RNA–Protein interactions for RNA: YHR121W

LSM12, Transcript of Protein of unknown function that may function in RNA processing, yeastyeast

Gene LSM12, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM12YHR121W CSM1P25651 190 aa2.38□□□□□ -2.03
LSM12YHR121W MRPL40P36534 297 aa2.38□□□□□ -2.03
LSM12YHR121W GRE3P38715 327 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
LSM12YHR121W TDA11P38854 504 aa2.38□□□□□ -2.03
LSM12YHR121W AGP3P43548 558 aa2.38□□□□□ -2.03
LSM12YHR121W YJL016WP47072 561 aa2.38□□□□□ -2.03
LSM12YHR121W TAF9Q05027 157 aa2.38□□□□□ -2.03
LSM12YHR121W DCR2Q05924 578 aa2.38□□□□□ -2.03
LSM12YHR121W YBL112CQ3E7Y4 105 aa2.38□□□□□ -2.03
LSM12YHR121W MLP1Q02455 1875 aaKnown RBP2.37□□□□□ -2.03
LSM12YHR121W ERG10P41338 398 aaKnown RBP2.37□□□□□ -2.03
LSM12YHR121W VPS60Q03390 229 aa2.37□□□□□ -2.03
LSM12YHR121W ECM18Q04623 453 aa2.37□□□□□ -2.03
LSM12YHR121W PET494P07390 489 aaPredicted RBP2.36□□□□□ -2.03
LSM12YHR121W CWP1P28319 239 aa2.36□□□□□ -2.03
LSM12YHR121W CSG2P35206 410 aa2.36□□□□□ -2.03
LSM12YHR121W YFR054CP43622 192 aa2.36□□□□□ -2.03
LSM12YHR121W KEL2P50090 882 aa2.36□□□□□ -2.03
LSM12YHR121W CAM1P29547 415 aaKnown RBP2.35□□□□□ -2.03
LSM12YHR121W HIS2P38635 335 aa2.35□□□□□ -2.03
LSM12YHR121W ARN2P38724 620 aa2.35□□□□□ -2.03
LSM12YHR121W YJL027CP47063 138 aaPredicted RBP2.35□□□□□ -2.03
LSM12YHR121W PNC1P53184 216 aaKnown RBP2.35□□□□□ -2.03
LSM12YHR121W FMP41P53889 259 aaKnown RBP2.35□□□□□ -2.03
LSM12YHR121W YMR114CQ04471 368 aaKnown RBP2.35□□□□□ -2.03
LSM12YHR121W GPN3Q06543 272 aa2.35□□□□□ -2.03
LSM12YHR121W BER1Q06688 274 aaKnown RBP2.35□□□□□ -2.03
LSM12YHR121W RAD50P12753 1312 aa2.35□□□□□ -2.03
LSM12YHR121W ILV1P00927 576 aaKnown RBP2.34□□□□□ -2.03
LSM12YHR121W LOA1Q06508 300 aa2.34□□□□□ -2.03
LSM12YHR121W NOT5Q12514 560 aaPredicted RBP2.34□□□□□ -2.03
LSM12YHR121W UGA1P17649 471 aa2.33□□□□□ -2.04
LSM12YHR121W SFC1P33303 322 aa2.33□□□□□ -2.04
LSM12YHR121W FCY21P40039 528 aa2.33□□□□□ -2.04
LSM12YHR121W LOC1P43586 204 aaPredicted RBP2.33□□□□□ -2.04
LSM12YHR121W GON7P46984 123 aa2.33□□□□□ -2.04
LSM12YHR121W PEX31P53203 462 aa2.33□□□□□ -2.04
LSM12YHR121W CAB4P53332 305 aa2.33□□□□□ -2.04
LSM12YHR121W SPO19Q03029 223 aa2.33□□□□□ -2.04
LSM12YHR121W EBS1Q03466 884 aaKnown RBP2.33□□□□□ -2.04
LSM12YHR121W YOR062CP36025 268 aa2.32□□□□□ -2.04
LSM12YHR121W YGL185CP53100 379 aa2.32□□□□□ -2.04
LSM12YHR121W SMT3Q12306 101 aaKnown RBP2.32□□□□□ -2.04
LSM12YHR121W DPB2P24482 689 aaPredicted RBP2.31□□□□□ -2.04
LSM12YHR121W CIS3P47001 227 aa2.31□□□□□ -2.04
LSM12YHR121W IBA57P47158 497 aa2.31□□□□□ -2.04
LSM12YHR121W RPS3P05750 240 aaKnown RBP2.3□□□□□ -2.04
LSM12YHR121W TAF14P35189 244 aa2.3□□□□□ -2.04
LSM12YHR121W GCD14P46959 383 aaPredicted RBP2.3□□□□□ -2.04
LSM12YHR121W CPD1P53314 239 aa2.3□□□□□ -2.04
LSM12YHR121W SDC1Q03323 175 aa2.3□□□□□ -2.04
LSM12YHR121W COQ1P18900 473 aa2.29□□□□□ -2.04
LSM12YHR121W MRX3P38172 270 aa2.29□□□□□ -2.04
LSM12YHR121W YJL118WP47022 219 aa2.29□□□□□ -2.04
LSM12YHR121W TAD2P47058 250 aa2.29□□□□□ -2.04
LSM12YHR121W NIF3P53081 288 aa2.29□□□□□ -2.04
LSM12YHR121W YNL260CP53846 198 aa2.29□□□□□ -2.04
LSM12YHR121W BCP1Q06338 283 aa2.29□□□□□ -2.04
LSM12YHR121W YAL064W-BO13512 126 aa2.28□□□□□ -2.04
LSM12YHR121W YCR102CP25608 368 aa2.28□□□□□ -2.04
LSM12YHR121W TEM1P38987 245 aa2.28□□□□□ -2.04
LSM12YHR121W ALG11P53954 548 aaKnown RBP2.28□□□□□ -2.04
LSM12YHR121W ERV41Q04651 352 aa2.28□□□□□ -2.04
LSM12YHR121W SFH1Q06168 426 aa2.28□□□□□ -2.04
LSM12YHR121W FRS2P15625 503 aaKnown RBP2.27□□□□□ -2.05
LSM12YHR121W VPS3P23643 1011 aa2.27□□□□□ -2.05
LSM12YHR121W MEK1P24719 497 aaPredicted RBP2.27□□□□□ -2.05
LSM12YHR121W PEX3P28795 441 aa2.27□□□□□ -2.05
LSM12YHR121W SER33P40510 469 aa2.27□□□□□ -2.05
LSM12YHR121W VBA1Q04301 562 aa2.27□□□□□ -2.05
LSM12YHR121W YPL247CQ12523 523 aa2.27□□□□□ -2.05
LSM12YHR121W RPC40P07703 335 aaKnown RBP2.26□□□□□ -2.05
LSM12YHR121W YSR3P23501 404 aa2.26□□□□□ -2.05
LSM12YHR121W RNP1P32385 249 aa2.26□□□□□ -2.05
LSM12YHR121W GDH2P33327 1092 aaKnown RBP2.26□□□□□ -2.05
LSM12YHR121W CDC14Q00684 551 aa2.26□□□□□ -2.05
LSM12YHR121W SEC10Q06245 871 aa2.26□□□□□ -2.05
LSM12YHR121W MRPL23Q12487 163 aaPredicted RBP2.26□□□□□ -2.05
LSM12YHR121W POL30P15873 258 aaKnown RBP2.25□□□□□ -2.05
LSM12YHR121W EBP2P36049 427 aaKnown RBP2.25□□□□□ -2.05
LSM12YHR121W NPT1P39683 429 aaKnown RBP2.25□□□□□ -2.05
LSM12YHR121W AGX1P43567 385 aa2.25□□□□□ -2.05
LSM12YHR121W PEX12Q04370 399 aa2.25□□□□□ -2.05
LSM12YHR121W BOL1Q3E793 110 aa2.25□□□□□ -2.05
LSM12YHR121W COS2P0CX12 379 aa2.24□□□□□ -2.05
LSM12YHR121W COS3P0CX13 379 aa2.24□□□□□ -2.05
LSM12YHR121W PPH21P23594 369 aa2.24□□□□□ -2.05
LSM12YHR121W POF1P25576 258 aa2.24□□□□□ -2.05
LSM12YHR121W SCM4P32564 187 aa2.24□□□□□ -2.05
LSM12YHR121W YKL102CP34249 101 aa2.24□□□□□ -2.05
LSM12YHR121W MAL32P38158 584 aa2.24□□□□□ -2.05
LSM12YHR121W PHB1P40961 287 aa2.24□□□□□ -2.05
LSM12YHR121W YLR413WQ06689 675 aa2.24□□□□□ -2.05
LSM12YHR121W PST1Q12355 444 aa2.24□□□□□ -2.05
LSM12YHR121W YOS9Q99220 542 aa2.24□□□□□ -2.05
LSM12YHR121W PUT1P09368 476 aa2.23□□□□□ -2.05
LSM12YHR121W OM45P16547 393 aa2.23□□□□□ -2.05
LSM12YHR121W YJL028WP47062 111 aa2.23□□□□□ -2.05
LSM12YHR121W MAL12P53341 584 aa2.23□□□□□ -2.05
LSM12YHR121W ARP5P53946 755 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 72.5 ms