aaPredicted RBP6.51□□□□□ -1.37
SNF7YLR025W AFG1P32317 509 aa6.51□□□□□ -1.37
SNF7YLR025W RPL13BP40212 199 aaKnown RBP6.51□□□□□ -1.37
SNF7YLR025W YJR011CP47086 261 aaPredicted RBP6.51□□□□□ -1.37
SNF7YLR025W MCM22P47167 239 aa6.51□□□□□ -1.37
SNF7YLR025W UBP8P50102 471 aa6.51□□□□□ -1.37
SNF7YLR025W AVT4P50944 713 aa6.51□□□□□ -1.37
SNF7YLR025W PHO23P50947 330 aa6.51□□□□□ -1.37
SNF7YLR025W UFD1P53044 361 aa6.51□□□□□ -1.37
SNF7YLR025W SMX3P54999 86 aaPredicted RBP6.51□□□□□ -1.37
SNF7YLR025W ACT1P60010 375 aaKnown RBP6.51□□□□□ -1.37
SNF7YLR025W ZEO1Q08245 113 aa6.51□□□□□ -1.37
SNF7YLR025W ATP16Q12165 160 aa6.51□□□□□ -1.37
SNF7YLR025W MCT1Q12283 360 aa6.51□□□□□ -1.37
SNF7YLR025W SWM1Q12379 170 aa6.51□□□□□ -1.37
SNF7YLR025W RPL13AQ12690 199 aaPredicted RBP6.51□□□□□ -1.37
SNF7YLR025W UBA3Q99344 299 aa6.51□□□□□ -1.37
SNF7YLR025W YLR358CO13565 187 aa6.5□□□□□ -1.37
SNF7YLR025W TPI1P00942 248 aaKnown RBP6.5□□□□□ -1.37
SNF7YLR025W RPD3P32561 433 aa6.5□□□□□ -1.37
SNF7YLR025W COS9P36034 407 aa6.5□□□□□ -1.37
SNF7YLR025W CBT1P36038 271 aaPredicted RBP6.5□□□□□ -1.37
SNF7YLR025W YPC1P38298 316 aa6.5□□□□□ -1.37
SNF7YLR025W YHC3P47040 408 aa6.5□□□□□ -1.37
SNF7YLR025W BUL1P48524 976 aa6.5□□□□□ -1.37
SNF7YLR025W NIF3P53081 288 aa6.5□□□□□ -1.37
SNF7YLR025W YNR048WP53740 393 aa6.5□□□□□ -1.37
SNF7YLR025W RSM23Q01163 450 aa6.5□□□□□ -1.37
SNF7YLR025W YAP6Q03935 383 aa6.5□□□□□ -1.37
SNF7YLR025W RTT103Q05543 409 aa6.5□□□□□ -1.37
SNF7YLR025W RRT7Q07829 113 aa6.5□□□□□ -1.37
SNF7YLR025W MCH4Q08268 501 aa6.5□□□□□ -1.37
SNF7YLR025W YOR376WQ08900 122 aa6.5□□□□□ -1.37
SNF7YLR025W MED4Q12343 284 aa6.5□□□□□ -1.37
SNF7YLR025W YHR214C-EQ8TGK0 99 aa6.5□□□□□ -1.37
SNF7YLR025W UBI4P0CG63 381 aaKnown RBP6.49□□□□□ -1.37
SNF7YLR025W RPL40AP0CH08 128 aaKnown RBP6.49□□□□□ -1.37
SNF7YLR025W RPL40BP0CH09 128 aaKnown RBP6.49□□□□□ -1.37
SNF7YLR025W MRP2P10663 115 aaPredicted RBP6.49□□□□□ -1.37
SNF7YLR025W SEC22P22214 214 aa6.49□□□□□ -1.37
SNF7YLR025W ERG8P24521 451 aa6.49□□□□□ -1.37
SNF7YLR025W LDS1P31379 325 aa6.49□□□□□ -1.37
SNF7YLR025W ARO4P32449 370 aaKnown RBP6.49□□□□□ -1.37
SNF7YLR025W FMT1P32785 401 aa6.49□□□□□ -1.37
SNF7YLR025W EMC5P40540 141 aa6.49□□□□□ -1.37
SNF7YLR025W BUD8P41698 603 aa6.49□□□□□ -1.37
SNF7YLR025W YGL159WP53110 370 aa6.49□□□□□ -1.37
SNF7YLR025W SDC1Q03323 175 aa6.49□□□□□ -1.37
SNF7YLR025W MIX14Q04341 121 aa6.49□□□□□ -1.37
SNF7YLR025W BER1Q06688 274 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 1160 ms