RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C GCN4P03069 281 aa10.92□□□□□ -0.66
SHU1YHL006C PEX4P29340 183 aa10.92□□□□□ -0.66
SHU1YHL006C DAL3P32459 195 aa10.92□□□□□ -0.66
SHU1YHL006C TCA17P32613 152 aa10.92□□□□□ -0.66
SHU1YHL006C AIM46P38885 310 aa10.92□□□□□ -0.66
SHU1YHL006C UPS1Q05776 175 aa10.92□□□□□ -0.66
SHU1YHL006C QCR7P00128 127 aa10.91□□□□□ -0.66
SHU1YHL006C PET122P10355 254 aa10.91□□□□□ -0.66
SHU1YHL006C PCL6P40038 420 aa10.91□□□□□ -0.66
SHU1YHL006C YJL218WP40892 196 aaKnown RBP10.91□□□□□ -0.66
SHU1YHL006C RRP17Q04031 235 aaPredicted RBP10.91□□□□□ -0.66
SHU1YHL006C TMA10Q06177 86 aa10.91□□□□□ -0.66
SHU1YHL006C ARR2Q06597 130 aa10.91□□□□□ -0.66
SHU1YHL006C GDH1P07262 454 aaKnown RBP10.9□□□□□ -0.66
SHU1YHL006C ISC10P32645 267 aa10.9□□□□□ -0.66
SHU1YHL006C DDI1P40087 428 aa10.9□□□□□ -0.66
SHU1YHL006C YFL015CP43578 164 aa10.9□□□□□ -0.66
SHU1YHL006C RAX2Q12465 1220 aa10.9□□□□□ -0.66
SHU1YHL006C ZUO1P32527 433 aaKnown RBP10.89□□□□□ -0.67
SHU1YHL006C YBL010CP32788 280 aa10.89□□□□□ -0.67
SHU1YHL006C VAM7P32912 316 aa10.89□□□□□ -0.67
SHU1YHL006C SHE2P36068 246 aaKnown RBP RIP-Chip data10.89□□□□□ -0.67not detected
SHU1YHL006C ADH5P38113 351 aaKnown RBP10.89□□□□□ -0.67
SHU1YHL006C PRS2P38620 318 aaKnown RBP10.89□□□□□ -0.67
SHU1YHL006C OKP1P53298 406 aa10.89□□□□□ -0.67
SHU1YHL006C RPL21AQ02753 160 aaKnown RBP10.89□□□□□ -0.67
SHU1YHL006C WHI5Q12416 295 aa10.89□□□□□ -0.67
SHU1YHL006C RPL21BQ12672 160 aaKnown RBP10.89□□□□□ -0.67
SHU1YHL006C HIS3P06633 220 aa10.88□□□□□ -0.67
SHU1YHL006C RPS18AP0CX55 146 aaKnown RBP10.88□□□□□ -0.67
SHU1YHL006C RPS18BP0CX56 146 aaPredicted RBP10.88□□□□□ -0.67
SHU1YHL006C YBR137WP38276 179 aa10.88□□□□□ -0.67
SHU1YHL006C YMR166CQ03829 368 aa10.88□□□□□ -0.67
SHU1YHL006C VAM3Q12241 283 aa10.88□□□□□ -0.67
SHU1YHL006C ATG40Q99325 256 aa10.88□□□□□ -0.67
SHU1YHL006C SWD2P36104 329 aaPredicted RBP10.87□□□□□ -0.67
SHU1YHL006C CCZ1P38273 704 aa10.87□□□□□ -0.67
SHU1YHL006C GWT1P47026 490 aa10.87□□□□□ -0.67
SHU1YHL006C GPI14P47088 403 aaKnown RBP10.87□□□□□ -0.67
SHU1YHL006C YGR054WP53235 642 aaKnown RBP10.87□□□□□ -0.67
SHU1YHL006C ECM18Q04623 453 aa10.87□□□□□ -0.67
SHU1YHL006C ATG22P25568 528 aa10.86□□□□□ -0.67
SHU1YHL006C SOR1P35497 357 aaKnown RBP10.86□□□□□ -0.67
SHU1YHL006C CCS1P40202 249 aaKnown RBP10.86□□□□□ -0.67
SHU1YHL006C GNA1P43577 159 aaPredicted RBP10.86□□□□□ -0.67
SHU1YHL006C BXI1P48558 297 aa10.86□□□□□ -0.67
SHU1YHL006C YGL262WP53054 175 aa10.86□□□□□ -0.67
SHU1YHL006C YGR045CP53229 120 aa10.86□□□□□ -0.67
SHU1YHL006C HSK3P69852 69 aa10.86□□□□□ -0.67
SHU1YHL006C CTF19Q02732 369 aa10.86□□□□□ -0.67
SHU1YHL006C SOR2Q07786 357 aa10.86□□□□□ -0.67
SHU1YHL006C RPS31P05759 152 aaKnown RBP10.85□□□□□ -0.67
SHU1YHL006C GRX3Q03835 250 aa10.85□□□□□ -0.67
SHU1YHL006C GPN3Q06543 272 aa10.85□□□□□ -0.67
SHU1YHL006C YOR192C-CQ3E736 78 aa10.85□□□□□ -0.67
SHU1YHL006C YLL053CP0CD98 152 aa10.84□□□□□ -0.67
SHU1YHL006C RPL24BP24000 155 aaKnown RBP10.84□□□□□ -0.67
SHU1YHL006C YCR101CP25607 182 aa10.84□□□□□ -0.67
SHU1YHL006C SWD3P38123 315 aa10.84□□□□□ -0.67
SHU1YHL006C FIG1P38224 298 aa10.84□□□□□ -0.67
SHU1YHL006C MED8P38304 223 aa10.84□□□□□ -0.67
SHU1YHL006C BNA1P47096 177 aa10.84□□□□□ -0.67
SHU1YHL006C TTI2P47168 421 aa10.84□□□□□ -0.67
SHU1YHL006C TMA20P89886 181 aaPredicted RBP10.84□□□□□ -0.67
SHU1YHL006C ATG41Q12048 136 aa10.84□□□□□ -0.67
SHU1YHL006C BBP1Q12365 385 aa10.84□□□□□ -0.67
SHU1YHL006C AGA2P32781 87 aa10.83□□□□□ -0.68
SHU1YHL006C YNK1P36010 153 aaKnown RBP10.83□□□□□ -0.68
SHU1YHL006C YCR041WP37265 110 aa10.83□□□□□ -0.68
SHU1YHL006C HNT2P49775 206 aa10.83□□□□□ -0.68
SHU1YHL006C VMA5P31412 392 aaKnown RBP10.82□□□□□ -0.68
SHU1YHL006C CPR5P35176 225 aa10.82□□□□□ -0.68
SHU1YHL006C EDS1P38073 919 aa10.82□□□□□ -0.68
SHU1YHL006C ICS2P38284 255 aa10.82□□□□□ -0.68
SHU1YHL006C PSD1P39006 500 aa10.82□□□□□ -0.68
SHU1YHL006C YIL060WP40519 144 aa10.82□□□□□ -0.68
SHU1YHL006C SYS1P41544 203 aa10.82□□□□□ -0.68
SHU1YHL006C TAX4P47030 604 aa10.82□□□□□ -0.68
SHU1YHL006C FMP48P53233 369 aa10.82□□□□□ -0.68
SHU1YHL006C RCF1Q03713 159 aa10.82□□□□□ -0.68
SHU1YHL006C MRPL35Q06678 367 aa10.82□□□□□ -0.68
SHU1YHL006C YPR071WQ12346 211 aa10.82□□□□□ -0.68
SHU1YHL006C ODC2Q99297 307 aa10.82□□□□□ -0.68
SHU1YHL006C SUA7P29055 345 aaPredicted RBP10.81□□□□□ -0.68
SHU1YHL006C PAC2P39937 518 aa10.81□□□□□ -0.68
SHU1YHL006C SMB1P40018 196 aaKnown RBP10.81□□□□□ -0.68
SHU1YHL006C BNA6P43619 295 aa10.81□□□□□ -0.68
SHU1YHL006C RPS0BP46654 252 aaKnown RBP10.81□□□□□ -0.68
SHU1YHL006C YDL186WP48568 277 aa10.81□□□□□ -0.68
SHU1YHL006C SKP1P52286 194 aa10.81□□□□□ -0.68
SHU1YHL006C HNT1Q04344 158 aaKnown RBP10.81□□□□□ -0.68
SHU1YHL006C RFA3P26755 122 aaKnown RBP10.8□□□□□ -0.68
SHU1YHL006C ERG3P32353 365 aa10.8□□□□□ -0.68
SHU1YHL006C CBT1P36038 271 aaPredicted RBP10.8□□□□□ -0.68
SHU1YHL006C NTC20P38302 140 aaPredicted RBP10.8□□□□□ -0.68
SHU1YHL006C YDR415CQ04033 374 aaPredicted RBP10.8□□□□□ -0.68
SHU1YHL006C FIT1Q04433 528 aa10.8□□□□□ -0.68
SHU1YHL006C FCY1Q12178 158 aa10.8□□□□□ -0.68
SHU1YHL006C YER190C-BP0CX94 160 aa10.79□□□□□ -0.68
SHU1YHL006C YEL077W-AP0CX95 160 aa10.79□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms