RNA–Protein interactions for RNA: YHR135C

YCK1, Transcript of Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform, yeastyeast

Gene YCK1, Length 1,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK1YHR135C RPS16AP0CX51 143 aaKnown RBP5.34□□□□□ -1.55
YCK1YHR135C RPS16BP0CX52 143 aaKnown RBP5.34□□□□□ -1.55
YCK1YHR135C LDB16P25587 256 aa5.34□□□□□ -1.55
YCK1YHR135C AFG1P32317 509 aa5.34□□□□□ -1.55
YCK1YHR135C MSS1P32559 526 aaPredicted RBP5.34□□□□□ -1.55
YCK1YHR135C VAM7P32912 316 aa5.34□□□□□ -1.55
YCK1YHR135C GEP4P38812 185 aa5.34□□□□□ -1.55
YCK1YHR135C SER3P40054 469 aa5.34□□□□□ -1.55
YCK1YHR135C YJL016WP47072 561 aa5.34□□□□□ -1.55
YCK1YHR135C ECM27P47144 725 aa5.34□□□□□ -1.55
YCK1YHR135C YGL159WP53110 370 aa5.34□□□□□ -1.55
YCK1YHR135C SLI1P53304 468 aa5.34□□□□□ -1.55
YCK1YHR135C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
YCK1YHR135C FEX1Q08913 375 aa5.34□□□□□ -1.55
YCK1YHR135C SRL2Q12020 392 aa5.34□□□□□ -1.55
YCK1YHR135C RTR2Q12378 196 aa5.34□□□□□ -1.55
YCK1YHR135C RPL11BQ3E757 174 aaPredicted RBP5.34□□□□□ -1.55
YCK1YHR135C Q0144Q9ZZW2 109 aa5.34□□□□□ -1.55
YCK1YHR135C AAC1P04710 309 aa5.34□□□□□ -1.56
YCK1YHR135C YKL063CP35725 167 aa5.34□□□□□ -1.56
YCK1YHR135C FIG1P38224 298 aa5.34□□□□□ -1.56
YCK1YHR135C GTF1P53260 183 aaPredicted RBP5.34□□□□□ -1.56
YCK1YHR135C ATG31Q12421 196 aa5.34□□□□□ -1.56
YCK1YHR135C PUT1P09368 476 aa5.33□□□□□ -1.56
YCK1YHR135C NAM2P11325 894 aa5.33□□□□□ -1.56
YCK1YHR135C YCR061WP25639 631 aa5.33□□□□□ -1.56
YCK1YHR135C SUA5P32579 426 aa5.33□□□□□ -1.56
YCK1YHR135C PPZ2P33329 710 aa5.33□□□□□ -1.56
YCK1YHR135C PHB1P40961 287 aa5.33□□□□□ -1.56
YCK1YHR135C YFL054CP43549 646 aa5.33□□□□□ -1.56
YCK1YHR135C UBP8P50102 471 aa5.33□□□□□ -1.56
YCK1YHR135C GIM3P53900 129 aa5.33□□□□□ -1.56
YCK1YHR135C NRG1Q03125 231 aa5.33□□□□□ -1.56
YCK1YHR135C DIG2Q03373 323 aaKnown RBP5.33□□□□□ -1.56
YCK1YHR135C YML018CQ03730 393 aa5.33□□□□□ -1.56
YCK1YHR135C RXT3Q07458 294 aa5.33□□□□□ -1.56
YCK1YHR135C PET20Q99373 253 aa5.33□□□□□ -1.56
YCK1YHR135C URA3P03962 267 aa5.32□□□□□ -1.56
YCK1YHR135C YLL053CP0CD98 152 aa5.32□□□□□ -1.56
YCK1YHR135C RFA1P22336 621 aaKnown RBP5.32□□□□□ -1.56
YCK1YHR135C YCR016WP25617 290 aaKnown RBP5.32□□□□□ -1.56
YCK1YHR135C DUT1P33317 147 aa5.32□□□□□ -1.56
YCK1YHR135C POP8P38208 133 aa5.32□□□□□ -1.56
YCK1YHR135C MTC6P38849 526 aa5.32□□□□□ -1.56
YCK1YHR135C YND1P40009 630 aa5.32□□□□□ -1.56
YCK1YHR135C IDP2P41939 412 aa5.32□□□□□ -1.56
YCK1YHR135C SNX4P47057 423 aa5.32□□□□□ -1.56
YCK1YHR135C AVT4P50944 713 aa5.32□□□□□ -1.56
YCK1YHR135C HOL1P53389 586 aa5.32□□□□□ -1.56
YCK1YHR135C RSM23Q01163 450 aa5.32□□□□□ -1.56
YCK1YHR135C PRM15Q03262 622 aa5.32□□□□□ -1.56
YCK1YHR135C YDR248CQ03786 193 aa5.32□□□□□ -1.56
YCK1YHR135C SYM1Q06563 197 aa5.32□□□□□ -1.56
YCK1YHR135C HUT1Q12520 339 aa5.32□□□□□ -1.56
YCK1YHR135C YJR112W-AQ3E743 109 aa5.32□□□□□ -1.56
YCK1YHR135C CBP6P07253 162 aaPredicted RBP5.31□□□□□ -1.56
YCK1YHR135C RPL40AP0CH08 128 aaKnown RBP5.31□□□□□ -1.56
YCK1YHR135C RPL40BP0CH09 128 aaKnown RBP5.31□□□□□ -1.56
YCK1YHR135C TIP1P27654 210 aaPredicted RBP5.31□□□□□ -1.56
YCK1YHR135C YKL107WP34251 309 aa5.31□□□□□ -1.56
YCK1YHR135C SRY1P36007 326 aa5.31□□□□□ -1.56
YCK1YHR135C FLO10P36170 1169 aa5.31□□□□□ -1.56
YCK1YHR135C ARO9P38840 513 aaPredicted RBP5.31□□□□□ -1.56
YCK1YHR135C BFR1P38934 470 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
YCK1YHR135C LSM1P47017 172 aaKnown RBP5.31□□□□□ -1.56
YCK1YHR135C YJR111CP47148 283 aaKnown RBP5.31□□□□□ -1.56
YCK1YHR135C NSA1P53136 463 aaPredicted RBP5.31□□□□□ -1.56
YCK1YHR135C YNR048WP53740 393 aa5.31□□□□□ -1.56
YCK1YHR135C DID2P69771 204 aa5.31□□□□□ -1.56
YCK1YHR135C YDR387CQ04162 555 aa5.31□□□□□ -1.56
YCK1YHR135C YDL180WQ12301 547 aa5.31□□□□□ -1.56
YCK1YHR135C TPI1P00942 248 aaKnown RBP5.3□□□□□ -1.56
YCK1YHR135C REP2P03872 296 aa5.3□□□□□ -1.56
YCK1YHR135C RPL30P14120 105 aaKnown RBP5.3□□□□□ -1.56
YCK1YHR135C SEN2P16658 377 aa5.3□□□□□ -1.56
YCK1YHR135C MAG1P22134 296 aaKnown RBP5.3□□□□□ -1.56
YCK1YHR135C SEC22P22214 214 aa5.3□□□□□ -1.56
YCK1YHR135C CPR4P25334 318 aa5.3□□□□□ -1.56
YCK1YHR135C ERG3P32353 365 aa5.3□□□□□ -1.56
YCK1YHR135C MRP20P32387 263 aa5.3□□□□□ -1.56
YCK1YHR135C MRPS5P33759 307 aa5.3□□□□□ -1.56
YCK1YHR135C YEL057CP39983 233 aa5.3□□□□□ -1.56
YCK1YHR135C UFD1P53044 361 aa5.3□□□□□ -1.56
YCK1YHR135C HHT1P61830 136 aa5.3□□□□□ -1.56
YCK1YHR135C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
YCK1YHR135C NCE102Q12207 173 aaRIP-Chip data5.3□□□□□ -1.56not detected
YCK1YHR135C TFB5Q3E7C1 72 aaPredicted RBP5.3□□□□□ -1.56
YCK1YHR135C TDH3P00359 332 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
YCK1YHR135C ARO3P14843 370 aaKnown RBP5.3□□□□□ -1.56
YCK1YHR135C MRPL36P36531 177 aa5.3□□□□□ -1.56
YCK1YHR135C COS8P38723 381 aa5.3□□□□□ -1.56
YCK1YHR135C PTI1P39927 425 aaPredicted RBP5.3□□□□□ -1.56
YCK1YHR135C MOB2P43563 287 aa5.3□□□□□ -1.56
YCK1YHR135C TAD2P47058 250 aa5.3□□□□□ -1.56
YCK1YHR135C NIF3P53081 288 aa5.3□□□□□ -1.56
YCK1YHR135C RSM10Q03201 203 aa5.3□□□□□ -1.56
YCK1YHR135C YAP6Q03935 383 aa5.3□□□□□ -1.56
YCK1YHR135C HRI1Q05905 244 aaKnown RBP5.3□□□□□ -1.56
YCK1YHR135C TGS1Q12052 315 aa5.3□□□□□ -1.56
YCK1YHR135C ATP14Q12349 124 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms