RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C RMR1P53060 241 aa1.82□□□□□ -2.12
RPF2YKR081C YDR209CQ03480 137 aa1.82□□□□□ -2.12
RPF2YKR081C YOR186WQ08560 144 aa1.82□□□□□ -2.12
RPF2YKR081C USB1Q12208 290 aaKnown RBP1.82□□□□□ -2.12
RPF2YKR081C SIR4P11978 1358 aa1.82□□□□□ -2.12
RPF2YKR081C SGE1P33335 543 aa1.81□□□□□ -2.12
RPF2YKR081C YKR045CP36138 183 aa1.81□□□□□ -2.12
RPF2YKR081C MRX3P38172 270 aa1.81□□□□□ -2.12
RPF2YKR081C ERV15P38312 142 aa1.81□□□□□ -2.12
RPF2YKR081C GOS1P38736 223 aa1.81□□□□□ -2.12
RPF2YKR081C MEP1P40260 492 aa1.81□□□□□ -2.12
RPF2YKR081C FIS1P40515 155 aa1.81□□□□□ -2.12
RPF2YKR081C YKE4P40544 346 aa1.81□□□□□ -2.12
RPF2YKR081C YPR172WQ06608 200 aa1.81□□□□□ -2.12
RPF2YKR081C DDI2P0CH63 225 aa1.8□□□□□ -2.12
RPF2YKR081C DDI3P0CH64 225 aa1.8□□□□□ -2.12
RPF2YKR081C POL30P15873 258 aaKnown RBP1.8□□□□□ -2.12
RPF2YKR081C RAD17P48581 401 aa1.8□□□□□ -2.12
RPF2YKR081C SNZ2P53824 298 aa1.8□□□□□ -2.12
RPF2YKR081C TIM11P81449 96 aaPredicted RBP1.8□□□□□ -2.12
RPF2YKR081C NEJ1Q06148 342 aa1.8□□□□□ -2.12
RPF2YKR081C YPL257WQ08974 193 aa1.8□□□□□ -2.12
RPF2YKR081C MSW1P04803 379 aa1.79□□□□□ -2.12
RPF2YKR081C YBR096WP38256 230 aa1.79□□□□□ -2.12
RPF2YKR081C USE1P53146 245 aa1.79□□□□□ -2.12
RPF2YKR081C SMD2Q06217 110 aaKnown RBP1.79□□□□□ -2.12
RPF2YKR081C CHD1P32657 1468 aa1.78□□□□□ -2.12
RPF2YKR081C SNA3P14359 133 aa1.78□□□□□ -2.12
RPF2YKR081C GRX2P17695 143 aaKnown RBP1.78□□□□□ -2.12
RPF2YKR081C RNA15P25299 296 aaPredicted RBP1.78□□□□□ -2.12
RPF2YKR081C AVT2P39981 480 aa1.78□□□□□ -2.12
RPF2YKR081C GLG2P47011 380 aa1.78□□□□□ -2.12
RPF2YKR081C GPI8P49018 411 aa1.78□□□□□ -2.12
RPF2YKR081C INO80P53115 1489 aa1.77□□□□□ -2.13
RPF2YKR081C RME1P32338 300 aaKnown RBP1.77□□□□□ -2.13
RPF2YKR081C YPT52P36018 234 aaKnown RBP1.77□□□□□ -2.13
RPF2YKR081C OPY1P38271 328 aa1.77□□□□□ -2.13
RPF2YKR081C MZM1Q03429 123 aaPredicted RBP1.77□□□□□ -2.13
RPF2YKR081C ATG39Q06159 398 aa1.77□□□□□ -2.13
RPF2YKR081C ARR2Q06597 130 aa1.77□□□□□ -2.13
RPF2YKR081C RRS1Q08746 203 aaKnown RBP1.77□□□□□ -2.13
RPF2YKR081C UBR2Q07963 1872 aa1.76□□□□□ -2.13
RPF2YKR081C IPP1P00817 287 aaKnown RBP1.76□□□□□ -2.13
RPF2YKR081C OM45P16547 393 aa1.76□□□□□ -2.13
RPF2YKR081C YGL010WP25338 174 aa1.76□□□□□ -2.13
RPF2YKR081C YBR219CP38317 127 aa1.76□□□□□ -2.13
RPF2YKR081C YJR056CP47115 236 aa1.76□□□□□ -2.13
RPF2YKR081C YNL046WP53956 172 aa1.76□□□□□ -2.13
RPF2YKR081C BUD25P85052 153 aa1.76□□□□□ -2.13
RPF2YKR081C HTL1Q9URQ5 78 aa1.76□□□□□ -2.13
RPF2YKR081C YHR180WP38868 163 aa1.75□□□□□ -2.13
RPF2YKR081C YJR079WP47126 109 aa1.75□□□□□ -2.13
RPF2YKR081C MPP6P53725 186 aaPredicted RBP1.75□□□□□ -2.13
RPF2YKR081C RHO3Q00245 231 aaKnown RBP1.75□□□□□ -2.13
RPF2YKR081C GGA1Q06336 557 aa1.75□□□□□ -2.13
RPF2YKR081C SDO1Q07953 250 aaKnown RBP1.75□□□□□ -2.13
RPF2YKR081C CSM4Q08955 156 aa1.75□□□□□ -2.13
RPF2YKR081C YCT1Q12235 531 aa1.75□□□□□ -2.13
RPF2YKR081C SNU23Q12368 194 aaPredicted RBP1.75□□□□□ -2.13
RPF2YKR081C MSF1P08425 469 aa1.74□□□□□ -2.13
RPF2YKR081C ACP1P32463 125 aa1.74□□□□□ -2.13
RPF2YKR081C YBR220CP38318 560 aa1.74□□□□□ -2.13
RPF2YKR081C SVP26P38869 228 aa1.74□□□□□ -2.13
RPF2YKR081C BFR1P38934 470 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13 RIP-Chip
RPF2YKR081C YAR068WP39564 161 aa1.74□□□□□ -2.13
RPF2YKR081C YIL001WP40560 513 aa1.74□□□□□ -2.13
RPF2YKR081C HAM1P47119 197 aaKnown RBP1.74□□□□□ -2.13
RPF2YKR081C NUP49Q02199 472 aa1.74□□□□□ -2.13
RPF2YKR081C HEM25Q07534 307 aa1.74□□□□□ -2.13
RPF2YKR081C RUD3Q12234 484 aaKnown RBP1.74□□□□□ -2.13
RPF2YKR081C ARC19P33204 171 aaKnown RBP1.73□□□□□ -2.13
RPF2YKR081C BIG1P38813 335 aa1.73□□□□□ -2.13
RPF2YKR081C YHR127WP38833 243 aaKnown RBP1.73□□□□□ -2.13
RPF2YKR081C RTT105P40063 208 aa1.73□□□□□ -2.13
RPF2YKR081C GLE2P40066 365 aa1.73□□□□□ -2.13
RPF2YKR081C AGE2P40529 298 aa1.73□□□□□ -2.13
RPF2YKR081C YNR062CP53748 327 aa1.73□□□□□ -2.13
RPF2YKR081C BTS1Q12051 335 aa1.73□□□□□ -2.13
RPF2YKR081C TPO4Q12256 659 aa1.73□□□□□ -2.13
RPF2YKR081C RRP36Q12481 300 aaPredicted RBP1.73□□□□□ -2.13
RPF2YKR081C YOR020W-AQ3E824 90 aa1.73□□□□□ -2.13
RPF2YKR081C MRPL25P23369 157 aa1.72□□□□□ -2.13
RPF2YKR081C RPF1P38805 295 aaKnown RBP1.72□□□□□ -2.13
RPF2YKR081C YER034WP40022 185 aaKnown RBP1.72□□□□□ -2.13
RPF2YKR081C RPA43P46669 326 aa1.72□□□□□ -2.13
RPF2YKR081C RTC4P53850 401 aa1.72□□□□□ -2.13
RPF2YKR081C RNH1Q04740 348 aa1.72□□□□□ -2.13
RPF2YKR081C PET9P18239 318 aaKnown RBP1.71□□□□□ -2.14
RPF2YKR081C ERD2P18414 219 aa1.71□□□□□ -2.14
RPF2YKR081C KDX1P36005 433 aa1.71□□□□□ -2.14
RPF2YKR081C JHD2P47156 728 aaPredicted RBP1.71□□□□□ -2.14
RPF2YKR081C TOS8P53147 276 aa1.71□□□□□ -2.14
RPF2YKR081C SEI1Q06058 285 aa1.71□□□□□ -2.14
RPF2YKR081C CSI2Q08054 341 aa1.71□□□□□ -2.14
RPF2YKR081C NIP7Q08962 181 aaKnown RBP1.71□□□□□ -2.14
RPF2YKR081C FPR1P20081 114 aaKnown RBP1.7□□□□□ -2.14
RPF2YKR081C RSM25P40496 264 aa1.7□□□□□ -2.14
RPF2YKR081C ILM1P47155 203 aa1.7□□□□□ -2.14
RPF2YKR081C SML1Q04964 104 aa1.7□□□□□ -2.14
RPF2YKR081C YLR162WQ06235 118 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 183.8 ms