RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W NIF3P53081 288 aa-0.05□□□□□ -2.42
CSE1YGL238W SWT21P53873 357 aaPredicted RBP-0.05□□□□□ -2.42
CSE1YGL238W ARC18Q05933 178 aaKnown RBP-0.05□□□□□ -2.42
CSE1YGL238W YDR262WQ12331 272 aa-0.05□□□□□ -2.42
CSE1YGL238W EMP46Q12396 444 aa-0.05□□□□□ -2.42
CSE1YGL238W YPR064WQ12492 139 aa-0.05□□□□□ -2.42
CSE1YGL238W RPL13AQ12690 199 aaPredicted RBP-0.05□□□□□ -2.42
CSE1YGL238W RPL31AP0C2H8 113 aaKnown RBP-0.05□□□□□ -2.42
CSE1YGL238W FBA1P14540 359 aaKnown RBP-0.05□□□□□ -2.42
CSE1YGL238W IFM1P25038 676 aa-0.05□□□□□ -2.42
CSE1YGL238W ACB1P31787 87 aa-0.05□□□□□ -2.42
CSE1YGL238W COT1P32798 439 aa-0.05□□□□□ -2.42
CSE1YGL238W YHR035WP38769 630 aa-0.05□□□□□ -2.42
CSE1YGL238W FET3P38993 636 aa-0.05□□□□□ -2.42
CSE1YGL238W KRE29P40026 464 aa-0.05□□□□□ -2.42
CSE1YGL238W CDC40P40968 455 aaPredicted RBP-0.05□□□□□ -2.42
CSE1YGL238W IBA57P47158 497 aa-0.05□□□□□ -2.42
CSE1YGL238W NBP35P52920 328 aa-0.05□□□□□ -2.42
CSE1YGL238W YNL050CP53952 270 aa-0.05□□□□□ -2.42
CSE1YGL238W MRS2Q01926 470 aa-0.05□□□□□ -2.42
CSE1YGL238W FUR1P18562 216 aaKnown RBP-0.06□□□□□ -2.42
CSE1YGL238W MDH2P22133 377 aa-0.06□□□□□ -2.42
CSE1YGL238W BMH1P29311 267 aaKnown RBP-0.06□□□□□ -2.42
CSE1YGL238W YHR022CP38763 256 aa-0.06□□□□□ -2.42
CSE1YGL238W TDA11P38854 504 aa-0.06□□□□□ -2.42
CSE1YGL238W SNL1P40548 159 aa-0.06□□□□□ -2.42
CSE1YGL238W YJR079WP47126 109 aa-0.06□□□□□ -2.42
CSE1YGL238W RPL37BP51402 88 aaKnown RBP-0.06□□□□□ -2.42
CSE1YGL238W YNL247WP53852 767 aaKnown RBP-0.06□□□□□ -2.42
CSE1YGL238W SED1Q01589 338 aa-0.06□□□□□ -2.42
CSE1YGL238W UBC7Q02159 165 aa-0.06□□□□□ -2.42
CSE1YGL238W FMN1Q03778 218 aa-0.06□□□□□ -2.42
CSE1YGL238W CAB5Q03941 241 aa-0.06□□□□□ -2.42
CSE1YGL238W EMI1Q04406 187 aa-0.06□□□□□ -2.42
CSE1YGL238W YLR030WQ07967 263 aa-0.06□□□□□ -2.42
CSE1YGL238W BCY1P07278 416 aaKnown RBP-0.06□□□□□ -2.42
CSE1YGL238W DPB2P24482 689 aaPredicted RBP-0.06□□□□□ -2.42
CSE1YGL238W IMP1P28627 190 aa-0.06□□□□□ -2.42
CSE1YGL238W ERG2P32352 222 aa-0.06□□□□□ -2.42
CSE1YGL238W MEI5P32489 222 aa-0.06□□□□□ -2.42
CSE1YGL238W PHO88P38264 188 aaPredicted RBP-0.06□□□□□ -2.42
CSE1YGL238W LIN1P38852 340 aaPredicted RBP-0.06□□□□□ -2.42
CSE1YGL238W YHB1P39676 399 aaKnown RBP-0.06□□□□□ -2.42
CSE1YGL238W SER33P40510 469 aa-0.06□□□□□ -2.42
CSE1YGL238W ABZ2Q03266 374 aa-0.06□□□□□ -2.42
CSE1YGL238W BUD21Q08492 214 aaPredicted RBP-0.06□□□□□ -2.42
CSE1YGL238W HAP2P06774 265 aa-0.07□□□□□ -2.42
CSE1YGL238W CWP1P28319 239 aa-0.07□□□□□ -2.42
CSE1YGL238W YHI9P38765 294 aa-0.07□□□□□ -2.42
CSE1YGL238W SVP26P38869 228 aa-0.07□□□□□ -2.42
CSE1YGL238W RPL10P41805 221 aaKnown RBP-0.07□□□□□ -2.42
CSE1YGL238W TRM9P49957 279 aa-0.07□□□□□ -2.42
CSE1YGL238W YGL034CP53186 121 aa-0.07□□□□□ -2.42
CSE1YGL238W HCH1P53834 153 aa-0.07□□□□□ -2.42
CSE1YGL238W RVB1Q03940 463 aaKnown RBP-0.07□□□□□ -2.42
CSE1YGL238W MEU1Q07938 337 aaKnown RBP RIP-Chip data-0.07□□□□□ -2.42not detected
CSE1YGL238W RPL16BP26785 198 aaKnown RBP-0.07□□□□□ -2.42
CSE1YGL238W RPN12P32496 274 aa-0.07□□□□□ -2.42
CSE1YGL238W ICE2P40499 491 aa-0.07□□□□□ -2.42
CSE1YGL238W NAS2P40555 220 aa-0.07□□□□□ -2.42
CSE1YGL238W VPS9P54787 451 aa-0.07□□□□□ -2.42
CSE1YGL238W CDC14Q00684 551 aa-0.07□□□□□ -2.42
CSE1YGL238W CYT2Q00873 224 aa-0.07□□□□□ -2.42
CSE1YGL238W YMR321CQ04898 105 aa-0.07□□□□□ -2.42
CSE1YGL238W ARR2Q06597 130 aa-0.07□□□□□ -2.42
CSE1YGL238W SAS5Q99314 248 aa-0.07□□□□□ -2.42
CSE1YGL238W ATP6P00854 259 aa-0.08□□□□□ -2.42
CSE1YGL238W HSP82P02829 709 aaKnown RBP-0.08□□□□□ -2.42
CSE1YGL238W RSR1P13856 272 aa-0.08□□□□□ -2.42
CSE1YGL238W NSP1P14907 823 aaKnown RBP-0.08□□□□□ -2.42
CSE1YGL238W UGA1P17649 471 aa-0.08□□□□□ -2.42
CSE1YGL238W GRX2P17695 143 aaKnown RBP-0.08□□□□□ -2.42
CSE1YGL238W CAT2P32796 670 aaKnown RBP-0.08□□□□□ -2.42
CSE1YGL238W MRPL15P36523 253 aa-0.08□□□□□ -2.42
CSE1YGL238W CUE1P38428 203 aa-0.08□□□□□ -2.42
CSE1YGL238W TEM1P38987 245 aa-0.08□□□□□ -2.42
CSE1YGL238W YER076CP40049 302 aa-0.08□□□□□ -2.42
CSE1YGL238W YJL028WP47062 111 aa-0.08□□□□□ -2.42
CSE1YGL238W YML018CQ03730 393 aa-0.08□□□□□ -2.42
CSE1YGL238W ATC1Q04005 294 aa-0.08□□□□□ -2.42
CSE1YGL238W PSY3Q12318 242 aa-0.08□□□□□ -2.42
CSE1YGL238W CMC4Q3E7A9 73 aa-0.08□□□□□ -2.42
CSE1YGL238W FAS1P07149 2051 aaKnown RBP-0.08□□□□□ -2.42
CSE1YGL238W SUA5P32579 426 aa-0.08□□□□□ -2.42
CSE1YGL238W PRS4P38063 326 aaPredicted RBP-0.08□□□□□ -2.42
CSE1YGL238W YHL037CP38733 133 aa-0.08□□□□□ -2.42
CSE1YGL238W ALP1P38971 573 aa-0.08□□□□□ -2.42
CSE1YGL238W SEN34P39707 275 aa-0.08□□□□□ -2.42
CSE1YGL238W YIL001WP40560 513 aa-0.08□□□□□ -2.42
CSE1YGL238W OST2P46964 130 aa-0.08□□□□□ -2.42
CSE1YGL238W BUD25P85052 153 aa-0.08□□□□□ -2.42
CSE1YGL238W SML1Q04964 104 aa-0.08□□□□□ -2.42
CSE1YGL238W TFB5Q3E7C1 72 aaPredicted RBP-0.08□□□□□ -2.42
CSE1YGL238W STE3P06783 470 aa-0.08□□□□□ -2.42
CSE1YGL238W MDH3P32419 343 aaKnown RBP RIP-Chip data-0.08□□□□□ -2.42not detected
CSE1YGL238W YBL028CP38202 106 aa-0.08□□□□□ -2.42
CSE1YGL238W PEX18P38855 283 aa-0.08□□□□□ -2.42
CSE1YGL238W YMR310CQ04867 317 aaPredicted RBP-0.08□□□□□ -2.42
CSE1YGL238W AKR2Q12013 749 aa-0.08□□□□□ -2.42
CSE1YGL238W APC9Q12107 265 aa-0.08□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms