RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C YLR177WQ06251 628 aa1.41□□□□□ -2.18
PRE4YFR050C RPN5Q12250 445 aaKnown RBP1.41□□□□□ -2.18
PRE4YFR050C YPS3Q12303 508 aa1.41□□□□□ -2.18
PRE4YFR050C MHF1Q3E835 90 aa1.41□□□□□ -2.18
PRE4YFR050C SRN2Q99176 213 aa1.41□□□□□ -2.18
PRE4YFR050C RPL6BP05739 176 aaKnown RBP1.4□□□□□ -2.19
PRE4YFR050C FMT1P32785 401 aa1.4□□□□□ -2.19
PRE4YFR050C SPP381P38282 291 aaPredicted RBP1.4□□□□□ -2.19
PRE4YFR050C CHL4P38907 458 aa1.4□□□□□ -2.19
PRE4YFR050C NPT1P39683 429 aaKnown RBP1.4□□□□□ -2.19
PRE4YFR050C UTP15Q04305 513 aaKnown RBP1.4□□□□□ -2.19
PRE4YFR050C PEX10Q05568 337 aa1.4□□□□□ -2.19
PRE4YFR050C SFM1Q12314 213 aa1.4□□□□□ -2.19
PRE4YFR050C YAL064W-BO13512 126 aa1.39□□□□□ -2.19
PRE4YFR050C TDH1P00360 332 aaKnown RBP1.39□□□□□ -2.19
PRE4YFR050C TOM40P23644 387 aaKnown RBP1.39□□□□□ -2.19
PRE4YFR050C TOA1P32773 286 aa1.39□□□□□ -2.19
PRE4YFR050C PDC2P32896 925 aa1.39□□□□□ -2.19
PRE4YFR050C WSS1P38838 269 aa1.39□□□□□ -2.19
PRE4YFR050C EFM4P40516 257 aa1.39□□□□□ -2.19
PRE4YFR050C PFS2P42841 465 aaKnown RBP1.39□□□□□ -2.19
PRE4YFR050C CIN2P46670 268 aa1.39□□□□□ -2.19
PRE4YFR050C YML6P51998 286 aa1.39□□□□□ -2.19
PRE4YFR050C INP1Q03694 420 aa1.39□□□□□ -2.19
PRE4YFR050C RRB1Q04225 511 aaKnown RBP1.39□□□□□ -2.19
PRE4YFR050C SLD7Q08457 257 aa1.39□□□□□ -2.19
PRE4YFR050C RRP42Q12277 265 aaPredicted RBP1.39□□□□□ -2.19
PRE4YFR050C TPI1P00942 248 aaKnown RBP1.38□□□□□ -2.19
PRE4YFR050C RRP7P25368 297 aaPredicted RBP1.38□□□□□ -2.19
PRE4YFR050C INO2P26798 304 aa1.38□□□□□ -2.19
PRE4YFR050C BMH1P29311 267 aaKnown RBP1.38□□□□□ -2.19
PRE4YFR050C TOA2P32774 122 aa1.38□□□□□ -2.19
PRE4YFR050C TAF6P53040 516 aa1.38□□□□□ -2.19
PRE4YFR050C SLT2Q00772 484 aa1.38□□□□□ -2.19
PRE4YFR050C MRX11Q03079 207 aa1.38□□□□□ -2.19
PRE4YFR050C ATP16Q12165 160 aa1.38□□□□□ -2.19
PRE4YFR050C RFM1Q12192 310 aa1.38□□□□□ -2.19
PRE4YFR050C TIR4Q12218 487 aaPredicted RBP1.38□□□□□ -2.19
PRE4YFR050C YOR029WQ12243 111 aa1.38□□□□□ -2.19
PRE4YFR050C MCT1Q12283 360 aa1.38□□□□□ -2.19
PRE4YFR050C RPL23AP0CX41 137 aaKnown RBP1.37□□□□□ -2.19
PRE4YFR050C RPL23BP0CX42 137 aaKnown RBP1.37□□□□□ -2.19
PRE4YFR050C RPS16AP0CX51 143 aaKnown RBP1.37□□□□□ -2.19
PRE4YFR050C RPS16BP0CX52 143 aaKnown RBP1.37□□□□□ -2.19
PRE4YFR050C GCD2P12754 651 aaPredicted RBP1.37□□□□□ -2.19
PRE4YFR050C KSS1P14681 368 aa1.37□□□□□ -2.19
PRE4YFR050C ANB1P19211 157 aa1.37□□□□□ -2.19
PRE4YFR050C GDI1P39958 451 aaKnown RBP1.37□□□□□ -2.19
PRE4YFR050C SLM1P40485 686 aa1.37□□□□□ -2.19
PRE4YFR050C STB1P42845 420 aa1.37□□□□□ -2.19
PRE4YFR050C KEG1P43614 200 aa1.37□□□□□ -2.19
PRE4YFR050C GET1P53192 235 aa1.37□□□□□ -2.19
PRE4YFR050C RRP36Q12481 300 aaPredicted RBP1.37□□□□□ -2.19
PRE4YFR050C CDC37P06101 506 aaKnown RBP1.36□□□□□ -2.19
PRE4YFR050C MIR1P23641 311 aaKnown RBP1.36□□□□□ -2.19
PRE4YFR050C PBN1P25580 416 aa1.36□□□□□ -2.19
PRE4YFR050C YKR015CP36111 568 aa1.36□□□□□ -2.19
PRE4YFR050C MLH1P38920 769 aa1.36□□□□□ -2.19
PRE4YFR050C RRT13P40042 185 aa1.36□□□□□ -2.19
PRE4YFR050C MEP1P40260 492 aa1.36□□□□□ -2.19
PRE4YFR050C LYS12P40495 371 aaKnown RBP1.36□□□□□ -2.19
PRE4YFR050C SNL1P40548 159 aa1.36□□□□□ -2.19
PRE4YFR050C YIR035CP40579 254 aa1.36□□□□□ -2.19
PRE4YFR050C VPS55P47111 140 aa1.36□□□□□ -2.19
PRE4YFR050C RMI1Q02685 241 aa1.36□□□□□ -2.19
PRE4YFR050C MRX8Q05473 314 aa1.36□□□□□ -2.19
PRE4YFR050C HOR7Q05827 59 aa1.36□□□□□ -2.19
PRE4YFR050C BRX1Q08235 291 aaKnown RBP1.36□□□□□ -2.19
PRE4YFR050C PEX27Q08580 376 aa1.36□□□□□ -2.19
PRE4YFR050C RTC5Q12108 567 aaKnown RBP1.36□□□□□ -2.19
PRE4YFR050C YPL245WQ12179 454 aaKnown RBP1.36□□□□□ -2.19
PRE4YFR050C YDR010CQ12426 110 aa1.36□□□□□ -2.19
PRE4YFR050C STE2D6VTK4 431 aa1.35□□□□□ -2.19
PRE4YFR050C COX2P00410 251 aa1.35□□□□□ -2.19
PRE4YFR050C MSK1P32048 576 aa1.35□□□□□ -2.19
PRE4YFR050C MDL1P33310 695 aa1.35□□□□□ -2.19
PRE4YFR050C PRX1P34227 261 aaKnown RBP1.35□□□□□ -2.19
PRE4YFR050C SMP1P38128 452 aa1.35□□□□□ -2.19
PRE4YFR050C ECM33P38248 429 aaKnown RBP1.35□□□□□ -2.19
PRE4YFR050C EFM1P38732 585 aa1.35□□□□□ -2.19
PRE4YFR050C YNL200CP40165 246 aaKnown RBP1.35□□□□□ -2.19
PRE4YFR050C MRPL49P40858 161 aaPredicted RBP1.35□□□□□ -2.19
PRE4YFR050C CAB4P53332 305 aa1.35□□□□□ -2.19
PRE4YFR050C YNL260CP53846 198 aa1.35□□□□□ -2.19
PRE4YFR050C RSR1P13856 272 aa1.34□□□□□ -2.19
PRE4YFR050C MRPS28P21771 286 aa1.34□□□□□ -2.19
PRE4YFR050C DBR1P24309 405 aaKnown RBP1.34□□□□□ -2.19
PRE4YFR050C GDH2P33327 1092 aaKnown RBP1.34□□□□□ -2.19
PRE4YFR050C SHE1P38200 338 aa1.34□□□□□ -2.19
PRE4YFR050C PEX32P38292 413 aa1.34□□□□□ -2.19
PRE4YFR050C YNL320WP42840 284 aa1.34□□□□□ -2.19
PRE4YFR050C HIT1P46973 164 aa1.34□□□□□ -2.19
PRE4YFR050C SNX4P47057 423 aa1.34□□□□□ -2.19
PRE4YFR050C YHP1Q04116 353 aa1.34□□□□□ -2.19
PRE4YFR050C PRM3Q08931 133 aa1.34□□□□□ -2.19
PRE4YFR050C YAL067W-AQ8TGK6 75 aa1.34□□□□□ -2.19
PRE4YFR050C YMR105W-AQ8TGS8 64 aa1.34□□□□□ -2.19
PRE4YFR050C UBA3Q99344 299 aa1.34□□□□□ -2.19
PRE4YFR050C SGA1P08019 549 aa1.33□□□□□ -2.2
PRE4YFR050C BGL2P15703 313 aaKnown RBP1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 64 ms