RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C SNX4P47057 423 aa1.96□□□□□ -2.1
VAB2YEL005C YGL159WP53110 370 aa1.96□□□□□ -2.1
VAB2YEL005C YGL034CP53186 121 aa1.96□□□□□ -2.1
VAB2YEL005C YMR279CQ03263 540 aa1.96□□□□□ -2.1
VAB2YEL005C SSQ1Q05931 657 aaPredicted RBP1.96□□□□□ -2.1
VAB2YEL005C RUD3Q12234 484 aaKnown RBP1.96□□□□□ -2.1
VAB2YEL005C EMC6Q12431 108 aa1.96□□□□□ -2.1
VAB2YEL005C DSF1P0CX08 502 aa1.95□□□□□ -2.1
VAB2YEL005C YNR073CP0CX09 502 aa1.95□□□□□ -2.1
VAB2YEL005C TCD1P38756 429 aa1.95□□□□□ -2.1
VAB2YEL005C HAM1P47119 197 aaKnown RBP1.95□□□□□ -2.1
VAB2YEL005C COS6P53344 381 aa1.95□□□□□ -2.1
VAB2YEL005C INM2Q05533 292 aa1.95□□□□□ -2.1
VAB2YEL005C SEI1Q06058 285 aa1.95□□□□□ -2.1
VAB2YEL005C YLR030WQ07967 263 aa1.95□□□□□ -2.1
VAB2YEL005C HTL1Q9URQ5 78 aa1.95□□□□□ -2.1
VAB2YEL005C DRS2P39524 1355 aa1.95□□□□□ -2.1
VAB2YEL005C YHR032W-AP0C5N6 59 aa1.94□□□□□ -2.1
VAB2YEL005C EHD3P28817 500 aa1.94□□□□□ -2.1
VAB2YEL005C YKL075CP36083 450 aa1.94□□□□□ -2.1
VAB2YEL005C YHR125WP38831 101 aa1.94□□□□□ -2.1
VAB2YEL005C YAR068WP39564 161 aa1.94□□□□□ -2.1
VAB2YEL005C YER085CP40058 173 aa1.94□□□□□ -2.1
VAB2YEL005C NSA1P53136 463 aaPredicted RBP1.94□□□□□ -2.1
VAB2YEL005C GTR2P53290 341 aa1.94□□□□□ -2.1
VAB2YEL005C YML108WQ03759 105 aa1.94□□□□□ -2.1
VAB2YEL005C YPR172WQ06608 200 aa1.94□□□□□ -2.1
VAB2YEL005C YOR020W-AQ3E824 90 aa1.94□□□□□ -2.1
VAB2YEL005C Q0255P03881 472 aa1.93□□□□□ -2.1
VAB2YEL005C RPO26P20435 155 aa1.93□□□□□ -2.1
VAB2YEL005C RPL24BP24000 155 aaKnown RBP1.93□□□□□ -2.1
VAB2YEL005C BMH2P34730 273 aaKnown RBP1.93□□□□□ -2.1
VAB2YEL005C CAB4P53332 305 aa1.93□□□□□ -2.1
VAB2YEL005C RSM10Q03201 203 aa1.93□□□□□ -2.1
VAB2YEL005C ATG39Q06159 398 aa1.93□□□□□ -2.1
VAB2YEL005C RPL9AP05738 191 aaKnown RBP1.92□□□□□ -2.1
VAB2YEL005C YCR102CP25608 368 aa1.92□□□□□ -2.1
VAB2YEL005C PPA2P28239 310 aa1.92□□□□□ -2.1
VAB2YEL005C SSO1P32867 290 aa1.92□□□□□ -2.1
VAB2YEL005C CAT5P41735 233 aa1.92□□□□□ -2.1
VAB2YEL005C RPC17P47076 161 aa1.92□□□□□ -2.1
VAB2YEL005C RPL9BP51401 191 aaKnown RBP1.92□□□□□ -2.1
VAB2YEL005C YNL046WP53956 172 aa1.92□□□□□ -2.1
VAB2YEL005C YMD8Q03697 442 aa1.92□□□□□ -2.1
VAB2YEL005C CGI121Q03705 181 aaKnown RBP1.92□□□□□ -2.1
VAB2YEL005C YML096WQ04489 525 aa1.92□□□□□ -2.1
VAB2YEL005C AKR2Q12013 749 aa1.92□□□□□ -2.1
VAB2YEL005C MATALPHA1P0CY06 175 aa1.91□□□□□ -2.1
VAB2YEL005C HMLALPHA1P0CY07 175 aa1.91□□□□□ -2.1
VAB2YEL005C CDC10P25342 322 aaKnown RBP1.91□□□□□ -2.1
VAB2YEL005C RPS5P26783 225 aaKnown RBP1.91□□□□□ -2.1
VAB2YEL005C VPS21P36017 210 aaKnown RBP1.91□□□□□ -2.1
VAB2YEL005C GRE3P38715 327 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
VAB2YEL005C PRE6P40303 254 aaKnown RBP1.91□□□□□ -2.1
VAB2YEL005C YIL001WP40560 513 aa1.91□□□□□ -2.1
VAB2YEL005C GCN20P43535 752 aaKnown RBP1.91□□□□□ -2.1
VAB2YEL005C MCM22P47167 239 aa1.91□□□□□ -2.1
VAB2YEL005C TRM9P49957 279 aa1.91□□□□□ -2.1
VAB2YEL005C HEM25Q07534 307 aa1.91□□□□□ -2.1
VAB2YEL005C FCY2P17064 533 aa1.9□□□□□ -2.11
VAB2YEL005C ERD2P18414 219 aa1.9□□□□□ -2.11
VAB2YEL005C YPT52P36018 234 aaKnown RBP1.9□□□□□ -2.11
VAB2YEL005C YOR062CP36025 268 aa1.9□□□□□ -2.11
VAB2YEL005C RIB1P38066 345 aa1.9□□□□□ -2.11
VAB2YEL005C RSM25P40496 264 aa1.9□□□□□ -2.11
VAB2YEL005C DAN1P47178 298 aa1.9□□□□□ -2.11
VAB2YEL005C NOP13P53883 403 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
VAB2YEL005C ATO3Q12359 275 aa1.9□□□□□ -2.11
VAB2YEL005C COX5AP00424 153 aa1.89□□□□□ -2.11
VAB2YEL005C SPT3P06844 337 aa1.89□□□□□ -2.11
VAB2YEL005C BCY1P07278 416 aaKnown RBP1.89□□□□□ -2.11
VAB2YEL005C VMA6P32366 345 aaKnown RBP1.89□□□□□ -2.11
VAB2YEL005C DOA4P32571 926 aa1.89□□□□□ -2.11
VAB2YEL005C RTR1P40084 226 aaPredicted RBP1.89□□□□□ -2.11
VAB2YEL005C YRB1P41920 201 aaKnown RBP1.89□□□□□ -2.11
VAB2YEL005C OTU1P43558 301 aa1.89□□□□□ -2.11
VAB2YEL005C CIS3P47001 227 aa1.89□□□□□ -2.11
VAB2YEL005C YJR056CP47115 236 aa1.89□□□□□ -2.11
VAB2YEL005C ABF2Q02486 183 aa1.89□□□□□ -2.11
VAB2YEL005C SIR4P11978 1358 aa1.88□□□□□ -2.11
VAB2YEL005C MSW1P04803 379 aa1.88□□□□□ -2.11
VAB2YEL005C RHO1P06780 209 aaKnown RBP1.88□□□□□ -2.11
VAB2YEL005C SNA3P14359 133 aa1.88□□□□□ -2.11
VAB2YEL005C NRG2P38082 220 aa1.88□□□□□ -2.11
VAB2YEL005C MIC26P50087 233 aa1.88□□□□□ -2.11
VAB2YEL005C FYV6P53913 173 aa1.88□□□□□ -2.11
VAB2YEL005C RNH1Q04740 348 aa1.88□□□□□ -2.11
VAB2YEL005C MSA1Q08471 629 aa1.88□□□□□ -2.11
VAB2YEL005C NIP7Q08962 181 aaKnown RBP1.88□□□□□ -2.11
VAB2YEL005C YHR086W-AQ3E746 53 aa1.88□□□□□ -2.11
VAB2YEL005C LSO2Q3E772 92 aaKnown RBP1.88□□□□□ -2.11
VAB2YEL005C NCB2Q92317 146 aa1.88□□□□□ -2.11
VAB2YEL005C RPL28P02406 149 aaKnown RBP1.87□□□□□ -2.11
VAB2YEL005C NHP6BP11633 99 aaKnown RBP1.87□□□□□ -2.11
VAB2YEL005C FBA1P14540 359 aaKnown RBP1.87□□□□□ -2.11
VAB2YEL005C YBR063CP38083 404 aa1.87□□□□□ -2.11
VAB2YEL005C MIC12P38341 106 aa1.87□□□□□ -2.11
VAB2YEL005C RPF1P38805 295 aaKnown RBP1.87□□□□□ -2.11
VAB2YEL005C YJR149WP47177 404 aa1.87□□□□□ -2.11
VAB2YEL005C YGR219WP53307 113 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms